RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LINC00208Q96KT6 92 aa6.64□□□□□ -1.35
MBD1-220ENST00000589758 S4R3F8 94 aa6.63□□□□□ -1.35
MBD1-220ENST00000589758 MP68P56378 58 aa6.62□□□□□ -1.35
MBD1-220ENST00000589758 KRTAP6-3Q3LI67 103 aa6.62□□□□□ -1.35
MBD1-220ENST00000589758 C5orf47Q569G3 176 aa6.61□□□□□ -1.35
MBD1-220ENST00000589758 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
MBD1-220ENST00000589758 LCA10Q71F78 164 aa6.58□□□□□ -1.36
MBD1-220ENST00000589758 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
MBD1-220ENST00000589758 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
MBD1-220ENST00000589758 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
MBD1-220ENST00000589758 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
MBD1-220ENST00000589758 H3BPC8 53 aa6.51□□□□□ -1.37
MBD1-220ENST00000589758 Q5VV11 94 aa6.49□□□□□ -1.37
MBD1-220ENST00000589758 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
MBD1-220ENST00000589758 TRAV7A0A075B6U4 112 aa6.47□□□□□ -1.37
MBD1-220ENST00000589758 A6NN06 94 aa6.47□□□□□ -1.37
MBD1-220ENST00000589758 SMIM20Q8N5G0 67 aa6.46□□□□□ -1.38
MBD1-220ENST00000589758 A8MUN3 132 aa6.45□□□□□ -1.38
MBD1-220ENST00000589758 MT1BP07438 61 aa6.45□□□□□ -1.38
MBD1-220ENST00000589758 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
MBD1-220ENST00000589758 NEBP20929 6669 aa6.42□□□□□ -1.38
MBD1-220ENST00000589758 NDUFC1O43677 76 aa6.42□□□□□ -1.38
MBD1-220ENST00000589758 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
MBD1-220ENST00000589758 DMAC1Q96GE9 116 aa6.36□□□□□ -1.39
MBD1-220ENST00000589758 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
MBD1-220ENST00000589758 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
MBD1-220ENST00000589758 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
MBD1-220ENST00000589758 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
MBD1-220ENST00000589758 SERP2Q8N6R1 65 aa6.32□□□□□ -1.4
MBD1-220ENST00000589758 C20orf197Q8N268 126 aa6.31□□□□□ -1.4
MBD1-220ENST00000589758 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
MBD1-220ENST00000589758 ACYP2P14621 99 aa6.26□□□□□ -1.41
MBD1-220ENST00000589758 H0YAA0 97 aa6.25□□□□□ -1.41
MBD1-220ENST00000589758 KRTAP5-9P26371 169 aa6.2□□□□□ -1.42
MBD1-220ENST00000589758 CHKB-CPT1BH3BT56 60 aa6.19□□□□□ -1.42
MBD1-220ENST00000589758 COX7CP15954 63 aa6.19□□□□□ -1.42
MBD1-220ENST00000589758 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
MBD1-220ENST00000589758 P0C880 135 aa6.15□□□□□ -1.42
MBD1-220ENST00000589758 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
MBD1-220ENST00000589758 ANAPC13Q9BS18 74 aa6.1□□□□□ -1.43
MBD1-220ENST00000589758 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
MBD1-220ENST00000589758 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
MBD1-220ENST00000589758 KMT2DO14686 5537 aa6.09□□□□□ -1.44
MBD1-220ENST00000589758 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
MBD1-220ENST00000589758 R4GN34 69 aa6.08□□□□□ -1.44
MBD1-220ENST00000589758 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
MBD1-220ENST00000589758 M0QZ58 72 aa6.06□□□□□ -1.44
MBD1-220ENST00000589758 H7BZZ5 65 aa6.04□□□□□ -1.44
MBD1-220ENST00000589758 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
MBD1-220ENST00000589758 COA5Q86WW8 74 aa6.04□□□□□ -1.44
MBD1-220ENST00000589758 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
MBD1-220ENST00000589758 MT1XP80297 61 aa6.02□□□□□ -1.45
MBD1-220ENST00000589758 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
MBD1-220ENST00000589758 CCDC179H3BU77 68 aa5.98□□□□□ -1.45
MBD1-220ENST00000589758 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
MBD1-220ENST00000589758 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
MBD1-220ENST00000589758 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
MBD1-220ENST00000589758 SPRR2EP22531 72 aa5.92□□□□□ -1.46
MBD1-220ENST00000589758 SPRR2BP35325 72 aa5.92□□□□□ -1.46
MBD1-220ENST00000589758 SPRR2AP35326 72 aa5.92□□□□□ -1.46
MBD1-220ENST00000589758 SEC61GP60059 68 aa5.86□□□□□ -1.47
MBD1-220ENST00000589758 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.47
MBD1-220ENST00000589758 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
MBD1-220ENST00000589758 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
MBD1-220ENST00000589758 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
MBD1-220ENST00000589758 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
MBD1-220ENST00000589758 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
MBD1-220ENST00000589758 ATP5EP56381 51 aaPredicted RBP5.79□□□□□ -1.48
MBD1-220ENST00000589758 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
MBD1-220ENST00000589758 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
MBD1-220ENST00000589758 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
MBD1-220ENST00000589758 A0A1B0GU33 70 aa5.73□□□□□ -1.49
MBD1-220ENST00000589758 A0A1B0GU69 56 aa5.73□□□□□ -1.49
MBD1-220ENST00000589758 SPRR2DP22532 72 aa5.73□□□□□ -1.49
MBD1-220ENST00000589758 TMEM258P61165 79 aa5.73□□□□□ -1.49
MBD1-220ENST00000589758 SPATA8Q6RVD6 105 aa5.73□□□□□ -1.49
MBD1-220ENST00000589758 A0A0D9SG42 100 aa5.71□□□□□ -1.5
MBD1-220ENST00000589758 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
MBD1-220ENST00000589758 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
MBD1-220ENST00000589758 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
MBD1-220ENST00000589758 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
MBD1-220ENST00000589758 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
MBD1-220ENST00000589758 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
MBD1-220ENST00000589758 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
MBD1-220ENST00000589758 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
MBD1-220ENST00000589758 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
MBD1-220ENST00000589758 A8MU10 97 aa5.55□□□□□ -1.52
MBD1-220ENST00000589758 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
MBD1-220ENST00000589758 PCP4P48539 62 aa5.43□□□□□ -1.54
MBD1-220ENST00000589758 UQCR11O14957 56 aa5.42□□□□□ -1.54
MBD1-220ENST00000589758 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
MBD1-220ENST00000589758 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
MBD1-220ENST00000589758 PSPHP1O15172 72 aa5.37□□□□□ -1.55
MBD1-220ENST00000589758 V9GYY9 64 aa5.37□□□□□ -1.55
MBD1-220ENST00000589758 MT1EP04732 61 aa5.35□□□□□ -1.55
MBD1-220ENST00000589758 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
MBD1-220ENST00000589758 Q1T7F1 81 aa5.34□□□□□ -1.55
MBD1-220ENST00000589758 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
MBD1-220ENST00000589758 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
MBD1-220ENST00000589758 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms