RNA–Protein interactions for RNA: ENST00000582681.1

NUP85-218, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-218ENST00000582681 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
NUP85-218ENST00000582681 NOTCH2NLQ7Z3S9 236 aa4.19□□□□□ -1.74
NUP85-218ENST00000582681 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
NUP85-218ENST00000582681 MMP24-AS1A0A0U1RRL7 71 aa4.18□□□□□ -1.74
NUP85-218ENST00000582681 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
NUP85-218ENST00000582681 H3BS24 57 aa4.18□□□□□ -1.74
NUP85-218ENST00000582681 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
NUP85-218ENST00000582681 HRES1P13985 223 aa4.16□□□□□ -1.74
NUP85-218ENST00000582681 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
NUP85-218ENST00000582681 A0A1B0GU69 56 aa4.15□□□□□ -1.75
NUP85-218ENST00000582681 A8MUU9 505 aa4.15□□□□□ -1.75
NUP85-218ENST00000582681 KRTAP16-1A8MUX0 517 aa4.15□□□□□ -1.75
NUP85-218ENST00000582681 SPINK7P58062 85 aa4.15□□□□□ -1.75
NUP85-218ENST00000582681 A8MU10 97 aa4.14□□□□□ -1.75
NUP85-218ENST00000582681 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
NUP85-218ENST00000582681 PCOTHQ58A44 107 aa4.14□□□□□ -1.75
NUP85-218ENST00000582681 C8orf17Q9NRJ1 99 aa4.14□□□□□ -1.75
NUP85-218ENST00000582681 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
NUP85-218ENST00000582681 MRPL34Q9BQ48 92 aaKnown RBP4.13□□□□□ -1.75
NUP85-218ENST00000582681 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
NUP85-218ENST00000582681 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
NUP85-218ENST00000582681 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
NUP85-218ENST00000582681 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
NUP85-218ENST00000582681 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
NUP85-218ENST00000582681 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
NUP85-218ENST00000582681 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
NUP85-218ENST00000582681 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
NUP85-218ENST00000582681 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
NUP85-218ENST00000582681 LCE2BO14633 110 aa4.05□□□□□ -1.76
NUP85-218ENST00000582681 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
NUP85-218ENST00000582681 K7ERS5 55 aa4.01□□□□□ -1.77
NUP85-218ENST00000582681 MT1HP80294 61 aa4.01□□□□□ -1.77
NUP85-218ENST00000582681 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
NUP85-218ENST00000582681 ROMO1P60602 79 aa4□□□□□ -1.77
NUP85-218ENST00000582681 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
NUP85-218ENST00000582681 CSAG1Q6PB30 78 aa3.99□□□□□ -1.77
NUP85-218ENST00000582681 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
NUP85-218ENST00000582681 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
NUP85-218ENST00000582681 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.77
NUP85-218ENST00000582681 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
NUP85-218ENST00000582681 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
NUP85-218ENST00000582681 M0R2T5 61 aa3.93□□□□□ -1.78
NUP85-218ENST00000582681 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
NUP85-218ENST00000582681 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
NUP85-218ENST00000582681 Q5W150 140 aa3.92□□□□□ -1.78
NUP85-218ENST00000582681 ADM2Q7Z4H4 148 aa3.91□□□□□ -1.78
NUP85-218ENST00000582681 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
NUP85-218ENST00000582681 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
NUP85-218ENST00000582681 A0A1B0GU33 70 aa3.83□□□□□ -1.8
NUP85-218ENST00000582681 H1FX-AS1Q4G0G2 97 aa3.79□□□□□ -1.8
NUP85-218ENST00000582681 H0YAA0 97 aa3.77□□□□□ -1.81
NUP85-218ENST00000582681 MT2AP02795 61 aa3.77□□□□□ -1.81
NUP85-218ENST00000582681 KRTAP3-1Q9BYR8 98 aa3.76□□□□□ -1.81
NUP85-218ENST00000582681 MT1FP04733 61 aa3.74□□□□□ -1.81
NUP85-218ENST00000582681 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
NUP85-218ENST00000582681 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
NUP85-218ENST00000582681 P0C880 135 aa3.69□□□□□ -1.82
NUP85-218ENST00000582681 CRIPTQ9P021 101 aa3.69□□□□□ -1.82
NUP85-218ENST00000582681 KRTAP10-10P60014 251 aa3.68□□□□□ -1.82
NUP85-218ENST00000582681 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
NUP85-218ENST00000582681 S4R3F8 94 aa3.65□□□□□ -1.83
NUP85-218ENST00000582681 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
NUP85-218ENST00000582681 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
NUP85-218ENST00000582681 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
NUP85-218ENST00000582681 USH2AO75445 5202 aa3.6□□□□□ -1.83
NUP85-218ENST00000582681 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
NUP85-218ENST00000582681 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.59□□□□□ -1.83
NUP85-218ENST00000582681 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
NUP85-218ENST00000582681 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
NUP85-218ENST00000582681 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
NUP85-218ENST00000582681 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
NUP85-218ENST00000582681 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
NUP85-218ENST00000582681 M0QZ58 72 aa3.53□□□□□ -1.84
NUP85-218ENST00000582681 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
NUP85-218ENST00000582681 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
NUP85-218ENST00000582681 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
NUP85-218ENST00000582681 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
NUP85-218ENST00000582681 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
NUP85-218ENST00000582681 MT1BP07438 61 aa3.48□□□□□ -1.85
NUP85-218ENST00000582681 LCE3BQ5TA77 95 aa3.46□□□□□ -1.86
NUP85-218ENST00000582681 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
NUP85-218ENST00000582681 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
NUP85-218ENST00000582681 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
NUP85-218ENST00000582681 A0A0D9SG42 100 aa3.37□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
NUP85-218ENST00000582681 R4GN34 69 aa3.34□□□□□ -1.87
NUP85-218ENST00000582681 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
NUP85-218ENST00000582681 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
NUP85-218ENST00000582681 MT1XP80297 61 aa3.29□□□□□ -1.88
NUP85-218ENST00000582681 KRTAP4-7Q9BYR0 210 aa3.29□□□□□ -1.88
NUP85-218ENST00000582681 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
NUP85-218ENST00000582681 NEBP20929 6669 aa3.27□□□□□ -1.89
NUP85-218ENST00000582681 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
NUP85-218ENST00000582681 INE1O15225 51 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms