RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 CASC2Q6XLA1 102 aa5.71□□□□□ -1.5
LIG3-207ENST00000586119 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
LIG3-207ENST00000586119 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
LIG3-207ENST00000586119 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
LIG3-207ENST00000586119 ZCCHC13Q8WW36 166 aaKnown RBP5.67□□□□□ -1.5
LIG3-207ENST00000586119 OCR1Q9BZK8 76 aa5.67□□□□□ -1.5
LIG3-207ENST00000586119 NDUFS5O43920 106 aa5.66□□□□□ -1.5
LIG3-207ENST00000586119 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
LIG3-207ENST00000586119 TP53AIP1Q9HCN2 124 aa5.63□□□□□ -1.51
LIG3-207ENST00000586119 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
LIG3-207ENST00000586119 SPINK7P58062 85 aa5.59□□□□□ -1.51
LIG3-207ENST00000586119 C4orf26Q17RF5 130 aa5.56□□□□□ -1.52
LIG3-207ENST00000586119 H3BPC8 53 aa5.55□□□□□ -1.52
LIG3-207ENST00000586119 Q5W150 140 aa5.55□□□□□ -1.52
LIG3-207ENST00000586119 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
LIG3-207ENST00000586119 C7orf65Q6ZTY9 151 aa5.52□□□□□ -1.53
LIG3-207ENST00000586119 CYP4F30PQ9H0H9 118 aa5.52□□□□□ -1.53
LIG3-207ENST00000586119 MP68P56378 58 aa5.51□□□□□ -1.53
LIG3-207ENST00000586119 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
LIG3-207ENST00000586119 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
LIG3-207ENST00000586119 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
LIG3-207ENST00000586119 IGKV2D-30A0A075B6S6 120 aa5.48□□□□□ -1.53
LIG3-207ENST00000586119 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
LIG3-207ENST00000586119 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
LIG3-207ENST00000586119 V9GYY9 64 aa5.46□□□□□ -1.54
LIG3-207ENST00000586119 NEBP20929 6669 aa5.46□□□□□ -1.54
LIG3-207ENST00000586119 Q1T7F1 81 aa5.45□□□□□ -1.54
LIG3-207ENST00000586119 H0Y9P7 68 aa5.44□□□□□ -1.54
LIG3-207ENST00000586119 C1orf64Q8NEQ6 169 aa5.42□□□□□ -1.54
LIG3-207ENST00000586119 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
LIG3-207ENST00000586119 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
LIG3-207ENST00000586119 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
LIG3-207ENST00000586119 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
LIG3-207ENST00000586119 LINC00208Q96KT6 92 aa5.38□□□□□ -1.55
LIG3-207ENST00000586119 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
LIG3-207ENST00000586119 MT1BP07438 61 aa5.3□□□□□ -1.56
LIG3-207ENST00000586119 A6NN06 94 aa5.28□□□□□ -1.56
LIG3-207ENST00000586119 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
LIG3-207ENST00000586119 A8MUN3 132 aa5.27□□□□□ -1.57
LIG3-207ENST00000586119 COA5Q86WW8 74 aa5.24□□□□□ -1.57
LIG3-207ENST00000586119 KRTAP20-1Q3LI63 56 aa5.23□□□□□ -1.57
LIG3-207ENST00000586119 Q5VV11 94 aa5.23□□□□□ -1.57
LIG3-207ENST00000586119 PSPHP1O15172 72 aa5.22□□□□□ -1.57
LIG3-207ENST00000586119 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
LIG3-207ENST00000586119 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
LIG3-207ENST00000586119 S4R3F8 94 aa5.21□□□□□ -1.58
LIG3-207ENST00000586119 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
LIG3-207ENST00000586119 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
LIG3-207ENST00000586119 DMAC1Q96GE9 116 aa5.19□□□□□ -1.58
LIG3-207ENST00000586119 KMT2DO14686 5537 aa5.19□□□□□ -1.58
LIG3-207ENST00000586119 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
LIG3-207ENST00000586119 PRR15LQ9BU68 103 aa5.18□□□□□ -1.58
LIG3-207ENST00000586119 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
LIG3-207ENST00000586119 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
LIG3-207ENST00000586119 LCA10Q71F78 164 aa5.16□□□□□ -1.58
LIG3-207ENST00000586119 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
LIG3-207ENST00000586119 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
LIG3-207ENST00000586119 ACYP2P14621 99 aa5.14□□□□□ -1.59
LIG3-207ENST00000586119 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
LIG3-207ENST00000586119 A6NED7 52 aa5.12□□□□□ -1.59
LIG3-207ENST00000586119 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
LIG3-207ENST00000586119 H0YAA0 97 aa5.04□□□□□ -1.6
LIG3-207ENST00000586119 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
LIG3-207ENST00000586119 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
LIG3-207ENST00000586119 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
LIG3-207ENST00000586119 SEC61GP60059 68 aa5.01□□□□□ -1.61
LIG3-207ENST00000586119 A0A1B0GU69 56 aa4.97□□□□□ -1.61
LIG3-207ENST00000586119 SPRR2FQ96RM1 72 aa4.97□□□□□ -1.61
LIG3-207ENST00000586119 A8MU10 97 aa4.96□□□□□ -1.62
LIG3-207ENST00000586119 SPRR2EP22531 72 aa4.96□□□□□ -1.62
LIG3-207ENST00000586119 SPRR2BP35325 72 aa4.96□□□□□ -1.62
LIG3-207ENST00000586119 SPRR2AP35326 72 aa4.96□□□□□ -1.62
LIG3-207ENST00000586119 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
LIG3-207ENST00000586119 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
LIG3-207ENST00000586119 ADM2Q7Z4H4 148 aa4.93□□□□□ -1.62
LIG3-207ENST00000586119 UQCR11O14957 56 aa4.92□□□□□ -1.62
LIG3-207ENST00000586119 MT1XP80297 61 aa4.9□□□□□ -1.63
LIG3-207ENST00000586119 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
LIG3-207ENST00000586119 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
LIG3-207ENST00000586119 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
LIG3-207ENST00000586119 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
LIG3-207ENST00000586119 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
LIG3-207ENST00000586119 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
LIG3-207ENST00000586119 P0C880 135 aa4.84□□□□□ -1.63
LIG3-207ENST00000586119 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
LIG3-207ENST00000586119 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
LIG3-207ENST00000586119 R4GN34 69 aa4.8□□□□□ -1.64
LIG3-207ENST00000586119 SPRR2DP22532 72 aa4.78□□□□□ -1.64
LIG3-207ENST00000586119 M0QZ58 72 aa4.77□□□□□ -1.65
LIG3-207ENST00000586119 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
LIG3-207ENST00000586119 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
LIG3-207ENST00000586119 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
LIG3-207ENST00000586119 A0A1B0GU33 70 aa4.69□□□□□ -1.66
LIG3-207ENST00000586119 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
LIG3-207ENST00000586119 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
LIG3-207ENST00000586119 K7ERS5 55 aa4.65□□□□□ -1.67
LIG3-207ENST00000586119 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
LIG3-207ENST00000586119 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
LIG3-207ENST00000586119 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
LIG3-207ENST00000586119 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms