RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
RFX1-203ENST00000588520 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.86□□□□□ -1.15
RFX1-203ENST00000588520 H3BPC8 53 aa7.86□□□□□ -1.15
RFX1-203ENST00000588520 IMUPQ9GZP8 106 aa7.82□□□□□ -1.16
RFX1-203ENST00000588520 NDUFC1O43677 76 aa7.81□□□□□ -1.16
RFX1-203ENST00000588520 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
RFX1-203ENST00000588520 KLKP1Q107X0 134 aa7.81□□□□□ -1.16
RFX1-203ENST00000588520 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
RFX1-203ENST00000588520 K7ERU9 68 aa7.78□□□□□ -1.16
RFX1-203ENST00000588520 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
RFX1-203ENST00000588520 H0YAA0 97 aa7.77□□□□□ -1.17
RFX1-203ENST00000588520 MACF1Q9UPN3 7388 aaKnown RBP7.75□□□□□ -1.17
RFX1-203ENST00000588520 KRTAP9-7A8MTY7 169 aa7.74□□□□□ -1.17
RFX1-203ENST00000588520 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
RFX1-203ENST00000588520 Q5VV11 94 aa7.71□□□□□ -1.18
RFX1-203ENST00000588520 SMIM20Q8N5G0 67 aa7.7□□□□□ -1.18
RFX1-203ENST00000588520 DMAC1Q96GE9 116 aa7.66□□□□□ -1.18
RFX1-203ENST00000588520 MT-ATP8P03928 68 aa7.65□□□□□ -1.18
RFX1-203ENST00000588520 MT1BP07438 61 aa7.65□□□□□ -1.18
RFX1-203ENST00000588520 SYNE2Q8WXH0 6885 aaKnown RBP7.63□□□□□ -1.19
RFX1-203ENST00000588520 TRAV7A0A075B6U4 112 aa7.62□□□□□ -1.19
RFX1-203ENST00000588520 ADM2Q7Z4H4 148 aa7.59□□□□□ -1.19
RFX1-203ENST00000588520 A6NN06 94 aa7.57□□□□□ -1.2
RFX1-203ENST00000588520 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
RFX1-203ENST00000588520 ACYP2P14621 99 aa7.51□□□□□ -1.21
RFX1-203ENST00000588520 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
RFX1-203ENST00000588520 KRTAP6-3Q3LI67 103 aa7.44□□□□□ -1.22
RFX1-203ENST00000588520 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
RFX1-203ENST00000588520 R4GN34 69 aa7.43□□□□□ -1.22
RFX1-203ENST00000588520 SERP2Q8N6R1 65 aa7.4□□□□□ -1.22
RFX1-203ENST00000588520 P0C880 135 aa7.39□□□□□ -1.23
RFX1-203ENST00000588520 SPANXA2-OT1Q8N9U9 137 aa7.39□□□□□ -1.23
RFX1-203ENST00000588520 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
RFX1-203ENST00000588520 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
RFX1-203ENST00000588520 CHKB-CPT1BH3BT56 60 aa7.35□□□□□ -1.23
RFX1-203ENST00000588520 M0QZ58 72 aa7.34□□□□□ -1.23
RFX1-203ENST00000588520 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
RFX1-203ENST00000588520 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
RFX1-203ENST00000588520 MT1XP80297 61 aa7.21□□□□□ -1.26
RFX1-203ENST00000588520 COX7CP15954 63 aa7.19□□□□□ -1.26
RFX1-203ENST00000588520 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
RFX1-203ENST00000588520 NEBP20929 6669 aa7.18□□□□□ -1.26
RFX1-203ENST00000588520 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
RFX1-203ENST00000588520 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
RFX1-203ENST00000588520 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
RFX1-203ENST00000588520 COA5Q86WW8 74 aa7.1□□□□□ -1.27
RFX1-203ENST00000588520 PCP4P48539 62 aa7.09□□□□□ -1.27
RFX1-203ENST00000588520 H7BZZ5 65 aa7.05□□□□□ -1.28
RFX1-203ENST00000588520 SEC61GP60059 68 aa7.02□□□□□ -1.29
RFX1-203ENST00000588520 KMT2DO14686 5537 aa7.02□□□□□ -1.29
RFX1-203ENST00000588520 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
RFX1-203ENST00000588520 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
RFX1-203ENST00000588520 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
RFX1-203ENST00000588520 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
RFX1-203ENST00000588520 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
RFX1-203ENST00000588520 MDN1Q9NU22 5596 aa6.93□□□□□ -1.3
RFX1-203ENST00000588520 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
RFX1-203ENST00000588520 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
RFX1-203ENST00000588520 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
RFX1-203ENST00000588520 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
RFX1-203ENST00000588520 A0A1B0GU33 70 aa6.83□□□□□ -1.32
RFX1-203ENST00000588520 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
RFX1-203ENST00000588520 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
RFX1-203ENST00000588520 KRTAP20-1Q3LI63 56 aa6.81□□□□□ -1.32
RFX1-203ENST00000588520 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
RFX1-203ENST00000588520 SPRR2EP22531 72 aa6.78□□□□□ -1.32
RFX1-203ENST00000588520 SPRR2BP35325 72 aa6.78□□□□□ -1.32
RFX1-203ENST00000588520 SPRR2AP35326 72 aa6.78□□□□□ -1.32
RFX1-203ENST00000588520 A0A1B0GU69 56 aa6.77□□□□□ -1.33
RFX1-203ENST00000588520 CCDC179H3BU77 68 aa6.77□□□□□ -1.33
RFX1-203ENST00000588520 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
RFX1-203ENST00000588520 A0A0D9SG42 100 aa6.74□□□□□ -1.33
RFX1-203ENST00000588520 LCE1AQ5T7P2 110 aa6.72□□□□□ -1.33
RFX1-203ENST00000588520 SMIM26A0A096LP01 95 aa6.69□□□□□ -1.34
RFX1-203ENST00000588520 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
RFX1-203ENST00000588520 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
RFX1-203ENST00000588520 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
RFX1-203ENST00000588520 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
RFX1-203ENST00000588520 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
RFX1-203ENST00000588520 TMEM258P61165 79 aa6.63□□□□□ -1.35
RFX1-203ENST00000588520 SPRR2DP22532 72 aa6.56□□□□□ -1.36
RFX1-203ENST00000588520 LINC01558Q9Y6Z2 57 aa6.56□□□□□ -1.36
RFX1-203ENST00000588520 A8MU10 97 aa6.5□□□□□ -1.37
RFX1-203ENST00000588520 KRTAP2-2Q9BYT5 123 aa6.48□□□□□ -1.37
RFX1-203ENST00000588520 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
RFX1-203ENST00000588520 KRTAP19-7Q3SYF9 63 aa6.45□□□□□ -1.38
RFX1-203ENST00000588520 UQCR11O14957 56 aa6.41□□□□□ -1.38
RFX1-203ENST00000588520 MT1EP04732 61 aa6.39□□□□□ -1.39
RFX1-203ENST00000588520 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
RFX1-203ENST00000588520 TNP1P09430 55 aa6.36□□□□□ -1.39
RFX1-203ENST00000588520 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
RFX1-203ENST00000588520 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
RFX1-203ENST00000588520 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
RFX1-203ENST00000588520 V9GYY9 64 aa6.31□□□□□ -1.4
RFX1-203ENST00000588520 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
RFX1-203ENST00000588520 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
RFX1-203ENST00000588520 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
RFX1-203ENST00000588520 MT1GP13640 62 aa6.23□□□□□ -1.41
RFX1-203ENST00000588520 Q1T7F1 81 aa6.21□□□□□ -1.42
RFX1-203ENST00000588520 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms