RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
LINC01539-201ENST00000587904 Q5W150 140 aa5.41□□□□□ -1.54
LINC01539-201ENST00000587904 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
LINC01539-201ENST00000587904 RYR1P21817 5038 aa5.39□□□□□ -1.55
LINC01539-201ENST00000587904 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
LINC01539-201ENST00000587904 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
LINC01539-201ENST00000587904 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
LINC01539-201ENST00000587904 Q5VSD8 79 aa5.36□□□□□ -1.55
LINC01539-201ENST00000587904 IGKV2-30P06310 120 aa5.35□□□□□ -1.55
LINC01539-201ENST00000587904 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
LINC01539-201ENST00000587904 HSPG2P98160 4391 aa5.34□□□□□ -1.55
LINC01539-201ENST00000587904 ABCA13Q86UQ4 5058 aa5.34□□□□□ -1.56
LINC01539-201ENST00000587904 H0YAA0 97 aa5.33□□□□□ -1.56
LINC01539-201ENST00000587904 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
LINC01539-201ENST00000587904 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
LINC01539-201ENST00000587904 K7ERS5 55 aa5.3□□□□□ -1.56
LINC01539-201ENST00000587904 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
LINC01539-201ENST00000587904 IGKV2D-30A0A075B6S6 120 aa5.28□□□□□ -1.56
LINC01539-201ENST00000587904 Q8N1X5 172 aa5.27□□□□□ -1.57
LINC01539-201ENST00000587904 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
LINC01539-201ENST00000587904 KRTAP4-5Q9BYR2 181 aa5.25□□□□□ -1.57
LINC01539-201ENST00000587904 A0A1B0GU33 70 aa5.24□□□□□ -1.57
LINC01539-201ENST00000587904 TNXBP22105 4242 aa5.23□□□□□ -1.57
LINC01539-201ENST00000587904 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
LINC01539-201ENST00000587904 FLG2Q5D862 2391 aaPredicted RBP5.23□□□□□ -1.57
LINC01539-201ENST00000587904 FAT3Q8TDW7 4589 aa5.22□□□□□ -1.57
LINC01539-201ENST00000587904 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
LINC01539-201ENST00000587904 H1FX-AS1Q4G0G2 97 aa5.21□□□□□ -1.58
LINC01539-201ENST00000587904 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
LINC01539-201ENST00000587904 C9orf92A6NGG3 77 aa5.19□□□□□ -1.58
LINC01539-201ENST00000587904 HERC1Q15751 4861 aa5.17□□□□□ -1.58
LINC01539-201ENST00000587904 MT1HL1P0DM35 61 aa5.16□□□□□ -1.58
LINC01539-201ENST00000587904 TPRXLQ17RH7 258 aa5.16□□□□□ -1.58
LINC01539-201ENST00000587904 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
LINC01539-201ENST00000587904 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
LINC01539-201ENST00000587904 RPL37P61927 97 aaKnown RBP5.07□□□□□ -1.6
LINC01539-201ENST00000587904 COX6B2Q6YFQ2 88 aa5.06□□□□□ -1.6
LINC01539-201ENST00000587904 XP32Q5T750 250 aa5.05□□□□□ -1.6
LINC01539-201ENST00000587904 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
LINC01539-201ENST00000587904 HMCN2Q8NDA2 5059 aa4.94□□□□□ -1.62
LINC01539-201ENST00000587904 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
LINC01539-201ENST00000587904 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
LINC01539-201ENST00000587904 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
LINC01539-201ENST00000587904 LRP2P98164 4655 aa4.84□□□□□ -1.63
LINC01539-201ENST00000587904 S4R3F8 94 aa4.82□□□□□ -1.64
LINC01539-201ENST00000587904 LPAP08519 4548 aa4.81□□□□□ -1.64
LINC01539-201ENST00000587904 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
LINC01539-201ENST00000587904 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
LINC01539-201ENST00000587904 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
LINC01539-201ENST00000587904 A0A0D9SG42 100 aa4.79□□□□□ -1.64
LINC01539-201ENST00000587904 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
LINC01539-201ENST00000587904 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
LINC01539-201ENST00000587904 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
LINC01539-201ENST00000587904 KRTAP12-2P59991 146 aa4.71□□□□□ -1.65
LINC01539-201ENST00000587904 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
LINC01539-201ENST00000587904 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
LINC01539-201ENST00000587904 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
LINC01539-201ENST00000587904 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
LINC01539-201ENST00000587904 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
LINC01539-201ENST00000587904 M0QZ58 72 aa4.54□□□□□ -1.68
LINC01539-201ENST00000587904 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.53□□□□□ -1.68
LINC01539-201ENST00000587904 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
LINC01539-201ENST00000587904 MUC2Q02817 5179 aa4.52□□□□□ -1.69
LINC01539-201ENST00000587904 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
LINC01539-201ENST00000587904 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
LINC01539-201ENST00000587904 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
LINC01539-201ENST00000587904 INE1O15225 51 aa4.45□□□□□ -1.7
LINC01539-201ENST00000587904 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
LINC01539-201ENST00000587904 R4GN34 69 aa4.42□□□□□ -1.7
LINC01539-201ENST00000587904 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
LINC01539-201ENST00000587904 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
LINC01539-201ENST00000587904 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
LINC01539-201ENST00000587904 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
LINC01539-201ENST00000587904 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
LINC01539-201ENST00000587904 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
LINC01539-201ENST00000587904 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
LINC01539-201ENST00000587904 MT1HP80294 61 aa4.33□□□□□ -1.72
LINC01539-201ENST00000587904 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
LINC01539-201ENST00000587904 M0R2T5 61 aa4.31□□□□□ -1.72
LINC01539-201ENST00000587904 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
LINC01539-201ENST00000587904 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
LINC01539-201ENST00000587904 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
LINC01539-201ENST00000587904 MT2AP02795 61 aa4.2□□□□□ -1.74
LINC01539-201ENST00000587904 KRTAP19-1Q8IUB9 90 aa4.18□□□□□ -1.74
LINC01539-201ENST00000587904 MT1FP04733 61 aa4.17□□□□□ -1.74
LINC01539-201ENST00000587904 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
LINC01539-201ENST00000587904 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
LINC01539-201ENST00000587904 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
LINC01539-201ENST00000587904 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
LINC01539-201ENST00000587904 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
LINC01539-201ENST00000587904 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
LINC01539-201ENST00000587904 TNP1P09430 55 aa4.04□□□□□ -1.76
LINC01539-201ENST00000587904 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
LINC01539-201ENST00000587904 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
LINC01539-201ENST00000587904 MT1BP07438 61 aa3.98□□□□□ -1.77
LINC01539-201ENST00000587904 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
LINC01539-201ENST00000587904 MT1XP80297 61 aa3.89□□□□□ -1.79
LINC01539-201ENST00000587904 USH2AO75445 5202 aa3.87□□□□□ -1.79
LINC01539-201ENST00000587904 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
LINC01539-201ENST00000587904 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms