RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
SRSF1-205ENST00000582730 TNXBP22105 4242 aa7.24□□□□□ -1.25
SRSF1-205ENST00000582730 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
SRSF1-205ENST00000582730 MYCBP2O75592 4640 aa7.19□□□□□ -1.26
SRSF1-205ENST00000582730 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
SRSF1-205ENST00000582730 XP32Q5T750 250 aa7.17□□□□□ -1.26
SRSF1-205ENST00000582730 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
SRSF1-205ENST00000582730 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
SRSF1-205ENST00000582730 A0A1B0GU33 70 aa7.16□□□□□ -1.26
SRSF1-205ENST00000582730 MT1HL1P0DM35 61 aa7.15□□□□□ -1.27
SRSF1-205ENST00000582730 H1FX-AS1Q4G0G2 97 aa7.11□□□□□ -1.27
SRSF1-205ENST00000582730 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
SRSF1-205ENST00000582730 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
SRSF1-205ENST00000582730 ROMO1P60602 79 aa7.07□□□□□ -1.28
SRSF1-205ENST00000582730 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
SRSF1-205ENST00000582730 K7ERS5 55 aa6.98□□□□□ -1.29
SRSF1-205ENST00000582730 S4R3F8 94 aa6.96□□□□□ -1.3
SRSF1-205ENST00000582730 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
SRSF1-205ENST00000582730 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
SRSF1-205ENST00000582730 LRP2P98164 4655 aa6.92□□□□□ -1.3
SRSF1-205ENST00000582730 P0C880 135 aa6.89□□□□□ -1.31
SRSF1-205ENST00000582730 LPAP08519 4548 aa6.89□□□□□ -1.31
SRSF1-205ENST00000582730 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
SRSF1-205ENST00000582730 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
SRSF1-205ENST00000582730 J3QL48 77 aa6.87□□□□□ -1.31
SRSF1-205ENST00000582730 KRTAP10-6P60371 365 aaPredicted RBP6.82□□□□□ -1.32
SRSF1-205ENST00000582730 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
SRSF1-205ENST00000582730 A0A0D9SG42 100 aa6.82□□□□□ -1.32
SRSF1-205ENST00000582730 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
SRSF1-205ENST00000582730 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
SRSF1-205ENST00000582730 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
SRSF1-205ENST00000582730 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
SRSF1-205ENST00000582730 HERC2O95714 4834 aa6.71□□□□□ -1.33
SRSF1-205ENST00000582730 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
SRSF1-205ENST00000582730 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
SRSF1-205ENST00000582730 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
SRSF1-205ENST00000582730 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
SRSF1-205ENST00000582730 BIRC6Q9NR09 4857 aa6.57□□□□□ -1.36
SRSF1-205ENST00000582730 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
SRSF1-205ENST00000582730 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
SRSF1-205ENST00000582730 M0QZ58 72 aa6.5□□□□□ -1.37
SRSF1-205ENST00000582730 R4GN34 69 aa6.48□□□□□ -1.37
SRSF1-205ENST00000582730 MUC2Q02817 5179 aa6.45□□□□□ -1.38
SRSF1-205ENST00000582730 HERC1Q15751 4861 aa6.41□□□□□ -1.38
SRSF1-205ENST00000582730 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.39
SRSF1-205ENST00000582730 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.39
SRSF1-205ENST00000582730 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
SRSF1-205ENST00000582730 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
SRSF1-205ENST00000582730 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
SRSF1-205ENST00000582730 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
SRSF1-205ENST00000582730 PLAC4Q8WY50 150 aa6.19□□□□□ -1.42
SRSF1-205ENST00000582730 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
SRSF1-205ENST00000582730 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
SRSF1-205ENST00000582730 M0R2T5 61 aa6.15□□□□□ -1.43
SRSF1-205ENST00000582730 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
SRSF1-205ENST00000582730 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
SRSF1-205ENST00000582730 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.44
SRSF1-205ENST00000582730 MT1HP80294 61 aa6.01□□□□□ -1.45
SRSF1-205ENST00000582730 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
SRSF1-205ENST00000582730 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
SRSF1-205ENST00000582730 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
SRSF1-205ENST00000582730 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
SRSF1-205ENST00000582730 MT1FP04733 61 aa5.87□□□□□ -1.47
SRSF1-205ENST00000582730 MT2AP02795 61 aa5.87□□□□□ -1.47
SRSF1-205ENST00000582730 TNP1P09430 55 aa5.85□□□□□ -1.47
SRSF1-205ENST00000582730 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
SRSF1-205ENST00000582730 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
SRSF1-205ENST00000582730 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
SRSF1-205ENST00000582730 KRTAP19-8Q3LI54 63 aa5.63□□□□□ -1.51
SRSF1-205ENST00000582730 MT1BP07438 61 aa5.61□□□□□ -1.51
SRSF1-205ENST00000582730 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
SRSF1-205ENST00000582730 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
SRSF1-205ENST00000582730 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
SRSF1-205ENST00000582730 MT1XP80297 61 aa5.52□□□□□ -1.53
SRSF1-205ENST00000582730 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
SRSF1-205ENST00000582730 LCE2BO14633 110 aa5.41□□□□□ -1.54
SRSF1-205ENST00000582730 PRO2289Q9P1D8 64 aa5.41□□□□□ -1.54
SRSF1-205ENST00000582730 LCE2AQ5TA79 106 aaPredicted RBP5.4□□□□□ -1.55
SRSF1-205ENST00000582730 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
SRSF1-205ENST00000582730 USH2AO75445 5202 aa5.36□□□□□ -1.55
SRSF1-205ENST00000582730 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
SRSF1-205ENST00000582730 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
SRSF1-205ENST00000582730 INE1O15225 51 aa5.23□□□□□ -1.57
SRSF1-205ENST00000582730 KMT2DO14686 5537 aa5.17□□□□□ -1.58
SRSF1-205ENST00000582730 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
SRSF1-205ENST00000582730 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
SRSF1-205ENST00000582730 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
SRSF1-205ENST00000582730 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
SRSF1-205ENST00000582730 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
SRSF1-205ENST00000582730 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
SRSF1-205ENST00000582730 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
SRSF1-205ENST00000582730 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
SRSF1-205ENST00000582730 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
SRSF1-205ENST00000582730 MT1EP04732 61 aa4.8□□□□□ -1.64
SRSF1-205ENST00000582730 MT1LQ93083 61 aa4.77□□□□□ -1.65
SRSF1-205ENST00000582730 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
SRSF1-205ENST00000582730 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
SRSF1-205ENST00000582730 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
SRSF1-205ENST00000582730 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
SRSF1-205ENST00000582730 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms