RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 KRTAP19-6Q3LI70 58 aa10.99□□□□□ -0.65
ERCC2-209ENST00000586856 KRTAP9-7A8MTY7 169 aa10.98□□□□□ -0.65
ERCC2-209ENST00000586856 KLKP1Q107X0 134 aa10.98□□□□□ -0.65
ERCC2-209ENST00000586856 A8MUN3 132 aa10.92□□□□□ -0.66
ERCC2-209ENST00000586856 SCGB1A1P11684 91 aa10.91□□□□□ -0.66
ERCC2-209ENST00000586856 H3BPC8 53 aa10.87□□□□□ -0.67
ERCC2-209ENST00000586856 NDUFC1O43677 76 aa10.87□□□□□ -0.67
ERCC2-209ENST00000586856 K7ERU9 68 aa10.85□□□□□ -0.67
ERCC2-209ENST00000586856 SPRR2GQ9BYE4 73 aa10.84□□□□□ -0.67
ERCC2-209ENST00000586856 MT-ATP8P03928 68 aa10.82□□□□□ -0.68
ERCC2-209ENST00000586856 IMUPQ9GZP8 106 aa10.82□□□□□ -0.68
ERCC2-209ENST00000586856 MACF1Q9UPN3 7388 aaKnown RBP10.81□□□□□ -0.68
ERCC2-209ENST00000586856 MT1BP07438 61 aa10.75□□□□□ -0.69
ERCC2-209ENST00000586856 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
ERCC2-209ENST00000586856 Q5VV11 94 aa10.74□□□□□ -0.69
ERCC2-209ENST00000586856 H0YAA0 97 aa10.73□□□□□ -0.69
ERCC2-209ENST00000586856 CRIPTQ9P021 101 aa10.72□□□□□ -0.69
ERCC2-209ENST00000586856 SYNE2Q8WXH0 6885 aaKnown RBP10.7□□□□□ -0.7
ERCC2-209ENST00000586856 DMAC1Q96GE9 116 aa10.69□□□□□ -0.7
ERCC2-209ENST00000586856 SMIM20Q8N5G0 67 aa10.65□□□□□ -0.7
ERCC2-209ENST00000586856 TRAV7A0A075B6U4 112 aa10.63□□□□□ -0.71
ERCC2-209ENST00000586856 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
ERCC2-209ENST00000586856 A6NN06 94 aa10.55□□□□□ -0.72
ERCC2-209ENST00000586856 KRTAP10-5P60370 271 aa10.45□□□□□ -0.74
ERCC2-209ENST00000586856 P0C880 135 aa10.42□□□□□ -0.74
ERCC2-209ENST00000586856 ACYP2P14621 99 aa10.42□□□□□ -0.74
ERCC2-209ENST00000586856 SNURFQ9Y675 71 aa10.42□□□□□ -0.74
ERCC2-209ENST00000586856 C20orf197Q8N268 126 aa10.4□□□□□ -0.74
ERCC2-209ENST00000586856 KRTAP6-3Q3LI67 103 aa10.36□□□□□ -0.75
ERCC2-209ENST00000586856 KRTAP3-2Q9BYR7 98 aa10.35□□□□□ -0.75
ERCC2-209ENST00000586856 SERP2Q8N6R1 65 aa10.34□□□□□ -0.75
ERCC2-209ENST00000586856 R4GN34 69 aa10.34□□□□□ -0.75
ERCC2-209ENST00000586856 M0QZ58 72 aa10.29□□□□□ -0.76
ERCC2-209ENST00000586856 SPTSSBQ8NFR3 76 aa10.28□□□□□ -0.76
ERCC2-209ENST00000586856 CHKB-CPT1BH3BT56 60 aa10.26□□□□□ -0.77
ERCC2-209ENST00000586856 SPANXA2-OT1Q8N9U9 137 aa10.25□□□□□ -0.77
ERCC2-209ENST00000586856 PLAC4Q8WY50 150 aa10.19□□□□□ -0.78
ERCC2-209ENST00000586856 LINC01554Q52M75 96 aa10.13□□□□□ -0.79
ERCC2-209ENST00000586856 MT1XP80297 61 aa10.12□□□□□ -0.79
ERCC2-209ENST00000586856 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
ERCC2-209ENST00000586856 NEBP20929 6669 aa10.07□□□□□ -0.8
ERCC2-209ENST00000586856 COX7CP15954 63 aa10.06□□□□□ -0.8
ERCC2-209ENST00000586856 MUC12Q9UKN1 5478 aa10.05□□□□□ -0.8
ERCC2-209ENST00000586856 COA5Q86WW8 74 aa9.97□□□□□ -0.81
ERCC2-209ENST00000586856 KRTAP5-9P26371 169 aa9.93□□□□□ -0.82
ERCC2-209ENST00000586856 CYSTM1Q9H1C7 97 aa9.91□□□□□ -0.82
ERCC2-209ENST00000586856 H7BZZ5 65 aa9.88□□□□□ -0.83
ERCC2-209ENST00000586856 KMT2DO14686 5537 aa9.83□□□□□ -0.84
ERCC2-209ENST00000586856 KRTAP12-2P59991 146 aa9.83□□□□□ -0.84
ERCC2-209ENST00000586856 KRTAP13-4Q3LI77 160 aa9.81□□□□□ -0.84
ERCC2-209ENST00000586856 ANAPC13Q9BS18 74 aa9.79□□□□□ -0.84
ERCC2-209ENST00000586856 MDN1Q9NU22 5596 aa9.75□□□□□ -0.85
ERCC2-209ENST00000586856 SEC61GP60059 68 aa9.7□□□□□ -0.86
ERCC2-209ENST00000586856 KRTAP8-1Q8IUC2 63 aa9.7□□□□□ -0.86
ERCC2-209ENST00000586856 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
ERCC2-209ENST00000586856 SPRR2FQ96RM1 72 aa9.68□□□□□ -0.86
ERCC2-209ENST00000586856 KRTAP10-7P60409 375 aaPredicted RBP9.66□□□□□ -0.86
ERCC2-209ENST00000586856 KRTAP20-1Q3LI63 56 aa9.62□□□□□ -0.87
ERCC2-209ENST00000586856 KRTAP4-8A0A0G2JLE6 195 aa9.61□□□□□ -0.87
ERCC2-209ENST00000586856 KRTAP4-8Q9BYQ9 185 aa9.61□□□□□ -0.87
ERCC2-209ENST00000586856 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
ERCC2-209ENST00000586856 KRTAP10-12P60413 245 aa9.6□□□□□ -0.87
ERCC2-209ENST00000586856 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
ERCC2-209ENST00000586856 A0A1B0GU33 70 aa9.53□□□□□ -0.88
ERCC2-209ENST00000586856 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
ERCC2-209ENST00000586856 A0A0D9SG42 100 aa9.52□□□□□ -0.89
ERCC2-209ENST00000586856 SPRR2EP22531 72 aa9.5□□□□□ -0.89
ERCC2-209ENST00000586856 SPRR2BP35325 72 aa9.5□□□□□ -0.89
ERCC2-209ENST00000586856 SPRR2AP35326 72 aa9.5□□□□□ -0.89
ERCC2-209ENST00000586856 A0A1B0GU69 56 aa9.45□□□□□ -0.9
ERCC2-209ENST00000586856 ATP5EP56381 51 aaPredicted RBP9.44□□□□□ -0.9
ERCC2-209ENST00000586856 LCE1AQ5T7P2 110 aa9.4□□□□□ -0.9
ERCC2-209ENST00000586856 SPINT4Q6UDR6 99 aa9.37□□□□□ -0.91
ERCC2-209ENST00000586856 KRTAP2-3P0C7H8 128 aa9.35□□□□□ -0.91
ERCC2-209ENST00000586856 KRTAP2-4Q9BYR9 128 aa9.35□□□□□ -0.91
ERCC2-209ENST00000586856 KRTAP12-1P59990 96 aa9.33□□□□□ -0.92
ERCC2-209ENST00000586856 SMIM26A0A096LP01 95 aa9.26□□□□□ -0.93
ERCC2-209ENST00000586856 TMEM258P61165 79 aa9.25□□□□□ -0.93
ERCC2-209ENST00000586856 A8MU10 97 aa9.22□□□□□ -0.93
ERCC2-209ENST00000586856 PRR15LQ9BU68 103 aa9.21□□□□□ -0.94
ERCC2-209ENST00000586856 SPRR2DP22532 72 aa9.19□□□□□ -0.94
ERCC2-209ENST00000586856 LINC01558Q9Y6Z2 57 aa9.16□□□□□ -0.94
ERCC2-209ENST00000586856 KRTAP2-2Q9BYT5 123 aa9.06□□□□□ -0.96
ERCC2-209ENST00000586856 KRTAP2-1Q9BYU5 128 aa9.06□□□□□ -0.96
ERCC2-209ENST00000586856 KRTAP19-7Q3SYF9 63 aa9.04□□□□□ -0.96
ERCC2-209ENST00000586856 MT1EP04732 61 aa8.96□□□□□ -0.98
ERCC2-209ENST00000586856 LCE3BQ5TA77 95 aa8.91□□□□□ -0.98
ERCC2-209ENST00000586856 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
ERCC2-209ENST00000586856 UQCR11O14957 56 aa8.9□□□□□ -0.98
ERCC2-209ENST00000586856 KRTAP19-5Q3LI72 72 aa8.86□□□□□ -0.99
ERCC2-209ENST00000586856 KRTAP19-3Q7Z4W3 81 aa8.84□□□□□ -0.99
ERCC2-209ENST00000586856 TNP1P09430 55 aa8.83□□□□□ -1
ERCC2-209ENST00000586856 LCE5AQ5TCM9 118 aa8.83□□□□□ -1
ERCC2-209ENST00000586856 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
ERCC2-209ENST00000586856 MIR22HGQ0VDD5 57 aa8.72□□□□□ -1.01
ERCC2-209ENST00000586856 V9GYY9 64 aa8.69□□□□□ -1.02
ERCC2-209ENST00000586856 PSPHP1O15172 72 aa8.66□□□□□ -1.02
ERCC2-209ENST00000586856 Q1T7F1 81 aa8.65□□□□□ -1.02
ERCC2-209ENST00000586856 MT1GP13640 62 aa8.63□□□□□ -1.03
ERCC2-209ENST00000586856 MT1LQ93083 61 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms