RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
CCDC47-206ENST00000584112 PRO0461Q9UI25 63 aa5.17□□□□□ -1.58
CCDC47-206ENST00000584112 K7EP34 96 aa5.16□□□□□ -1.58
CCDC47-206ENST00000584112 SPRR2DP22532 72 aa5.14□□□□□ -1.59
CCDC47-206ENST00000584112 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
CCDC47-206ENST00000584112 TP53AIP1Q9HCN2 124 aa5.13□□□□□ -1.59
CCDC47-206ENST00000584112 C5orf47Q569G3 176 aa5.12□□□□□ -1.59
CCDC47-206ENST00000584112 S4R3F8 94 aa5.12□□□□□ -1.59
CCDC47-206ENST00000584112 FAM236AA0A1B0GUQ0 79 aa5.11□□□□□ -1.59
CCDC47-206ENST00000584112 FAM236BA0A1B0GV22 79 aa5.11□□□□□ -1.59
CCDC47-206ENST00000584112 GTF2H5Q6ZYL4 71 aa5.11□□□□□ -1.59
CCDC47-206ENST00000584112 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
CCDC47-206ENST00000584112 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
CCDC47-206ENST00000584112 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
CCDC47-206ENST00000584112 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
CCDC47-206ENST00000584112 F8W1H4 67 aa5.08□□□□□ -1.6
CCDC47-206ENST00000584112 LCA10Q71F78 164 aa5.06□□□□□ -1.6
CCDC47-206ENST00000584112 ETDBQ3ZM63 59 aa5.05□□□□□ -1.6
CCDC47-206ENST00000584112 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
CCDC47-206ENST00000584112 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
CCDC47-206ENST00000584112 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
CCDC47-206ENST00000584112 Q5VV11 94 aa5.01□□□□□ -1.61
CCDC47-206ENST00000584112 TRAV22A0A0B4J277 110 aa5□□□□□ -1.61
CCDC47-206ENST00000584112 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
CCDC47-206ENST00000584112 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
CCDC47-206ENST00000584112 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
CCDC47-206ENST00000584112 CYP4F30PQ9H0H9 118 aa5□□□□□ -1.61
CCDC47-206ENST00000584112 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
CCDC47-206ENST00000584112 ACYP1P07311 99 aa4.99□□□□□ -1.61
CCDC47-206ENST00000584112 KLKP1Q107X0 134 aa4.98□□□□□ -1.61
CCDC47-206ENST00000584112 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
CCDC47-206ENST00000584112 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
CCDC47-206ENST00000584112 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
CCDC47-206ENST00000584112 PCP4L1A6NKN8 68 aa4.97□□□□□ -1.61
CCDC47-206ENST00000584112 MT1BP07438 61 aa4.97□□□□□ -1.61
CCDC47-206ENST00000584112 ATP5EP2Q5VTU8 51 aa4.96□□□□□ -1.62
CCDC47-206ENST00000584112 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
CCDC47-206ENST00000584112 FAM240AA0A1B0GVK7 77 aa4.94□□□□□ -1.62
CCDC47-206ENST00000584112 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
CCDC47-206ENST00000584112 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
CCDC47-206ENST00000584112 ATOX1O00244 68 aa4.93□□□□□ -1.62
CCDC47-206ENST00000584112 CRIPTQ9P021 101 aa4.93□□□□□ -1.62
CCDC47-206ENST00000584112 UQCRQO14949 82 aa4.92□□□□□ -1.62
CCDC47-206ENST00000584112 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
CCDC47-206ENST00000584112 H0Y9P7 68 aa4.91□□□□□ -1.62
CCDC47-206ENST00000584112 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
CCDC47-206ENST00000584112 A0A087WVE0 104 aa4.9□□□□□ -1.63
CCDC47-206ENST00000584112 NDUFC1O43677 76 aa4.89□□□□□ -1.63
CCDC47-206ENST00000584112 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
CCDC47-206ENST00000584112 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
CCDC47-206ENST00000584112 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
CCDC47-206ENST00000584112 A8MUN3 132 aa4.86□□□□□ -1.63
CCDC47-206ENST00000584112 H0YAA0 97 aa4.86□□□□□ -1.63
CCDC47-206ENST00000584112 LINC00643Q86TS7 51 aa4.84□□□□□ -1.63
CCDC47-206ENST00000584112 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
CCDC47-206ENST00000584112 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
CCDC47-206ENST00000584112 MP68P56378 58 aa4.8□□□□□ -1.64
CCDC47-206ENST00000584112 ADM2Q7Z4H4 148 aa4.79□□□□□ -1.64
CCDC47-206ENST00000584112 OCR1Q9BZK8 76 aa4.77□□□□□ -1.65
CCDC47-206ENST00000584112 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
CCDC47-206ENST00000584112 H3BPC8 53 aa4.73□□□□□ -1.65
CCDC47-206ENST00000584112 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
CCDC47-206ENST00000584112 C20orf197Q8N268 126 aa4.72□□□□□ -1.65
CCDC47-206ENST00000584112 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
CCDC47-206ENST00000584112 R4GN34 69 aa4.7□□□□□ -1.66
CCDC47-206ENST00000584112 J3QR89 54 aa4.69□□□□□ -1.66
CCDC47-206ENST00000584112 A0A1B0GV90 55 aa4.68□□□□□ -1.66
CCDC47-206ENST00000584112 DMAC1Q96GE9 116 aa4.68□□□□□ -1.66
CCDC47-206ENST00000584112 SCGB1A1P11684 91 aa4.67□□□□□ -1.66
CCDC47-206ENST00000584112 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
CCDC47-206ENST00000584112 P0C880 135 aa4.65□□□□□ -1.67
CCDC47-206ENST00000584112 MT1XP80297 61 aa4.65□□□□□ -1.67
CCDC47-206ENST00000584112 M0QZ58 72 aa4.64□□□□□ -1.67
CCDC47-206ENST00000584112 MT4P47944 62 aa4.62□□□□□ -1.67
CCDC47-206ENST00000584112 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
CCDC47-206ENST00000584112 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
CCDC47-206ENST00000584112 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
CCDC47-206ENST00000584112 ACYP2P14621 99 aa4.57□□□□□ -1.68
CCDC47-206ENST00000584112 LINC01554Q52M75 96 aa4.57□□□□□ -1.68
CCDC47-206ENST00000584112 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
CCDC47-206ENST00000584112 SPTSSBQ8NFR3 76 aa4.55□□□□□ -1.68
CCDC47-206ENST00000584112 SMIM20Q8N5G0 67 aa4.54□□□□□ -1.68
CCDC47-206ENST00000584112 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
CCDC47-206ENST00000584112 MT-ATP8P03928 68 aa4.5□□□□□ -1.69
CCDC47-206ENST00000584112 CHKB-CPT1BH3BT56 60 aa4.49□□□□□ -1.69
CCDC47-206ENST00000584112 K7ERU9 68 aa4.47□□□□□ -1.69
CCDC47-206ENST00000584112 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
CCDC47-206ENST00000584112 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
CCDC47-206ENST00000584112 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
CCDC47-206ENST00000584112 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
CCDC47-206ENST00000584112 SPANXA2-OT1Q8N9U9 137 aa4.4□□□□□ -1.71
CCDC47-206ENST00000584112 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
CCDC47-206ENST00000584112 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
CCDC47-206ENST00000584112 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
CCDC47-206ENST00000584112 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
CCDC47-206ENST00000584112 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
CCDC47-206ENST00000584112 COA5Q86WW8 74 aa4.27□□□□□ -1.73
CCDC47-206ENST00000584112 SEC61GP60059 68 aa4.26□□□□□ -1.73
CCDC47-206ENST00000584112 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
CCDC47-206ENST00000584112 A0A0D9SG42 100 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms