RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
MBD1-222ENST00000590208 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.09
MBD1-222ENST00000590208 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.09
MBD1-222ENST00000590208 FAT1Q14517 4588 aa8.21□□□□□ -1.1
MBD1-222ENST00000590208 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
MBD1-222ENST00000590208 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
MBD1-222ENST00000590208 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
MBD1-222ENST00000590208 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
MBD1-222ENST00000590208 APOBP04114 4563 aaKnown RBP8.14□□□□□ -1.11
MBD1-222ENST00000590208 A0A1B0GVY2 172 aa8.13□□□□□ -1.11
MBD1-222ENST00000590208 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
MBD1-222ENST00000590208 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
MBD1-222ENST00000590208 HSPG2P98160 4391 aa8.03□□□□□ -1.12
MBD1-222ENST00000590208 KRTAP10-8P60410 259 aa8.02□□□□□ -1.13
MBD1-222ENST00000590208 RYR1P21817 5038 aa8.01□□□□□ -1.13
MBD1-222ENST00000590208 NDUFAF8A1L188 74 aa8□□□□□ -1.13
MBD1-222ENST00000590208 KRTAP10-4P60372 401 aaPredicted RBP8□□□□□ -1.13
MBD1-222ENST00000590208 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
MBD1-222ENST00000590208 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
MBD1-222ENST00000590208 S4R3F8 94 aa7.99□□□□□ -1.13
MBD1-222ENST00000590208 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
MBD1-222ENST00000590208 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
MBD1-222ENST00000590208 FAT3Q8TDW7 4589 aa7.92□□□□□ -1.14
MBD1-222ENST00000590208 LRP1Q07954 4544 aaKnown RBP7.91□□□□□ -1.14
MBD1-222ENST00000590208 BIRC6Q9NR09 4857 aa7.9□□□□□ -1.15
MBD1-222ENST00000590208 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
MBD1-222ENST00000590208 ABCA13Q86UQ4 5058 aa7.84□□□□□ -1.15
MBD1-222ENST00000590208 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
MBD1-222ENST00000590208 XP32Q5T750 250 aa7.81□□□□□ -1.16
MBD1-222ENST00000590208 Q5VSD8 79 aa7.8□□□□□ -1.16
MBD1-222ENST00000590208 TNXBP22105 4242 aa7.77□□□□□ -1.17
MBD1-222ENST00000590208 HERC2O95714 4834 aa7.75□□□□□ -1.17
MBD1-222ENST00000590208 A0A0A0MQY5 61 aa7.74□□□□□ -1.17
MBD1-222ENST00000590208 LPAP08519 4548 aa7.73□□□□□ -1.17
MBD1-222ENST00000590208 PCLOQ9Y6V0 5065 aa7.72□□□□□ -1.17
MBD1-222ENST00000590208 M0QZ58 72 aa7.63□□□□□ -1.19
MBD1-222ENST00000590208 LRP2P98164 4655 aa7.57□□□□□ -1.2
MBD1-222ENST00000590208 HERC1Q15751 4861 aa7.56□□□□□ -1.2
MBD1-222ENST00000590208 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
MBD1-222ENST00000590208 R4GN34 69 aa7.45□□□□□ -1.22
MBD1-222ENST00000590208 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
MBD1-222ENST00000590208 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.23
MBD1-222ENST00000590208 J3QL48 77 aa7.38□□□□□ -1.23
MBD1-222ENST00000590208 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
MBD1-222ENST00000590208 HMCN2Q8NDA2 5059 aa7.18□□□□□ -1.26
MBD1-222ENST00000590208 UBR4Q5T4S7 5183 aa7.15□□□□□ -1.26
MBD1-222ENST00000590208 MUC2Q02817 5179 aa7.15□□□□□ -1.27
MBD1-222ENST00000590208 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
MBD1-222ENST00000590208 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
MBD1-222ENST00000590208 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
MBD1-222ENST00000590208 PP632Q6XCG6 107 aa7.1□□□□□ -1.27
MBD1-222ENST00000590208 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
MBD1-222ENST00000590208 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
MBD1-222ENST00000590208 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
MBD1-222ENST00000590208 TNP1P09430 55 aa6.86□□□□□ -1.31
MBD1-222ENST00000590208 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
MBD1-222ENST00000590208 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
MBD1-222ENST00000590208 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
MBD1-222ENST00000590208 FLGP20930 4061 aaPredicted RBP6.69□□□□□ -1.34
MBD1-222ENST00000590208 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
MBD1-222ENST00000590208 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
MBD1-222ENST00000590208 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
MBD1-222ENST00000590208 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
MBD1-222ENST00000590208 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
MBD1-222ENST00000590208 M0R2T5 61 aa6.32□□□□□ -1.4
MBD1-222ENST00000590208 MT1HP80294 61 aa6.29□□□□□ -1.4
MBD1-222ENST00000590208 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
MBD1-222ENST00000590208 INE1O15225 51 aa6.24□□□□□ -1.41
MBD1-222ENST00000590208 MT1FP04733 61 aa6.21□□□□□ -1.42
MBD1-222ENST00000590208 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
MBD1-222ENST00000590208 MT2AP02795 61 aa6.16□□□□□ -1.42
MBD1-222ENST00000590208 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
MBD1-222ENST00000590208 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
MBD1-222ENST00000590208 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
MBD1-222ENST00000590208 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
MBD1-222ENST00000590208 MT1XP80297 61 aa6.11□□□□□ -1.43
MBD1-222ENST00000590208 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
MBD1-222ENST00000590208 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
MBD1-222ENST00000590208 MT1BP07438 61 aa6.06□□□□□ -1.44
MBD1-222ENST00000590208 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
MBD1-222ENST00000590208 USH2AO75445 5202 aa6.04□□□□□ -1.44
MBD1-222ENST00000590208 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
MBD1-222ENST00000590208 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
MBD1-222ENST00000590208 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
MBD1-222ENST00000590208 KMT2DO14686 5537 aa5.8□□□□□ -1.48
MBD1-222ENST00000590208 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
MBD1-222ENST00000590208 LCE2BO14633 110 aa5.75□□□□□ -1.49
MBD1-222ENST00000590208 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
MBD1-222ENST00000590208 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
MBD1-222ENST00000590208 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
MBD1-222ENST00000590208 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
MBD1-222ENST00000590208 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
MBD1-222ENST00000590208 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
MBD1-222ENST00000590208 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
MBD1-222ENST00000590208 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
MBD1-222ENST00000590208 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
MBD1-222ENST00000590208 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
MBD1-222ENST00000590208 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
MBD1-222ENST00000590208 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
MBD1-222ENST00000590208 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms