RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 K7ERS5 55 aa10.17□□□□□ -0.78
MBD1-216ENST00000587605 KRTAP3-3Q9BYR6 98 aa10.15□□□□□ -0.79
MBD1-216ENST00000587605 S4R3F8 94 aa10.15□□□□□ -0.79
MBD1-216ENST00000587605 RYR1P21817 5038 aa10.13□□□□□ -0.79
MBD1-216ENST00000587605 LINC01554Q52M75 96 aa10.12□□□□□ -0.79
MBD1-216ENST00000587605 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
MBD1-216ENST00000587605 MT1HL1P0DM35 61 aa10.1□□□□□ -0.79
MBD1-216ENST00000587605 KRTAP10-6P60371 365 aaPredicted RBP10.07□□□□□ -0.8
MBD1-216ENST00000587605 DMBT1Q9UGM3 2413 aaPredicted RBP10.05□□□□□ -0.8
MBD1-216ENST00000587605 KRTAP3-2Q9BYR7 98 aa10.01□□□□□ -0.81
MBD1-216ENST00000587605 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
MBD1-216ENST00000587605 TPRXLQ17RH7 258 aa9.99□□□□□ -0.81
MBD1-216ENST00000587605 KRTAP25-1Q3LHN0 102 aa9.94□□□□□ -0.82
MBD1-216ENST00000587605 RYR3Q15413 4870 aa9.92□□□□□ -0.82
MBD1-216ENST00000587605 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
MBD1-216ENST00000587605 ROMO1P60602 79 aa9.86□□□□□ -0.83
MBD1-216ENST00000587605 MYCBP2O75592 4640 aa9.85□□□□□ -0.83
MBD1-216ENST00000587605 P0C880 135 aa9.83□□□□□ -0.84
MBD1-216ENST00000587605 KIAA1109Q2LD37 5005 aa9.81□□□□□ -0.84
MBD1-216ENST00000587605 A0A0D9SG42 100 aa9.8□□□□□ -0.84
MBD1-216ENST00000587605 M0QZ58 72 aa9.7□□□□□ -0.86
MBD1-216ENST00000587605 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
MBD1-216ENST00000587605 LRP2P98164 4655 aa9.61□□□□□ -0.87
MBD1-216ENST00000587605 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
MBD1-216ENST00000587605 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
MBD1-216ENST00000587605 CRIPTQ9P021 101 aa9.58□□□□□ -0.88
MBD1-216ENST00000587605 LPAP08519 4548 aa9.53□□□□□ -0.88
MBD1-216ENST00000587605 EPPK1P58107 5090 aaKnown RBP9.53□□□□□ -0.88
MBD1-216ENST00000587605 SPINT4Q6UDR6 99 aa9.52□□□□□ -0.89
MBD1-216ENST00000587605 KRTAP4-5Q9BYR2 181 aa9.52□□□□□ -0.89
MBD1-216ENST00000587605 J3QL48 77 aa9.42□□□□□ -0.9
MBD1-216ENST00000587605 R4GN34 69 aa9.39□□□□□ -0.91
MBD1-216ENST00000587605 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
MBD1-216ENST00000587605 MUC17Q685J3 4493 aa9.34□□□□□ -0.91
MBD1-216ENST00000587605 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
MBD1-216ENST00000587605 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
MBD1-216ENST00000587605 KRTAP19-2Q3LHN2 52 aa9.21□□□□□ -0.93
MBD1-216ENST00000587605 LORP23490 312 aaPredicted RBP9.13□□□□□ -0.95
MBD1-216ENST00000587605 HERC2O95714 4834 aa9.12□□□□□ -0.95
MBD1-216ENST00000587605 H3BS24 57 aa9.03□□□□□ -0.96
MBD1-216ENST00000587605 KRTAP15-1Q3LI76 137 aa9.02□□□□□ -0.97
MBD1-216ENST00000587605 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
MBD1-216ENST00000587605 FLGP20930 4061 aaPredicted RBP8.95□□□□□ -0.98
MBD1-216ENST00000587605 CAMK2N1Q7Z7J9 78 aa8.9□□□□□ -0.98
MBD1-216ENST00000587605 PP632Q6XCG6 107 aa8.87□□□□□ -0.99
MBD1-216ENST00000587605 HERC1Q15751 4861 aa8.8□□□□□ -1
MBD1-216ENST00000587605 NDUFAF8A1L188 74 aa8.69□□□□□ -1.02
MBD1-216ENST00000587605 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
MBD1-216ENST00000587605 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
MBD1-216ENST00000587605 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
MBD1-216ENST00000587605 KRTAP23-1A1A580 65 aa8.64□□□□□ -1.03
MBD1-216ENST00000587605 TNP1P09430 55 aa8.62□□□□□ -1.03
MBD1-216ENST00000587605 MUC2Q02817 5179 aa8.59□□□□□ -1.03
MBD1-216ENST00000587605 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
MBD1-216ENST00000587605 PCLOQ9Y6V0 5065 aa8.52□□□□□ -1.05
MBD1-216ENST00000587605 M0R2T5 61 aa8.46□□□□□ -1.05
MBD1-216ENST00000587605 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
MBD1-216ENST00000587605 MT1HP80294 61 aa8.44□□□□□ -1.06
MBD1-216ENST00000587605 LUZP6Q538Z0 58 aa8.33□□□□□ -1.08
MBD1-216ENST00000587605 MT2AP02795 61 aa8.31□□□□□ -1.08
MBD1-216ENST00000587605 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
MBD1-216ENST00000587605 MT1FP04733 61 aa8.27□□□□□ -1.09
MBD1-216ENST00000587605 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
MBD1-216ENST00000587605 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
MBD1-216ENST00000587605 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
MBD1-216ENST00000587605 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
MBD1-216ENST00000587605 SPRR5A0A1B0GTR4 108 aa8.17□□□□□ -1.1
MBD1-216ENST00000587605 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
MBD1-216ENST00000587605 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
MBD1-216ENST00000587605 MT1BP07438 61 aa8.02□□□□□ -1.13
MBD1-216ENST00000587605 KRTAP8-1Q8IUC2 63 aa7.97□□□□□ -1.13
MBD1-216ENST00000587605 KRTAP10-5P60370 271 aa7.96□□□□□ -1.13
MBD1-216ENST00000587605 MT1XP80297 61 aa7.95□□□□□ -1.14
MBD1-216ENST00000587605 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
MBD1-216ENST00000587605 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
MBD1-216ENST00000587605 KRTAP10-12P60413 245 aa7.84□□□□□ -1.16
MBD1-216ENST00000587605 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
MBD1-216ENST00000587605 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
MBD1-216ENST00000587605 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
MBD1-216ENST00000587605 LCE2BO14633 110 aa7.54□□□□□ -1.2
MBD1-216ENST00000587605 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
MBD1-216ENST00000587605 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
MBD1-216ENST00000587605 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
MBD1-216ENST00000587605 INE1O15225 51 aa7.22□□□□□ -1.25
MBD1-216ENST00000587605 KRTAP19-4Q3LI73 84 aa7.19□□□□□ -1.26
MBD1-216ENST00000587605 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
MBD1-216ENST00000587605 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
MBD1-216ENST00000587605 USH2AO75445 5202 aa7.1□□□□□ -1.27
MBD1-216ENST00000587605 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
MBD1-216ENST00000587605 KMT2DO14686 5537 aa6.93□□□□□ -1.3
MBD1-216ENST00000587605 MT1EP04732 61 aa6.91□□□□□ -1.3
MBD1-216ENST00000587605 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
MBD1-216ENST00000587605 MT1LQ93083 61 aa6.9□□□□□ -1.3
MBD1-216ENST00000587605 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
MBD1-216ENST00000587605 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
MBD1-216ENST00000587605 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
MBD1-216ENST00000587605 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
MBD1-216ENST00000587605 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
MBD1-216ENST00000587605 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
MBD1-216ENST00000587605 LCE2DQ5TA82 110 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms