RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-203ENST00000586134 H0YAA0 97 aa5.69□□□□□ -1.5
ZNF540-203ENST00000586134 LCE2BO14633 110 aa5.69□□□□□ -1.5
ZNF540-203ENST00000586134 IGLV9-49A0A0B4J1Y8 123 aa5.67□□□□□ -1.5
ZNF540-203ENST00000586134 CIRBP-AS1Q8TBR5 109 aa5.67□□□□□ -1.5
ZNF540-203ENST00000586134 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
ZNF540-203ENST00000586134 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-203ENST00000586134 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
ZNF540-203ENST00000586134 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.51
ZNF540-203ENST00000586134 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
ZNF540-203ENST00000586134 HERC1Q15751 4861 aa5.62□□□□□ -1.51
ZNF540-203ENST00000586134 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
ZNF540-203ENST00000586134 SPACA4Q8TDM5 124 aa5.6□□□□□ -1.51
ZNF540-203ENST00000586134 A0A1B0GU33 70 aa5.6□□□□□ -1.51
ZNF540-203ENST00000586134 CRIPTQ9P021 101 aa5.59□□□□□ -1.51
ZNF540-203ENST00000586134 A0A096LNI7 61 aa5.58□□□□□ -1.52
ZNF540-203ENST00000586134 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
ZNF540-203ENST00000586134 H1FX-AS1Q4G0G2 97 aa5.56□□□□□ -1.52
ZNF540-203ENST00000586134 LRP1Q07954 4544 aaKnown RBP5.54□□□□□ -1.52
ZNF540-203ENST00000586134 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
ZNF540-203ENST00000586134 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
ZNF540-203ENST00000586134 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
ZNF540-203ENST00000586134 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
ZNF540-203ENST00000586134 SPINK1P00995 79 aa5.46□□□□□ -1.54
ZNF540-203ENST00000586134 COX6B2Q6YFQ2 88 aa5.45□□□□□ -1.54
ZNF540-203ENST00000586134 HMCN2Q8NDA2 5059 aa5.44□□□□□ -1.54
ZNF540-203ENST00000586134 TNXBP22105 4242 aa5.42□□□□□ -1.54
ZNF540-203ENST00000586134 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
ZNF540-203ENST00000586134 KRTAP10-8P60410 259 aa5.41□□□□□ -1.54
ZNF540-203ENST00000586134 RPL37P61927 97 aaKnown RBP5.4□□□□□ -1.54
ZNF540-203ENST00000586134 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
ZNF540-203ENST00000586134 LCE2AQ5TA79 106 aaPredicted RBP5.36□□□□□ -1.55
ZNF540-203ENST00000586134 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
ZNF540-203ENST00000586134 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
ZNF540-203ENST00000586134 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
ZNF540-203ENST00000586134 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
ZNF540-203ENST00000586134 LRP2P98164 4655 aa5.25□□□□□ -1.57
ZNF540-203ENST00000586134 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
ZNF540-203ENST00000586134 XP32Q5T750 250 aa5.18□□□□□ -1.58
ZNF540-203ENST00000586134 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
ZNF540-203ENST00000586134 KRTAP13-2Q52LG2 175 aa5.14□□□□□ -1.59
ZNF540-203ENST00000586134 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
ZNF540-203ENST00000586134 S4R3F8 94 aa5.14□□□□□ -1.59
ZNF540-203ENST00000586134 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
ZNF540-203ENST00000586134 LPAP08519 4548 aa5.11□□□□□ -1.59
ZNF540-203ENST00000586134 A0A0D9SG42 100 aa5.09□□□□□ -1.59
ZNF540-203ENST00000586134 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
ZNF540-203ENST00000586134 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
ZNF540-203ENST00000586134 PRO2289Q9P1D8 64 aa5.06□□□□□ -1.6
ZNF540-203ENST00000586134 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
ZNF540-203ENST00000586134 MUC17Q685J3 4493 aa5□□□□□ -1.61
ZNF540-203ENST00000586134 KRTAP12-2P59991 146 aa5□□□□□ -1.61
ZNF540-203ENST00000586134 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
ZNF540-203ENST00000586134 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
ZNF540-203ENST00000586134 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
ZNF540-203ENST00000586134 MUC2Q02817 5179 aa4.94□□□□□ -1.62
ZNF540-203ENST00000586134 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
ZNF540-203ENST00000586134 FAT4Q6V0I7 4981 aa4.87□□□□□ -1.63
ZNF540-203ENST00000586134 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
ZNF540-203ENST00000586134 INE1O15225 51 aa4.85□□□□□ -1.63
ZNF540-203ENST00000586134 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
ZNF540-203ENST00000586134 M0QZ58 72 aa4.84□□□□□ -1.63
ZNF540-203ENST00000586134 R4GN34 69 aa4.8□□□□□ -1.64
ZNF540-203ENST00000586134 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
ZNF540-203ENST00000586134 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
ZNF540-203ENST00000586134 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
ZNF540-203ENST00000586134 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
ZNF540-203ENST00000586134 MT1HP80294 61 aa4.65□□□□□ -1.67
ZNF540-203ENST00000586134 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
ZNF540-203ENST00000586134 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
ZNF540-203ENST00000586134 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
ZNF540-203ENST00000586134 M0R2T5 61 aa4.52□□□□□ -1.69
ZNF540-203ENST00000586134 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
ZNF540-203ENST00000586134 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
ZNF540-203ENST00000586134 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
ZNF540-203ENST00000586134 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
ZNF540-203ENST00000586134 MT2AP02795 61 aa4.33□□□□□ -1.72
ZNF540-203ENST00000586134 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-203ENST00000586134 TNP1P09430 55 aa4.31□□□□□ -1.72
ZNF540-203ENST00000586134 MT1FP04733 61 aa4.28□□□□□ -1.72
ZNF540-203ENST00000586134 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.73
ZNF540-203ENST00000586134 USH2AO75445 5202 aa4.27□□□□□ -1.73
ZNF540-203ENST00000586134 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
ZNF540-203ENST00000586134 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
ZNF540-203ENST00000586134 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
ZNF540-203ENST00000586134 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
ZNF540-203ENST00000586134 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
ZNF540-203ENST00000586134 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
ZNF540-203ENST00000586134 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
ZNF540-203ENST00000586134 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
ZNF540-203ENST00000586134 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
ZNF540-203ENST00000586134 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
ZNF540-203ENST00000586134 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
ZNF540-203ENST00000586134 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
ZNF540-203ENST00000586134 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
ZNF540-203ENST00000586134 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
ZNF540-203ENST00000586134 SPRR2GQ9BYE4 73 aa4□□□□□ -1.77
ZNF540-203ENST00000586134 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
ZNF540-203ENST00000586134 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
ZNF540-203ENST00000586134 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms