RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
ERBB2-220ENST00000584684 H0Y9P7 68 aa5.93□□□□□ -1.46
ERBB2-220ENST00000584684 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
ERBB2-220ENST00000584684 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
ERBB2-220ENST00000584684 A0A087WVE0 104 aa5.91□□□□□ -1.46
ERBB2-220ENST00000584684 MT1BP07438 61 aa5.91□□□□□ -1.46
ERBB2-220ENST00000584684 Q5VV11 94 aa5.9□□□□□ -1.46
ERBB2-220ENST00000584684 A8MUN3 132 aa5.88□□□□□ -1.47
ERBB2-220ENST00000584684 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
ERBB2-220ENST00000584684 H0YAA0 97 aa5.86□□□□□ -1.47
ERBB2-220ENST00000584684 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
ERBB2-220ENST00000584684 NDUFC1O43677 76 aa5.84□□□□□ -1.47
ERBB2-220ENST00000584684 MT-ATP8P03928 68 aa5.84□□□□□ -1.47
ERBB2-220ENST00000584684 IMUPQ9GZP8 106 aa5.84□□□□□ -1.47
ERBB2-220ENST00000584684 LINC00208Q96KT6 92 aa5.83□□□□□ -1.48
ERBB2-220ENST00000584684 A6NN06 94 aa5.82□□□□□ -1.48
ERBB2-220ENST00000584684 MP68P56378 58 aa5.82□□□□□ -1.48
ERBB2-220ENST00000584684 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
ERBB2-220ENST00000584684 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
ERBB2-220ENST00000584684 H3BPC8 53 aa5.77□□□□□ -1.49
ERBB2-220ENST00000584684 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
ERBB2-220ENST00000584684 DMAC1Q96GE9 116 aa5.7□□□□□ -1.5
ERBB2-220ENST00000584684 SCGB1A1P11684 91 aa5.68□□□□□ -1.5
ERBB2-220ENST00000584684 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
ERBB2-220ENST00000584684 NEBP20929 6669 aa5.62□□□□□ -1.51
ERBB2-220ENST00000584684 P0C880 135 aa5.59□□□□□ -1.51
ERBB2-220ENST00000584684 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
ERBB2-220ENST00000584684 SMIM20Q8N5G0 67 aa5.59□□□□□ -1.51
ERBB2-220ENST00000584684 TRAV7A0A075B6U4 112 aa5.58□□□□□ -1.52
ERBB2-220ENST00000584684 R4GN34 69 aa5.58□□□□□ -1.52
ERBB2-220ENST00000584684 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
ERBB2-220ENST00000584684 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
ERBB2-220ENST00000584684 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
ERBB2-220ENST00000584684 MT1XP80297 61 aa5.54□□□□□ -1.52
ERBB2-220ENST00000584684 M0QZ58 72 aa5.53□□□□□ -1.52
ERBB2-220ENST00000584684 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
ERBB2-220ENST00000584684 KMT2DO14686 5537 aa5.52□□□□□ -1.53
ERBB2-220ENST00000584684 ACYP2P14621 99 aa5.52□□□□□ -1.53
ERBB2-220ENST00000584684 ANAPC13Q9BS18 74 aa5.52□□□□□ -1.53
ERBB2-220ENST00000584684 PCP4P48539 62 aa5.51□□□□□ -1.53
ERBB2-220ENST00000584684 SERP2Q8N6R1 65 aa5.49□□□□□ -1.53
ERBB2-220ENST00000584684 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
ERBB2-220ENST00000584684 COX7CP15954 63 aa5.47□□□□□ -1.53
ERBB2-220ENST00000584684 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
ERBB2-220ENST00000584684 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
ERBB2-220ENST00000584684 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
ERBB2-220ENST00000584684 SPANXA2-OT1Q8N9U9 137 aa5.42□□□□□ -1.54
ERBB2-220ENST00000584684 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
ERBB2-220ENST00000584684 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
ERBB2-220ENST00000584684 CHKB-CPT1BH3BT56 60 aa5.4□□□□□ -1.54
ERBB2-220ENST00000584684 SNURFQ9Y675 71 aa5.4□□□□□ -1.54
ERBB2-220ENST00000584684 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
ERBB2-220ENST00000584684 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
ERBB2-220ENST00000584684 CYSTM1Q9H1C7 97 aa5.36□□□□□ -1.55
ERBB2-220ENST00000584684 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
ERBB2-220ENST00000584684 H7BZZ5 65 aa5.28□□□□□ -1.56
ERBB2-220ENST00000584684 SPRR2EP22531 72 aa5.28□□□□□ -1.56
ERBB2-220ENST00000584684 SPRR2BP35325 72 aa5.28□□□□□ -1.56
ERBB2-220ENST00000584684 SPRR2AP35326 72 aa5.28□□□□□ -1.56
ERBB2-220ENST00000584684 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
ERBB2-220ENST00000584684 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
ERBB2-220ENST00000584684 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
ERBB2-220ENST00000584684 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
ERBB2-220ENST00000584684 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
ERBB2-220ENST00000584684 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
ERBB2-220ENST00000584684 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
ERBB2-220ENST00000584684 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
ERBB2-220ENST00000584684 COA5Q86WW8 74 aa5.22□□□□□ -1.57
ERBB2-220ENST00000584684 TMEM258P61165 79 aa5.19□□□□□ -1.58
ERBB2-220ENST00000584684 SEC61GP60059 68 aa5.12□□□□□ -1.59
ERBB2-220ENST00000584684 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
ERBB2-220ENST00000584684 SPRR2DP22532 72 aa5.11□□□□□ -1.59
ERBB2-220ENST00000584684 ATP5EP56381 51 aaPredicted RBP5.11□□□□□ -1.59
ERBB2-220ENST00000584684 SERP1Q9Y6X1 66 aa5.1□□□□□ -1.59
ERBB2-220ENST00000584684 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
ERBB2-220ENST00000584684 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
ERBB2-220ENST00000584684 A0A1B0GU33 70 aa5.03□□□□□ -1.6
ERBB2-220ENST00000584684 A0A0D9SG42 100 aa5.02□□□□□ -1.61
ERBB2-220ENST00000584684 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
ERBB2-220ENST00000584684 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
ERBB2-220ENST00000584684 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
ERBB2-220ENST00000584684 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
ERBB2-220ENST00000584684 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
ERBB2-220ENST00000584684 A0A1B0GU69 56 aa4.95□□□□□ -1.62
ERBB2-220ENST00000584684 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
ERBB2-220ENST00000584684 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
ERBB2-220ENST00000584684 MT1EP04732 61 aa4.91□□□□□ -1.62
ERBB2-220ENST00000584684 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
ERBB2-220ENST00000584684 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
ERBB2-220ENST00000584684 A8MU10 97 aa4.83□□□□□ -1.64
ERBB2-220ENST00000584684 Q1T7F1 81 aa4.83□□□□□ -1.64
ERBB2-220ENST00000584684 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
ERBB2-220ENST00000584684 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
ERBB2-220ENST00000584684 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
ERBB2-220ENST00000584684 V9GYY9 64 aa4.79□□□□□ -1.64
ERBB2-220ENST00000584684 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
ERBB2-220ENST00000584684 MT1GP13640 62 aa4.76□□□□□ -1.65
ERBB2-220ENST00000584684 PSPHP1O15172 72 aa4.75□□□□□ -1.65
ERBB2-220ENST00000584684 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
ERBB2-220ENST00000584684 TNP1P09430 55 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 1272.9 ms