RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 USP9YO00507 2555 aaPredicted RBP0.5□□□□□ -2.33
NLK-206ENST00000584878 C9orf92A6NGG3 77 aa0.5□□□□□ -2.33
NLK-206ENST00000584878 PRM1P04553 51 aa0.5□□□□□ -2.33
NLK-206ENST00000584878 TNP1P09430 55 aa0.5□□□□□ -2.33
NLK-206ENST00000584878 ANKHD1Q8IWZ3 2542 aaKnown RBP0.5□□□□□ -2.33
NLK-206ENST00000584878 ACANP16112 2415 aa0.5□□□□□ -2.33
NLK-206ENST00000584878 APC2O95996 2303 aa0.5□□□□□ -2.33
NLK-206ENST00000584878 PKD1P98161 4303 aa0.5□□□□□ -2.33
NLK-206ENST00000584878 PKHD1L1Q86WI1 4243 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 NEBP20929 6669 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 C5orf42Q9H799 3197 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 DNAH2Q9P225 4427 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 CSMD1Q96PZ7 3565 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 HERC1Q15751 4861 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 DNAH7Q8WXX0 4024 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 NSD1Q96L73 2696 aaPredicted RBP0.49□□□□□ -2.33
NLK-206ENST00000584878 STAB1Q9NY15 2570 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 DNAH8Q96JB1 4490 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 CEP250Q9BV73 2442 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 FRYQ5TBA9 3013 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 DCHS1Q96JQ0 3298 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 COL12A1Q99715 3063 aa0.49□□□□□ -2.33
NLK-206ENST00000584878 MTORP42345 2549 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 LRRK2Q5S007 2527 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 KALRNO60229 2985 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 ABCA13Q86UQ4 5058 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 U3KQA8 63 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 TACC2O95359 2948 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 ANK3Q12955 4377 aaKnown RBP0.48□□□□□ -2.33
NLK-206ENST00000584878 NBEAL2Q6ZNJ1 2754 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 DYNC2H1Q8NCM8 4307 aaKnown RBP0.48□□□□□ -2.33
NLK-206ENST00000584878 HERC2O95714 4834 aa0.48□□□□□ -2.33
NLK-206ENST00000584878 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
NLK-206ENST00000584878 ACACBO00763 2458 aa0.47□□□□□ -2.33
NLK-206ENST00000584878 PKD1L1Q8TDX9 2849 aa0.47□□□□□ -2.33
NLK-206ENST00000584878 FLNAP21333 2647 aaKnown RBP0.47□□□□□ -2.33
NLK-206ENST00000584878 RPL39P5Q59GN2 51 aa0.47□□□□□ -2.33
NLK-206ENST00000584878 TLN1Q9Y490 2541 aaKnown RBP0.47□□□□□ -2.33
NLK-206ENST00000584878 CFAP54Q96N23 3096 aa0.47□□□□□ -2.33
NLK-206ENST00000584878 SSPOA2VEC9 5147 aa0.47□□□□□ -2.33
NLK-206ENST00000584878 SPENQ96T58 3664 aaKnown RBP0.46□□□□□ -2.34
NLK-206ENST00000584878 BOD1L1Q8NFC6 3051 aa0.46□□□□□ -2.34
NLK-206ENST00000584878 UTP20O75691 2785 aaKnown RBP0.46□□□□□ -2.34
NLK-206ENST00000584878 LAMA5O15230 3695 aa0.46□□□□□ -2.34
NLK-206ENST00000584878 HSPG2P98160 4391 aa0.46□□□□□ -2.34
NLK-206ENST00000584878 H3BNG1 76 aa0.46□□□□□ -2.34
NLK-206ENST00000584878 CFAP46Q8IYW2 2715 aa0.46□□□□□ -2.34
NLK-206ENST00000584878 GOLGB1Q14789 3259 aaKnown RBP0.45□□□□□ -2.34
NLK-206ENST00000584878 SPEGQ15772 3267 aa0.45□□□□□ -2.34
NLK-206ENST00000584878 CUBNO60494 3623 aa0.45□□□□□ -2.34
NLK-206ENST00000584878 HIVEP1P15822 2718 aa0.45□□□□□ -2.34
NLK-206ENST00000584878 DCHS2Q6V1P9 2916 aa0.45□□□□□ -2.34
NLK-206ENST00000584878 AKAP9Q99996 3911 aa0.45□□□□□ -2.34
NLK-206ENST00000584878 DNAH6Q9C0G6 4158 aa0.45□□□□□ -2.34
NLK-206ENST00000584878 TEX15Q9BXT5 2789 aa0.45□□□□□ -2.34
NLK-206ENST00000584878 TLN2Q9Y4G6 2542 aa0.44□□□□□ -2.34
NLK-206ENST00000584878 NBEAL1Q6ZS30 2694 aa0.44□□□□□ -2.34
NLK-206ENST00000584878 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
NLK-206ENST00000584878 CENPFP49454 3210 aa0.44□□□□□ -2.34
NLK-206ENST00000584878 DSTQ03001 7570 aaKnown RBP0.44□□□□□ -2.34
NLK-206ENST00000584878 LRP1Q07954 4544 aaKnown RBP0.44□□□□□ -2.34
NLK-206ENST00000584878 FAT4Q6V0I7 4981 aa0.44□□□□□ -2.34
NLK-206ENST00000584878 DMXL1Q9Y485 3027 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 FLGP20930 4061 aaPredicted RBP0.43□□□□□ -2.34
NLK-206ENST00000584878 DNAH1Q9P2D7 4330 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 SPRR2DP22532 72 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 DEFB110Q30KQ9 67 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 FAT3Q8TDW7 4589 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 HTTP42858 3142 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 LPAP08519 4548 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 SPTAN1Q13813 2472 aaKnown RBP0.43□□□□□ -2.34
NLK-206ENST00000584878 DNAH9Q9NYC9 4486 aa0.43□□□□□ -2.34
NLK-206ENST00000584878 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
NLK-206ENST00000584878 APOBP04114 4563 aaKnown RBP0.42□□□□□ -2.34
NLK-206ENST00000584878 DEFB108AA8MXU0 73 aa0.42□□□□□ -2.34
NLK-206ENST00000584878 KRTAP8-1Q8IUC2 63 aa0.42□□□□□ -2.34
NLK-206ENST00000584878 DNAH14Q0VDD8 3507 aa0.42□□□□□ -2.34
NLK-206ENST00000584878 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
NLK-206ENST00000584878 DMXL2Q8TDJ6 3036 aa0.42□□□□□ -2.34
NLK-206ENST00000584878 CDH23Q9H251 3354 aa0.42□□□□□ -2.34
NLK-206ENST00000584878 SONP18583 2426 aaKnown RBP0.42□□□□□ -2.34
NLK-206ENST00000584878 PRUNE2Q8WUY3 3088 aa0.41□□□□□ -2.34
NLK-206ENST00000584878 FRYLO94915 3013 aa0.41□□□□□ -2.34
NLK-206ENST00000584878 XIRP2A4UGR9 3374 aa0.41□□□□□ -2.34
NLK-206ENST00000584878 H3BUX3 64 aa0.41□□□□□ -2.34
NLK-206ENST00000584878 SPART-AS1P0CW21 52 aa0.41□□□□□ -2.34
NLK-206ENST00000584878 SPRR2BP35325 72 aa0.41□□□□□ -2.34
NLK-206ENST00000584878 COL7A1Q02388 2944 aa0.41□□□□□ -2.34
NLK-206ENST00000584878 CSMD2Q7Z408 3487 aa0.4□□□□□ -2.34
NLK-206ENST00000584878 PLECQ15149 4684 aaKnown RBP0.4□□□□□ -2.35
NLK-206ENST00000584878 PKHD1P08F94 4074 aa0.4□□□□□ -2.35
NLK-206ENST00000584878 TGP01266 2768 aa0.4□□□□□ -2.35
NLK-206ENST00000584878 HRNRQ86YZ3 2850 aaPredicted RBP0.39□□□□□ -2.35
NLK-206ENST00000584878 WDFY3Q8IZQ1 3526 aa0.39□□□□□ -2.35
NLK-206ENST00000584878 ATMQ13315 3056 aa0.39□□□□□ -2.35
NLK-206ENST00000584878 MGAM2Q2M2H8 2515 aa0.39□□□□□ -2.35
NLK-206ENST00000584878 RHPN1-AS1Q9BWJ2 59 aa0.39□□□□□ -2.35
NLK-206ENST00000584878 STAB2Q8WWQ8 2551 aa0.39□□□□□ -2.35
NLK-206ENST00000584878 ITPR1Q14643 2758 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 995.6 ms