RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 A8MUU9 505 aa8.7□□□□□ -1.02
GHDC-207ENST00000587427 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
GHDC-207ENST00000587427 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
GHDC-207ENST00000587427 FAT3Q8TDW7 4589 aa8.66□□□□□ -1.02
GHDC-207ENST00000587427 A0A1B0GU33 70 aa8.64□□□□□ -1.03
GHDC-207ENST00000587427 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
GHDC-207ENST00000587427 KRTAP25-1Q3LHN0 102 aa8.62□□□□□ -1.03
GHDC-207ENST00000587427 C20orf166-AS1Q96NR2 134 aa8.62□□□□□ -1.03
GHDC-207ENST00000587427 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
GHDC-207ENST00000587427 C9orf92A6NGG3 77 aa8.58□□□□□ -1.04
GHDC-207ENST00000587427 TNXBP22105 4242 aa8.58□□□□□ -1.04
GHDC-207ENST00000587427 CRIPTQ9P021 101 aa8.54□□□□□ -1.04
GHDC-207ENST00000587427 HERC1Q15751 4861 aa8.5□□□□□ -1.05
GHDC-207ENST00000587427 ROMO1P60602 79 aa8.49□□□□□ -1.05
GHDC-207ENST00000587427 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
GHDC-207ENST00000587427 K7ERS5 55 aa8.44□□□□□ -1.06
GHDC-207ENST00000587427 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
GHDC-207ENST00000587427 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
GHDC-207ENST00000587427 J3QL48 77 aa8.42□□□□□ -1.06
GHDC-207ENST00000587427 KRTAP10-8P60410 259 aa8.41□□□□□ -1.06
GHDC-207ENST00000587427 P0C880 135 aa8.29□□□□□ -1.08
GHDC-207ENST00000587427 KRTAP10-6P60371 365 aaPredicted RBP8.27□□□□□ -1.09
GHDC-207ENST00000587427 RPL37P61927 97 aaKnown RBP8.27□□□□□ -1.09
GHDC-207ENST00000587427 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
GHDC-207ENST00000587427 A0A0D9SG42 100 aa8.26□□□□□ -1.09
GHDC-207ENST00000587427 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
GHDC-207ENST00000587427 LPAP08519 4548 aa8.2□□□□□ -1.1
GHDC-207ENST00000587427 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
GHDC-207ENST00000587427 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
GHDC-207ENST00000587427 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
GHDC-207ENST00000587427 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
GHDC-207ENST00000587427 LRP2P98164 4655 aa8.12□□□□□ -1.11
GHDC-207ENST00000587427 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
GHDC-207ENST00000587427 S4R3F8 94 aa8.11□□□□□ -1.11
GHDC-207ENST00000587427 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
GHDC-207ENST00000587427 UBR4Q5T4S7 5183 aa8□□□□□ -1.13
GHDC-207ENST00000587427 XP32Q5T750 250 aa7.99□□□□□ -1.13
GHDC-207ENST00000587427 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
GHDC-207ENST00000587427 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
GHDC-207ENST00000587427 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
GHDC-207ENST00000587427 RNF213Q63HN8 5207 aa7.87□□□□□ -1.15
GHDC-207ENST00000587427 MUC2Q02817 5179 aa7.86□□□□□ -1.15
GHDC-207ENST00000587427 M0QZ58 72 aa7.83□□□□□ -1.16
GHDC-207ENST00000587427 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
GHDC-207ENST00000587427 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
GHDC-207ENST00000587427 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
GHDC-207ENST00000587427 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
GHDC-207ENST00000587427 R4GN34 69 aa7.52□□□□□ -1.21
GHDC-207ENST00000587427 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
GHDC-207ENST00000587427 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
GHDC-207ENST00000587427 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
GHDC-207ENST00000587427 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
GHDC-207ENST00000587427 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
GHDC-207ENST00000587427 FLGP20930 4061 aaPredicted RBP7.25□□□□□ -1.25
GHDC-207ENST00000587427 MT1HP80294 61 aa7.17□□□□□ -1.26
GHDC-207ENST00000587427 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
GHDC-207ENST00000587427 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
GHDC-207ENST00000587427 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
GHDC-207ENST00000587427 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
GHDC-207ENST00000587427 M0R2T5 61 aa7.08□□□□□ -1.28
GHDC-207ENST00000587427 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
GHDC-207ENST00000587427 TNP1P09430 55 aa6.97□□□□□ -1.29
GHDC-207ENST00000587427 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
GHDC-207ENST00000587427 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
GHDC-207ENST00000587427 MT2AP02795 61 aa6.79□□□□□ -1.32
GHDC-207ENST00000587427 MT1FP04733 61 aa6.76□□□□□ -1.33
GHDC-207ENST00000587427 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
GHDC-207ENST00000587427 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
GHDC-207ENST00000587427 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
GHDC-207ENST00000587427 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
GHDC-207ENST00000587427 USH2AO75445 5202 aa6.61□□□□□ -1.35
GHDC-207ENST00000587427 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
GHDC-207ENST00000587427 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
GHDC-207ENST00000587427 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
GHDC-207ENST00000587427 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
GHDC-207ENST00000587427 LCE2BO14633 110 aa6.54□□□□□ -1.36
GHDC-207ENST00000587427 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
GHDC-207ENST00000587427 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
GHDC-207ENST00000587427 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
GHDC-207ENST00000587427 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
GHDC-207ENST00000587427 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
GHDC-207ENST00000587427 INE1O15225 51 aa6.3□□□□□ -1.4
GHDC-207ENST00000587427 MT1BP07438 61 aa6.29□□□□□ -1.4
GHDC-207ENST00000587427 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
GHDC-207ENST00000587427 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
GHDC-207ENST00000587427 MT1XP80297 61 aa6.24□□□□□ -1.41
GHDC-207ENST00000587427 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
GHDC-207ENST00000587427 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.42
GHDC-207ENST00000587427 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
GHDC-207ENST00000587427 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
GHDC-207ENST00000587427 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
GHDC-207ENST00000587427 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
GHDC-207ENST00000587427 KMT2DO14686 5537 aa5.93□□□□□ -1.46
GHDC-207ENST00000587427 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
GHDC-207ENST00000587427 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
GHDC-207ENST00000587427 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
GHDC-207ENST00000587427 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
GHDC-207ENST00000587427 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
GHDC-207ENST00000587427 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
GHDC-207ENST00000587427 KRTAP4-8Q9BYQ9 185 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms