RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 FCGBPQ9Y6R7 5405 aaPredicted RBP8.04□□□□□ -1.12
H3F3B-207ENST00000589417 KLKP1Q107X0 134 aa8.03□□□□□ -1.12
H3F3B-207ENST00000589417 K7ERU9 68 aa8□□□□□ -1.13
H3F3B-207ENST00000589417 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
H3F3B-207ENST00000589417 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
H3F3B-207ENST00000589417 SCGB1A1P11684 91 aa7.98□□□□□ -1.13
H3F3B-207ENST00000589417 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
H3F3B-207ENST00000589417 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
H3F3B-207ENST00000589417 NDUFC1O43677 76 aa7.95□□□□□ -1.14
H3F3B-207ENST00000589417 MT-ATP8P03928 68 aa7.93□□□□□ -1.14
H3F3B-207ENST00000589417 H0YAA0 97 aa7.92□□□□□ -1.14
H3F3B-207ENST00000589417 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
H3F3B-207ENST00000589417 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
H3F3B-207ENST00000589417 SMIM20Q8N5G0 67 aa7.87□□□□□ -1.15
H3F3B-207ENST00000589417 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
H3F3B-207ENST00000589417 TRAV7A0A075B6U4 112 aa7.84□□□□□ -1.15
H3F3B-207ENST00000589417 MT1BP07438 61 aa7.84□□□□□ -1.15
H3F3B-207ENST00000589417 Q5VV11 94 aa7.81□□□□□ -1.16
H3F3B-207ENST00000589417 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
H3F3B-207ENST00000589417 MACF1Q9UPN3 7388 aaKnown RBP7.77□□□□□ -1.17
H3F3B-207ENST00000589417 ADM2Q7Z4H4 148 aa7.73□□□□□ -1.17
H3F3B-207ENST00000589417 ACYP2P14621 99 aa7.67□□□□□ -1.18
H3F3B-207ENST00000589417 A6NN06 94 aa7.65□□□□□ -1.18
H3F3B-207ENST00000589417 SYNE2Q8WXH0 6885 aaKnown RBP7.64□□□□□ -1.19
H3F3B-207ENST00000589417 KRTAP10-5P60370 271 aa7.64□□□□□ -1.19
H3F3B-207ENST00000589417 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
H3F3B-207ENST00000589417 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
H3F3B-207ENST00000589417 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
H3F3B-207ENST00000589417 P0C880 135 aa7.59□□□□□ -1.19
H3F3B-207ENST00000589417 SNURFQ9Y675 71 aa7.59□□□□□ -1.19
H3F3B-207ENST00000589417 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
H3F3B-207ENST00000589417 KRTAP6-3Q3LI67 103 aa7.54□□□□□ -1.2
H3F3B-207ENST00000589417 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
H3F3B-207ENST00000589417 R4GN34 69 aa7.54□□□□□ -1.2
H3F3B-207ENST00000589417 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
H3F3B-207ENST00000589417 M0QZ58 72 aa7.46□□□□□ -1.22
H3F3B-207ENST00000589417 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
H3F3B-207ENST00000589417 COX7CP15954 63 aa7.42□□□□□ -1.22
H3F3B-207ENST00000589417 MT1XP80297 61 aa7.39□□□□□ -1.23
H3F3B-207ENST00000589417 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
H3F3B-207ENST00000589417 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
H3F3B-207ENST00000589417 COA5Q86WW8 74 aa7.3□□□□□ -1.24
H3F3B-207ENST00000589417 H7BZZ5 65 aa7.29□□□□□ -1.24
H3F3B-207ENST00000589417 KRTAP5-9P26371 169 aa7.28□□□□□ -1.24
H3F3B-207ENST00000589417 CYSTM1Q9H1C7 97 aa7.25□□□□□ -1.25
H3F3B-207ENST00000589417 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
H3F3B-207ENST00000589417 NEBP20929 6669 aa7.2□□□□□ -1.26
H3F3B-207ENST00000589417 MUC12Q9UKN1 5478 aa7.18□□□□□ -1.26
H3F3B-207ENST00000589417 ANAPC13Q9BS18 74 aa7.18□□□□□ -1.26
H3F3B-207ENST00000589417 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
H3F3B-207ENST00000589417 KMT2DO14686 5537 aa7.14□□□□□ -1.27
H3F3B-207ENST00000589417 SEC61GP60059 68 aa7.1□□□□□ -1.27
H3F3B-207ENST00000589417 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
H3F3B-207ENST00000589417 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
H3F3B-207ENST00000589417 CCDC179H3BU77 68 aa7.04□□□□□ -1.28
H3F3B-207ENST00000589417 MDN1Q9NU22 5596 aa7.03□□□□□ -1.28
H3F3B-207ENST00000589417 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
H3F3B-207ENST00000589417 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
H3F3B-207ENST00000589417 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
H3F3B-207ENST00000589417 A0A1B0GU33 70 aa6.99□□□□□ -1.29
H3F3B-207ENST00000589417 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
H3F3B-207ENST00000589417 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
H3F3B-207ENST00000589417 ATP5EP56381 51 aaPredicted RBP6.96□□□□□ -1.3
H3F3B-207ENST00000589417 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
H3F3B-207ENST00000589417 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
H3F3B-207ENST00000589417 A0A1B0GU69 56 aa6.91□□□□□ -1.3
H3F3B-207ENST00000589417 A0A0D9SG42 100 aa6.88□□□□□ -1.31
H3F3B-207ENST00000589417 SPRR2EP22531 72 aa6.85□□□□□ -1.31
H3F3B-207ENST00000589417 SPRR2BP35325 72 aa6.85□□□□□ -1.31
H3F3B-207ENST00000589417 SPRR2AP35326 72 aa6.85□□□□□ -1.31
H3F3B-207ENST00000589417 KRTAP20-1Q3LI63 56 aa6.85□□□□□ -1.31
H3F3B-207ENST00000589417 LCE1AQ5T7P2 110 aa6.85□□□□□ -1.31
H3F3B-207ENST00000589417 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
H3F3B-207ENST00000589417 TMEM258P61165 79 aa6.82□□□□□ -1.32
H3F3B-207ENST00000589417 SMIM26A0A096LP01 95 aa6.81□□□□□ -1.32
H3F3B-207ENST00000589417 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
H3F3B-207ENST00000589417 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
H3F3B-207ENST00000589417 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
H3F3B-207ENST00000589417 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
H3F3B-207ENST00000589417 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
H3F3B-207ENST00000589417 A8MU10 97 aa6.7□□□□□ -1.34
H3F3B-207ENST00000589417 SPRR2DP22532 72 aa6.63□□□□□ -1.35
H3F3B-207ENST00000589417 KRTAP19-7Q3SYF9 63 aa6.61□□□□□ -1.35
H3F3B-207ENST00000589417 UQCR11O14957 56 aa6.55□□□□□ -1.36
H3F3B-207ENST00000589417 KRTAP2-2Q9BYT5 123 aa6.55□□□□□ -1.36
H3F3B-207ENST00000589417 KRTAP2-1Q9BYU5 128 aa6.55□□□□□ -1.36
H3F3B-207ENST00000589417 MT1EP04732 61 aa6.54□□□□□ -1.36
H3F3B-207ENST00000589417 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
H3F3B-207ENST00000589417 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
H3F3B-207ENST00000589417 TNP1P09430 55 aa6.47□□□□□ -1.37
H3F3B-207ENST00000589417 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
H3F3B-207ENST00000589417 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
H3F3B-207ENST00000589417 V9GYY9 64 aa6.45□□□□□ -1.38
H3F3B-207ENST00000589417 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
H3F3B-207ENST00000589417 Q1T7F1 81 aa6.42□□□□□ -1.38
H3F3B-207ENST00000589417 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
H3F3B-207ENST00000589417 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
H3F3B-207ENST00000589417 MT1GP13640 62 aa6.35□□□□□ -1.39
H3F3B-207ENST00000589417 PSPHP1O15172 72 aa6.32□□□□□ -1.4
H3F3B-207ENST00000589417 MT1LQ93083 61 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms