RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-205ENST00000584911 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
LINC00473-205ENST00000584911 VPS13BQ7Z7G8 4022 aa6.67□□□□□ -1.34
LINC00473-205ENST00000584911 H0YAA0 97 aa6.66□□□□□ -1.34
LINC00473-205ENST00000584911 LINC00304Q8N9R0 145 aa6.65□□□□□ -1.35
LINC00473-205ENST00000584911 ROMO1P60602 79 aa6.64□□□□□ -1.35
LINC00473-205ENST00000584911 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
LINC00473-205ENST00000584911 HERC1Q15751 4861 aa6.62□□□□□ -1.35
LINC00473-205ENST00000584911 SPINK1P00995 79 aa6.62□□□□□ -1.35
LINC00473-205ENST00000584911 KRTAP10-4P60372 401 aaPredicted RBP6.62□□□□□ -1.35
LINC00473-205ENST00000584911 KRTAP13-2Q52LG2 175 aa6.61□□□□□ -1.35
LINC00473-205ENST00000584911 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
LINC00473-205ENST00000584911 A0A1B0GU33 70 aa6.53□□□□□ -1.36
LINC00473-205ENST00000584911 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
LINC00473-205ENST00000584911 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
LINC00473-205ENST00000584911 P0C880 135 aa6.48□□□□□ -1.37
LINC00473-205ENST00000584911 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
LINC00473-205ENST00000584911 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
LINC00473-205ENST00000584911 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
LINC00473-205ENST00000584911 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
LINC00473-205ENST00000584911 CRIPTQ9P021 101 aa6.42□□□□□ -1.38
LINC00473-205ENST00000584911 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
LINC00473-205ENST00000584911 K7ERS5 55 aa6.4□□□□□ -1.39
LINC00473-205ENST00000584911 COX6B2Q6YFQ2 88 aa6.37□□□□□ -1.39
LINC00473-205ENST00000584911 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
LINC00473-205ENST00000584911 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
LINC00473-205ENST00000584911 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
LINC00473-205ENST00000584911 KRTAP10-8P60410 259 aa6.3□□□□□ -1.4
LINC00473-205ENST00000584911 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
LINC00473-205ENST00000584911 TNXBP22105 4242 aa6.27□□□□□ -1.41
LINC00473-205ENST00000584911 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
LINC00473-205ENST00000584911 RPL37P61927 97 aaKnown RBP6.26□□□□□ -1.41
LINC00473-205ENST00000584911 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
LINC00473-205ENST00000584911 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
LINC00473-205ENST00000584911 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
LINC00473-205ENST00000584911 C9orf92A6NGG3 77 aa6.22□□□□□ -1.41
LINC00473-205ENST00000584911 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
LINC00473-205ENST00000584911 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
LINC00473-205ENST00000584911 LRP2P98164 4655 aa6.16□□□□□ -1.42
LINC00473-205ENST00000584911 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
LINC00473-205ENST00000584911 A0A0D9SG42 100 aa6.13□□□□□ -1.43
LINC00473-205ENST00000584911 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
LINC00473-205ENST00000584911 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
LINC00473-205ENST00000584911 S4R3F8 94 aa6.06□□□□□ -1.44
LINC00473-205ENST00000584911 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
LINC00473-205ENST00000584911 LPAP08519 4548 aa6.03□□□□□ -1.44
LINC00473-205ENST00000584911 XP32Q5T750 250 aa5.99□□□□□ -1.45
LINC00473-205ENST00000584911 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
LINC00473-205ENST00000584911 MUC2Q02817 5179 aa5.88□□□□□ -1.47
LINC00473-205ENST00000584911 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
LINC00473-205ENST00000584911 M0QZ58 72 aa5.81□□□□□ -1.48
LINC00473-205ENST00000584911 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
LINC00473-205ENST00000584911 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
LINC00473-205ENST00000584911 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
LINC00473-205ENST00000584911 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
LINC00473-205ENST00000584911 LUZP6Q538Z0 58 aa5.68□□□□□ -1.5
LINC00473-205ENST00000584911 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
LINC00473-205ENST00000584911 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
LINC00473-205ENST00000584911 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
LINC00473-205ENST00000584911 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
LINC00473-205ENST00000584911 R4GN34 69 aa5.54□□□□□ -1.52
LINC00473-205ENST00000584911 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
LINC00473-205ENST00000584911 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
LINC00473-205ENST00000584911 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
LINC00473-205ENST00000584911 MT1HP80294 61 aa5.46□□□□□ -1.54
LINC00473-205ENST00000584911 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
LINC00473-205ENST00000584911 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
LINC00473-205ENST00000584911 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
LINC00473-205ENST00000584911 M0R2T5 61 aa5.31□□□□□ -1.56
LINC00473-205ENST00000584911 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
LINC00473-205ENST00000584911 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
LINC00473-205ENST00000584911 LCE4AQ5TA78 99 aa5.21□□□□□ -1.57
LINC00473-205ENST00000584911 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
LINC00473-205ENST00000584911 TNP1P09430 55 aa5.18□□□□□ -1.58
LINC00473-205ENST00000584911 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
LINC00473-205ENST00000584911 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.58
LINC00473-205ENST00000584911 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
LINC00473-205ENST00000584911 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
LINC00473-205ENST00000584911 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
LINC00473-205ENST00000584911 MT2AP02795 61 aa5.08□□□□□ -1.6
LINC00473-205ENST00000584911 MT1FP04733 61 aa5.04□□□□□ -1.6
LINC00473-205ENST00000584911 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
LINC00473-205ENST00000584911 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
LINC00473-205ENST00000584911 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
LINC00473-205ENST00000584911 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
LINC00473-205ENST00000584911 USH2AO75445 5202 aa5.01□□□□□ -1.61
LINC00473-205ENST00000584911 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
LINC00473-205ENST00000584911 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
LINC00473-205ENST00000584911 INE1O15225 51 aa4.97□□□□□ -1.61
LINC00473-205ENST00000584911 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
LINC00473-205ENST00000584911 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
LINC00473-205ENST00000584911 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
LINC00473-205ENST00000584911 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
LINC00473-205ENST00000584911 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.64
LINC00473-205ENST00000584911 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
LINC00473-205ENST00000584911 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
LINC00473-205ENST00000584911 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
LINC00473-205ENST00000584911 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
LINC00473-205ENST00000584911 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
LINC00473-205ENST00000584911 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
LINC00473-205ENST00000584911 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms