RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 RYR1P21817 5038 aa6.53□□□□□ -1.36
AP3D1-206ENST00000589223 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
AP3D1-206ENST00000589223 TNXBP22105 4242 aa6.5□□□□□ -1.37
AP3D1-206ENST00000589223 LRP2P98164 4655 aa6.45□□□□□ -1.38
AP3D1-206ENST00000589223 A8MUU9 505 aa6.45□□□□□ -1.38
AP3D1-206ENST00000589223 ABCA13Q86UQ4 5058 aa6.45□□□□□ -1.38
AP3D1-206ENST00000589223 Q5VSD8 79 aa6.44□□□□□ -1.38
AP3D1-206ENST00000589223 K7ERS5 55 aa6.43□□□□□ -1.38
AP3D1-206ENST00000589223 KRTAP3-1Q9BYR8 98 aa6.43□□□□□ -1.38
AP3D1-206ENST00000589223 H0YAA0 97 aa6.42□□□□□ -1.38
AP3D1-206ENST00000589223 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
AP3D1-206ENST00000589223 A0A1B0GU33 70 aa6.41□□□□□ -1.38
AP3D1-206ENST00000589223 P0C880 135 aa6.38□□□□□ -1.39
AP3D1-206ENST00000589223 A0A0D9SG42 100 aa6.35□□□□□ -1.39
AP3D1-206ENST00000589223 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
AP3D1-206ENST00000589223 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
AP3D1-206ENST00000589223 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
AP3D1-206ENST00000589223 MUC2Q02817 5179 aa6.29□□□□□ -1.4
AP3D1-206ENST00000589223 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
AP3D1-206ENST00000589223 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
AP3D1-206ENST00000589223 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
AP3D1-206ENST00000589223 XP32Q5T750 250 aa6.22□□□□□ -1.41
AP3D1-206ENST00000589223 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
AP3D1-206ENST00000589223 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
AP3D1-206ENST00000589223 MT1HL1P0DM35 61 aa6.17□□□□□ -1.42
AP3D1-206ENST00000589223 HERC2O95714 4834 aa6.14□□□□□ -1.43
AP3D1-206ENST00000589223 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
AP3D1-206ENST00000589223 TPRXLQ17RH7 258 aa6.12□□□□□ -1.43
AP3D1-206ENST00000589223 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
AP3D1-206ENST00000589223 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
AP3D1-206ENST00000589223 A0A0A0MQY5 61 aa6.09□□□□□ -1.43
AP3D1-206ENST00000589223 S4R3F8 94 aa6.08□□□□□ -1.44
AP3D1-206ENST00000589223 HERC1Q15751 4861 aa6.08□□□□□ -1.44
AP3D1-206ENST00000589223 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
AP3D1-206ENST00000589223 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
AP3D1-206ENST00000589223 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
AP3D1-206ENST00000589223 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
AP3D1-206ENST00000589223 FAT4Q6V0I7 4981 aa5.96□□□□□ -1.46
AP3D1-206ENST00000589223 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
AP3D1-206ENST00000589223 J3QL48 77 aa5.91□□□□□ -1.46
AP3D1-206ENST00000589223 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.47
AP3D1-206ENST00000589223 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
AP3D1-206ENST00000589223 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
AP3D1-206ENST00000589223 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
AP3D1-206ENST00000589223 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
AP3D1-206ENST00000589223 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
AP3D1-206ENST00000589223 M0QZ58 72 aa5.81□□□□□ -1.48
AP3D1-206ENST00000589223 R4GN34 69 aa5.8□□□□□ -1.48
AP3D1-206ENST00000589223 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
AP3D1-206ENST00000589223 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
AP3D1-206ENST00000589223 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
AP3D1-206ENST00000589223 SEC61BP60468 96 aaKnown RBP5.65□□□□□ -1.51
AP3D1-206ENST00000589223 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
AP3D1-206ENST00000589223 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
AP3D1-206ENST00000589223 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
AP3D1-206ENST00000589223 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
AP3D1-206ENST00000589223 M0R2T5 61 aa5.44□□□□□ -1.54
AP3D1-206ENST00000589223 USH2AO75445 5202 aa5.33□□□□□ -1.56
AP3D1-206ENST00000589223 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
AP3D1-206ENST00000589223 TNP1P09430 55 aa5.25□□□□□ -1.57
AP3D1-206ENST00000589223 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
AP3D1-206ENST00000589223 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.57
AP3D1-206ENST00000589223 KRTAP10-10P60014 251 aa5.21□□□□□ -1.58
AP3D1-206ENST00000589223 MT1HP80294 61 aa5.2□□□□□ -1.58
AP3D1-206ENST00000589223 KMT2DO14686 5537 aa5.17□□□□□ -1.58
AP3D1-206ENST00000589223 MT1FP04733 61 aa5.16□□□□□ -1.58
AP3D1-206ENST00000589223 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
AP3D1-206ENST00000589223 MT2AP02795 61 aa5.09□□□□□ -1.59
AP3D1-206ENST00000589223 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
AP3D1-206ENST00000589223 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
AP3D1-206ENST00000589223 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
AP3D1-206ENST00000589223 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
AP3D1-206ENST00000589223 MT1BP07438 61 aa4.88□□□□□ -1.63
AP3D1-206ENST00000589223 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
AP3D1-206ENST00000589223 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
AP3D1-206ENST00000589223 MT1XP80297 61 aa4.83□□□□□ -1.64
AP3D1-206ENST00000589223 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
AP3D1-206ENST00000589223 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
AP3D1-206ENST00000589223 LCE2BO14633 110 aa4.76□□□□□ -1.65
AP3D1-206ENST00000589223 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
AP3D1-206ENST00000589223 INE1O15225 51 aa4.73□□□□□ -1.65
AP3D1-206ENST00000589223 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
AP3D1-206ENST00000589223 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
AP3D1-206ENST00000589223 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
AP3D1-206ENST00000589223 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
AP3D1-206ENST00000589223 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
AP3D1-206ENST00000589223 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
AP3D1-206ENST00000589223 LCE2AQ5TA79 106 aaPredicted RBP4.64□□□□□ -1.67
AP3D1-206ENST00000589223 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
AP3D1-206ENST00000589223 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
AP3D1-206ENST00000589223 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
AP3D1-206ENST00000589223 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
AP3D1-206ENST00000589223 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
AP3D1-206ENST00000589223 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
AP3D1-206ENST00000589223 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
AP3D1-206ENST00000589223 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
AP3D1-206ENST00000589223 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
AP3D1-206ENST00000589223 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
AP3D1-206ENST00000589223 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
AP3D1-206ENST00000589223 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms