RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877		A0A087WVE0	104 aa		4.25	□□□□□ -1.73
NUP85-223	ENST00000583877	IGKV4-1	P06312	121 aa		4.25	□□□□□ -1.73
NUP85-223	ENST00000583877	KLKP1	Q107X0	134 aa		4.25	□□□□□ -1.73
NUP85-223	ENST00000583877		Q6ZVQ6	151 aa		4.25	□□□□□ -1.73
NUP85-223	ENST00000583877	C5orf47	Q569G3	176 aa		4.24	□□□□□ -1.73
NUP85-223	ENST00000583877	SERP1	Q9Y6X1	66 aa		4.22	□□□□□ -1.73
NUP85-223	ENST00000583877	MUC12	Q9UKN1	5478 aa		4.21	□□□□□ -1.74
NUP85-223	ENST00000583877	IGHV6-1	A0A0B4J1U7	121 aa		4.2	□□□□□ -1.74
NUP85-223	ENST00000583877		A8MWP4	228 aa		4.2	□□□□□ -1.74
NUP85-223	ENST00000583877	DEFB116	Q30KQ4	102 aa		4.2	□□□□□ -1.74
NUP85-223	ENST00000583877	C20orf197	Q8N268	126 aa		4.2	□□□□□ -1.74
NUP85-223	ENST00000583877		A0A1W2PNM2	257 aa		4.19	□□□□□ -1.74
NUP85-223	ENST00000583877		H7BZZ5	65 aa		4.19	□□□□□ -1.74
NUP85-223	ENST00000583877	NREP	Q16612	68 aa		4.18	□□□□□ -1.74
NUP85-223	ENST00000583877	CYSTM1	Q9H1C7	97 aa		4.17	□□□□□ -1.74
NUP85-223	ENST00000583877	SMIM26	A0A096LP01	95 aa		4.16	□□□□□ -1.74
NUP85-223	ENST00000583877	BPY2	O14599	106 aa		4.16	□□□□□ -1.74
NUP85-223	ENST00000583877	SPINK7	P58062	85 aa		4.16	□□□□□ -1.74
NUP85-223	ENST00000583877	LCE1A	Q5T7P2	110 aa		4.15	□□□□□ -1.75
NUP85-223	ENST00000583877	C8orf87	E5RJ46	101 aa		4.14	□□□□□ -1.75
NUP85-223	ENST00000583877	TMEM254	Q8TBM7	123 aa		4.14	□□□□□ -1.75
NUP85-223	ENST00000583877	ZCCHC13	Q8WW36	166 aa	Known RBP	4.14	□□□□□ -1.75
NUP85-223	ENST00000583877	LINC00472	Q9H8W2	130 aa		4.13	□□□□□ -1.75
NUP85-223	ENST00000583877		A0A1B0GVX0	72 aa		4.12	□□□□□ -1.75
NUP85-223	ENST00000583877	WFDC13	Q8IUB5	93 aa		4.12	□□□□□ -1.75
NUP85-223	ENST00000583877	OCR1	Q9BZK8	76 aa		4.12	□□□□□ -1.75
NUP85-223	ENST00000583877	KRTAP20-1	Q3LI63	56 aa		4.11	□□□□□ -1.75
NUP85-223	ENST00000583877	NDUFB1	O75438	58 aa		4.09	□□□□□ -1.75
NUP85-223	ENST00000583877		H3BPC8	53 aa		4.08	□□□□□ -1.76
NUP85-223	ENST00000583877	PRO0628	Q9UI54	55 aa		4.08	□□□□□ -1.76
NUP85-223	ENST00000583877	SNURF	Q9Y675	71 aa		4.08	□□□□□ -1.76
NUP85-223	ENST00000583877	C4orf26	Q17RF5	130 aa		4.06	□□□□□ -1.76
NUP85-223	ENST00000583877	HCG22	E2RYF7	251 aa		4.05	□□□□□ -1.76
NUP85-223	ENST00000583877	CYP4F30P	Q9H0H9	118 aa		4.05	□□□□□ -1.76
NUP85-223	ENST00000583877	MDN1	Q9NU22	5596 aa		4.05	□□□□□ -1.76
NUP85-223	ENST00000583877		A6NN06	94 aa		4.04	□□□□□ -1.76
NUP85-223	ENST00000583877	MP68	P56378	58 aa		4.03	□□□□□ -1.76
NUP85-223	ENST00000583877	H1FX-AS1	Q4G0G2	97 aa		4.03	□□□□□ -1.76
NUP85-223	ENST00000583877		V9GYY9	64 aa		4.03	□□□□□ -1.76
NUP85-223	ENST00000583877	hDV103S1	A0JD37	113 aa		4.02	□□□□□ -1.77
NUP85-223	ENST00000583877		Q8N9L7	120 aa		4.02	□□□□□ -1.77
NUP85-223	ENST00000583877	C8orf17	Q9NRJ1	99 aa		4.02	□□□□□ -1.77
NUP85-223	ENST00000583877	KMT2D	O14686	5537 aa		4.02	□□□□□ -1.77
NUP85-223	ENST00000583877	KRTAP5-9	P26371	169 aa		4.01	□□□□□ -1.77
NUP85-223	ENST00000583877	SPANXA2-OT1	Q8N9U9	137 aa		4.01	□□□□□ -1.77
NUP85-223	ENST00000583877		K7EQZ3	153 aa		4	□□□□□ -1.77
NUP85-223	ENST00000583877		Q1T7F1	81 aa		4	□□□□□ -1.77
NUP85-223	ENST00000583877	NDUFS5	O43920	106 aa		3.97	□□□□□ -1.77
NUP85-223	ENST00000583877	MT1B	P07438	61 aa		3.97	□□□□□ -1.77
NUP85-223	ENST00000583877	PRR15	Q8IV56	129 aa		3.97	□□□□□ -1.77
NUP85-223	ENST00000583877	TRAV22	A0A0B4J277	110 aa		3.96	□□□□□ -1.78
NUP85-223	ENST00000583877		Q5VV11	94 aa		3.96	□□□□□ -1.78
NUP85-223	ENST00000583877	CASC2	Q6XLA1	102 aa		3.96	□□□□□ -1.78
NUP85-223	ENST00000583877	TP53AIP1	Q9HCN2	124 aa		3.96	□□□□□ -1.78
NUP85-223	ENST00000583877	NDUFAF8	A1L188	74 aa		3.95	□□□□□ -1.78
NUP85-223	ENST00000583877	KRTAP10-5	P60370	271 aa		3.95	□□□□□ -1.78
NUP85-223	ENST00000583877	C1orf64	Q8NEQ6	169 aa		3.95	□□□□□ -1.78
NUP85-223	ENST00000583877	KRTAP2-3	P0C7H8	128 aa		3.94	□□□□□ -1.78
NUP85-223	ENST00000583877	MRPL34	Q9BQ48	92 aa	Known RBP	3.94	□□□□□ -1.78
NUP85-223	ENST00000583877	KRTAP2-4	Q9BYR9	128 aa		3.94	□□□□□ -1.78
NUP85-223	ENST00000583877		H0Y9P7	68 aa		3.93	□□□□□ -1.78
NUP85-223	ENST00000583877	KRTAP19-8	Q3LI54	63 aa		3.93	□□□□□ -1.78
NUP85-223	ENST00000583877	BRK1	Q8WUW1	75 aa		3.93	□□□□□ -1.78
NUP85-223	ENST00000583877	LINC00208	Q96KT6	92 aa		3.92	□□□□□ -1.78
NUP85-223	ENST00000583877	SPRR2G	Q9BYE4	73 aa		3.92	□□□□□ -1.78
NUP85-223	ENST00000583877	MT3	P25713	68 aa		3.91	□□□□□ -1.78
NUP85-223	ENST00000583877	C7orf65	Q6ZTY9	151 aa		3.91	□□□□□ -1.78
NUP85-223	ENST00000583877	MMP24-AS1	A0A0U1RRL7	71 aa		3.9	□□□□□ -1.79
NUP85-223	ENST00000583877	LOC101927531	A0A1B0GV80	90 aa		3.85	□□□□□ -1.79
NUP85-223	ENST00000583877		Q5W150	140 aa		3.85	□□□□□ -1.79
NUP85-223	ENST00000583877	CSAG1	Q6PB30	78 aa		3.85	□□□□□ -1.79
NUP85-223	ENST00000583877		S4R3F8	94 aa		3.85	□□□□□ -1.79
NUP85-223	ENST00000583877	COA5	Q86WW8	74 aa		3.82	□□□□□ -1.8
NUP85-223	ENST00000583877		A8MUN3	132 aa		3.81	□□□□□ -1.8
NUP85-223	ENST00000583877	SPRR2E	P22531	72 aa		3.81	□□□□□ -1.8
NUP85-223	ENST00000583877	SPRR2B	P35325	72 aa		3.81	□□□□□ -1.8
NUP85-223	ENST00000583877	SPRR2A	P35326	72 aa		3.81	□□□□□ -1.8
NUP85-223	ENST00000583877	SPRR2F	Q96RM1	72 aa		3.81	□□□□□ -1.8
NUP85-223	ENST00000583877	LINC01558	Q9Y6Z2	57 aa		3.81	□□□□□ -1.8
NUP85-223	ENST00000583877	PSPHP1	O15172	72 aa		3.8	□□□□□ -1.8
NUP85-223	ENST00000583877	PMAIP1	Q13794	54 aa		3.8	□□□□□ -1.8
NUP85-223	ENST00000583877	CHKB-CPT1B	H3BT56	60 aa		3.79	□□□□□ -1.8
NUP85-223	ENST00000583877	LCA10	Q71F78	164 aa		3.79	□□□□□ -1.8
NUP85-223	ENST00000583877	KRTAP2-2	Q9BYT5	123 aa		3.79	□□□□□ -1.8
NUP85-223	ENST00000583877	KRTAP2-1	Q9BYU5	128 aa		3.79	□□□□□ -1.8
NUP85-223	ENST00000583877	PRR15L	Q9BU68	103 aa		3.78	□□□□□ -1.8
NUP85-223	ENST00000583877	CDC42SE1	Q9NRR8	79 aa		3.77	□□□□□ -1.81
NUP85-223	ENST00000583877	ACYP2	P14621	99 aa		3.76	□□□□□ -1.81
NUP85-223	ENST00000583877	CRIPT	Q9P021	101 aa		3.76	□□□□□ -1.81
NUP85-223	ENST00000583877		A6NED7	52 aa		3.75	□□□□□ -1.81
NUP85-223	ENST00000583877	KTN1-AS1	Q86SY8	53 aa		3.73	□□□□□ -1.81
NUP85-223	ENST00000583877	SEC61G	P60059	68 aa		3.72	□□□□□ -1.81
NUP85-223	ENST00000583877	DMAC1	Q96GE9	116 aa		3.72	□□□□□ -1.81
NUP85-223	ENST00000583877	KRTAP8-1	Q8IUC2	63 aa		3.71	□□□□□ -1.82
NUP85-223	ENST00000583877	PRO2289	Q9P1D8	64 aa		3.7	□□□□□ -1.82
NUP85-223	ENST00000583877	SPRR2D	P22532	72 aa		3.69	□□□□□ -1.82
NUP85-223	ENST00000583877	MT1X	P80297	61 aa		3.66	□□□□□ -1.82
NUP85-223	ENST00000583877	SPTSSB	Q8NFR3	76 aa		3.66	□□□□□ -1.82
NUP85-223	ENST00000583877	KRTAP5-3	Q6L8H2	238 aa		3.65	□□□□□ -1.83
NUP85-223	ENST00000583877		A0A1B0GU69	56 aa		3.64	□□□□□ -1.83

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