RNA–Protein interactions for RNA: ENST00000581670.1

MTCL1-216, Transcript of microtubule crosslinking factor 1, humanhuman

Gene MTCL1, Length 2,856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-216ENST00000581670 A0A1B0GVY2 172 aa4.82□□□□□ -1.64
MTCL1-216ENST00000581670 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
MTCL1-216ENST00000581670 RYR2Q92736 4967 aa4.79□□□□□ -1.64
MTCL1-216ENST00000581670 RPS29P62273 56 aaKnown RBP4.79□□□□□ -1.64
MTCL1-216ENST00000581670 A0A1B0GU33 70 aa4.78□□□□□ -1.64
MTCL1-216ENST00000581670 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
MTCL1-216ENST00000581670 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
MTCL1-216ENST00000581670 RYR3Q15413 4870 aa4.74□□□□□ -1.65
MTCL1-216ENST00000581670 H1FX-AS1Q4G0G2 97 aa4.73□□□□□ -1.65
MTCL1-216ENST00000581670 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
MTCL1-216ENST00000581670 Q8N1X5 172 aa4.72□□□□□ -1.65
MTCL1-216ENST00000581670 TNXBP22105 4242 aa4.67□□□□□ -1.66
MTCL1-216ENST00000581670 FAT3Q8TDW7 4589 aa4.66□□□□□ -1.66
MTCL1-216ENST00000581670 LRP1Q07954 4544 aaKnown RBP4.66□□□□□ -1.66
MTCL1-216ENST00000581670 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.66
MTCL1-216ENST00000581670 HSPG2P98160 4391 aa4.63□□□□□ -1.67
MTCL1-216ENST00000581670 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
MTCL1-216ENST00000581670 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
MTCL1-216ENST00000581670 KRTAP10-8P60410 259 aa4.59□□□□□ -1.67
MTCL1-216ENST00000581670 J3QL48 77 aa4.59□□□□□ -1.68
MTCL1-216ENST00000581670 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.68
MTCL1-216ENST00000581670 HERC2O95714 4834 aa4.58□□□□□ -1.68
MTCL1-216ENST00000581670 Q5VSD8 79 aa4.57□□□□□ -1.68
MTCL1-216ENST00000581670 RYR1P21817 5038 aa4.57□□□□□ -1.68
MTCL1-216ENST00000581670 A0A0D9SG42 100 aa4.52□□□□□ -1.69
MTCL1-216ENST00000581670 MYCBP2O75592 4640 aa4.51□□□□□ -1.69
MTCL1-216ENST00000581670 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
MTCL1-216ENST00000581670 DMBT1Q9UGM3 2413 aaPredicted RBP4.5□□□□□ -1.69
MTCL1-216ENST00000581670 XP32Q5T750 250 aa4.5□□□□□ -1.69
MTCL1-216ENST00000581670 MT1HL1P0DM35 61 aa4.47□□□□□ -1.69
MTCL1-216ENST00000581670 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
MTCL1-216ENST00000581670 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
MTCL1-216ENST00000581670 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
MTCL1-216ENST00000581670 EPPK1P58107 5090 aaKnown RBP4.44□□□□□ -1.7
MTCL1-216ENST00000581670 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
MTCL1-216ENST00000581670 LPAP08519 4548 aa4.42□□□□□ -1.7
MTCL1-216ENST00000581670 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
MTCL1-216ENST00000581670 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
MTCL1-216ENST00000581670 S4R3F8 94 aa4.41□□□□□ -1.7
MTCL1-216ENST00000581670 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
MTCL1-216ENST00000581670 LRP2P98164 4655 aa4.37□□□□□ -1.71
MTCL1-216ENST00000581670 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
MTCL1-216ENST00000581670 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
MTCL1-216ENST00000581670 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
MTCL1-216ENST00000581670 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
MTCL1-216ENST00000581670 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
MTCL1-216ENST00000581670 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
MTCL1-216ENST00000581670 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
MTCL1-216ENST00000581670 KRTAP4-1Q9BYQ7 146 aa4.18□□□□□ -1.74
MTCL1-216ENST00000581670 M0QZ58 72 aa4.17□□□□□ -1.74
MTCL1-216ENST00000581670 R4GN34 69 aa4.15□□□□□ -1.74
MTCL1-216ENST00000581670 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
MTCL1-216ENST00000581670 LORP23490 312 aaPredicted RBP4.08□□□□□ -1.76
MTCL1-216ENST00000581670 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
MTCL1-216ENST00000581670 MUC2Q02817 5179 aa4.05□□□□□ -1.76
MTCL1-216ENST00000581670 INE1O15225 51 aa4□□□□□ -1.77
MTCL1-216ENST00000581670 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
MTCL1-216ENST00000581670 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
MTCL1-216ENST00000581670 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
MTCL1-216ENST00000581670 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
MTCL1-216ENST00000581670 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.77
MTCL1-216ENST00000581670 HERC1Q15751 4861 aa3.96□□□□□ -1.78
MTCL1-216ENST00000581670 HMCN2Q8NDA2 5059 aa3.95□□□□□ -1.78
MTCL1-216ENST00000581670 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
MTCL1-216ENST00000581670 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
MTCL1-216ENST00000581670 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
MTCL1-216ENST00000581670 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.79
MTCL1-216ENST00000581670 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
MTCL1-216ENST00000581670 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
MTCL1-216ENST00000581670 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
MTCL1-216ENST00000581670 MT1HP80294 61 aa3.74□□□□□ -1.81
MTCL1-216ENST00000581670 LCE2BO14633 110 aa3.74□□□□□ -1.81
MTCL1-216ENST00000581670 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
MTCL1-216ENST00000581670 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
MTCL1-216ENST00000581670 TNP1P09430 55 aa3.71□□□□□ -1.82
MTCL1-216ENST00000581670 M0R2T5 61 aa3.7□□□□□ -1.82
MTCL1-216ENST00000581670 MT1FP04733 61 aa3.68□□□□□ -1.82
MTCL1-216ENST00000581670 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
MTCL1-216ENST00000581670 MT2AP02795 61 aa3.67□□□□□ -1.82
MTCL1-216ENST00000581670 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
MTCL1-216ENST00000581670 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
MTCL1-216ENST00000581670 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
MTCL1-216ENST00000581670 MT1BP07438 61 aa3.55□□□□□ -1.84
MTCL1-216ENST00000581670 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
MTCL1-216ENST00000581670 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
MTCL1-216ENST00000581670 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
MTCL1-216ENST00000581670 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
MTCL1-216ENST00000581670 MT1XP80297 61 aa3.51□□□□□ -1.85
MTCL1-216ENST00000581670 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
MTCL1-216ENST00000581670 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
MTCL1-216ENST00000581670 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
MTCL1-216ENST00000581670 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
MTCL1-216ENST00000581670 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
MTCL1-216ENST00000581670 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
MTCL1-216ENST00000581670 USH2AO75445 5202 aa3.35□□□□□ -1.87
MTCL1-216ENST00000581670 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
MTCL1-216ENST00000581670 KRTAP4-8A0A0G2JLE6 195 aa3.3□□□□□ -1.88
MTCL1-216ENST00000581670 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
MTCL1-216ENST00000581670 KMT2DO14686 5537 aa3.28□□□□□ -1.88
MTCL1-216ENST00000581670 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 317.6 ms