RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
GGA3-214ENST00000582717 FAT3Q8TDW7 4589 aa7.28□□□□□ -1.24
GGA3-214ENST00000582717 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
GGA3-214ENST00000582717 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
GGA3-214ENST00000582717 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
GGA3-214ENST00000582717 K7ERS5 55 aa7.21□□□□□ -1.26
GGA3-214ENST00000582717 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
GGA3-214ENST00000582717 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
GGA3-214ENST00000582717 DMBT1Q9UGM3 2413 aaPredicted RBP7.17□□□□□ -1.26
GGA3-214ENST00000582717 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
GGA3-214ENST00000582717 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
GGA3-214ENST00000582717 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
GGA3-214ENST00000582717 ROMO1P60602 79 aa7.09□□□□□ -1.27
GGA3-214ENST00000582717 XP32Q5T750 250 aa7.07□□□□□ -1.28
GGA3-214ENST00000582717 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
GGA3-214ENST00000582717 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
GGA3-214ENST00000582717 J3QL48 77 aa6.98□□□□□ -1.29
GGA3-214ENST00000582717 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
GGA3-214ENST00000582717 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
GGA3-214ENST00000582717 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
GGA3-214ENST00000582717 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
GGA3-214ENST00000582717 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
GGA3-214ENST00000582717 TPRXLQ17RH7 258 aa6.9□□□□□ -1.3
GGA3-214ENST00000582717 S4R3F8 94 aa6.9□□□□□ -1.31
GGA3-214ENST00000582717 A0A0D9SG42 100 aa6.88□□□□□ -1.31
GGA3-214ENST00000582717 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
GGA3-214ENST00000582717 LRP2P98164 4655 aa6.86□□□□□ -1.31
GGA3-214ENST00000582717 LPAP08519 4548 aa6.85□□□□□ -1.31
GGA3-214ENST00000582717 P0C880 135 aa6.83□□□□□ -1.32
GGA3-214ENST00000582717 HERC2O95714 4834 aa6.78□□□□□ -1.32
GGA3-214ENST00000582717 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
GGA3-214ENST00000582717 BIRC6Q9NR09 4857 aa6.77□□□□□ -1.33
GGA3-214ENST00000582717 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
GGA3-214ENST00000582717 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
GGA3-214ENST00000582717 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
GGA3-214ENST00000582717 M0QZ58 72 aa6.66□□□□□ -1.34
GGA3-214ENST00000582717 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
GGA3-214ENST00000582717 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
GGA3-214ENST00000582717 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
GGA3-214ENST00000582717 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
GGA3-214ENST00000582717 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
GGA3-214ENST00000582717 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
GGA3-214ENST00000582717 HERC1Q15751 4861 aa6.45□□□□□ -1.38
GGA3-214ENST00000582717 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
GGA3-214ENST00000582717 HMCN2Q8NDA2 5059 aa6.4□□□□□ -1.38
GGA3-214ENST00000582717 R4GN34 69 aa6.4□□□□□ -1.38
GGA3-214ENST00000582717 MUC2Q02817 5179 aa6.34□□□□□ -1.39
GGA3-214ENST00000582717 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
GGA3-214ENST00000582717 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
GGA3-214ENST00000582717 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
GGA3-214ENST00000582717 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
GGA3-214ENST00000582717 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
GGA3-214ENST00000582717 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
GGA3-214ENST00000582717 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
GGA3-214ENST00000582717 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
GGA3-214ENST00000582717 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
GGA3-214ENST00000582717 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
GGA3-214ENST00000582717 MT1HP80294 61 aa6.01□□□□□ -1.45
GGA3-214ENST00000582717 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
GGA3-214ENST00000582717 M0R2T5 61 aa5.96□□□□□ -1.45
GGA3-214ENST00000582717 TNP1P09430 55 aa5.94□□□□□ -1.46
GGA3-214ENST00000582717 MT2AP02795 61 aa5.86□□□□□ -1.47
GGA3-214ENST00000582717 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
GGA3-214ENST00000582717 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
GGA3-214ENST00000582717 MT1FP04733 61 aa5.85□□□□□ -1.47
GGA3-214ENST00000582717 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
GGA3-214ENST00000582717 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
GGA3-214ENST00000582717 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
GGA3-214ENST00000582717 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.51
GGA3-214ENST00000582717 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
GGA3-214ENST00000582717 MT1BP07438 61 aa5.6□□□□□ -1.51
GGA3-214ENST00000582717 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
GGA3-214ENST00000582717 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
GGA3-214ENST00000582717 MT1XP80297 61 aa5.49□□□□□ -1.53
GGA3-214ENST00000582717 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
GGA3-214ENST00000582717 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
GGA3-214ENST00000582717 LCE2BO14633 110 aa5.43□□□□□ -1.54
GGA3-214ENST00000582717 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
GGA3-214ENST00000582717 INE1O15225 51 aa5.36□□□□□ -1.55
GGA3-214ENST00000582717 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
GGA3-214ENST00000582717 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
GGA3-214ENST00000582717 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
GGA3-214ENST00000582717 USH2AO75445 5202 aa5.24□□□□□ -1.57
GGA3-214ENST00000582717 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
GGA3-214ENST00000582717 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
GGA3-214ENST00000582717 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
GGA3-214ENST00000582717 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
GGA3-214ENST00000582717 KMT2DO14686 5537 aa5.02□□□□□ -1.61
GGA3-214ENST00000582717 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
GGA3-214ENST00000582717 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
GGA3-214ENST00000582717 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
GGA3-214ENST00000582717 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
GGA3-214ENST00000582717 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
GGA3-214ENST00000582717 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
GGA3-214ENST00000582717 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
GGA3-214ENST00000582717 MT1EP04732 61 aa4.77□□□□□ -1.65
GGA3-214ENST00000582717 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
GGA3-214ENST00000582717 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
GGA3-214ENST00000582717 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
GGA3-214ENST00000582717 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms