RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ZNF861PO60384 105 aa1.98□□□□□ -2.09
CDH19-204ENST00000579658 hDV103S1A0JD37 113 aa1.98□□□□□ -2.09
CDH19-204ENST00000579658 K7EQZ3 153 aa1.98□□□□□ -2.09
CDH19-204ENST00000579658 UBE2AP49459 152 aa1.98□□□□□ -2.09
CDH19-204ENST00000579658 C7orf65Q6ZTY9 151 aa1.98□□□□□ -2.09
CDH19-204ENST00000579658 CYP4F30PQ9H0H9 118 aa1.98□□□□□ -2.09
CDH19-204ENST00000579658 HCG22E2RYF7 251 aa1.97□□□□□ -2.09
CDH19-204ENST00000579658 Q1T7F1 81 aa1.97□□□□□ -2.09
CDH19-204ENST00000579658 SPTSSBQ8NFR3 76 aa1.97□□□□□ -2.09
CDH19-204ENST00000579658 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
CDH19-204ENST00000579658 IGFL1Q6UW32 110 aa1.97□□□□□ -2.09
CDH19-204ENST00000579658 C1orf64Q8NEQ6 169 aa1.97□□□□□ -2.09
CDH19-204ENST00000579658 NDUFB1O75438 58 aa1.96□□□□□ -2.1
CDH19-204ENST00000579658 ASB16-AS1Q495Z4 193 aa1.96□□□□□ -2.1
CDH19-204ENST00000579658 A8MWP4 228 aa1.96□□□□□ -2.1
CDH19-204ENST00000579658 SPRR1BP22528 89 aa1.96□□□□□ -2.1
CDH19-204ENST00000579658 KRTAP13-2Q52LG2 175 aa1.96□□□□□ -2.1
CDH19-204ENST00000579658 RETNLBQ9BQ08 111 aa1.96□□□□□ -2.1
CDH19-204ENST00000579658 H3BPC8 53 aa1.95□□□□□ -2.1
CDH19-204ENST00000579658 P0C880 135 aa1.95□□□□□ -2.1
CDH19-204ENST00000579658 SPANXA2-OT1Q8N9U9 137 aa1.95□□□□□ -2.1
CDH19-204ENST00000579658 LINC00472Q9H8W2 130 aa1.95□□□□□ -2.1
CDH19-204ENST00000579658 A0A087WSZ3 146 aa1.94□□□□□ -2.1
CDH19-204ENST00000579658 TRAV22A0A0B4J277 110 aa1.94□□□□□ -2.1
CDH19-204ENST00000579658 IGLV7-46A0A075B6I9 117 aa1.94□□□□□ -2.1
CDH19-204ENST00000579658 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
CDH19-204ENST00000579658 DEFB116Q30KQ4 102 aa1.93□□□□□ -2.1
CDH19-204ENST00000579658 CASC2Q6XLA1 102 aa1.93□□□□□ -2.1
CDH19-204ENST00000579658 TYMSOSQ8TAI1 123 aa1.93□□□□□ -2.1
CDH19-204ENST00000579658 WFDC13Q8IUB5 93 aa1.92□□□□□ -2.1
CDH19-204ENST00000579658 LINC00208Q96KT6 92 aa1.92□□□□□ -2.1
CDH19-204ENST00000579658 LINC00483Q53H64 154 aa1.92□□□□□ -2.1
CDH19-204ENST00000579658 H0Y9P7 68 aa1.91□□□□□ -2.1
CDH19-204ENST00000579658 KRTAP10-6P60371 365 aaPredicted RBP1.91□□□□□ -2.1
CDH19-204ENST00000579658 MOBPQ13875 183 aa1.91□□□□□ -2.1
CDH19-204ENST00000579658 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
CDH19-204ENST00000579658 MMP24-AS1A0A0U1RRL7 71 aa1.91□□□□□ -2.1
CDH19-204ENST00000579658 Q8N9P0 234 aaPredicted RBP1.91□□□□□ -2.1
CDH19-204ENST00000579658 Q96NJ1 140 aa1.91□□□□□ -2.1
CDH19-204ENST00000579658 SSPOA2VEC9 5147 aa1.9□□□□□ -2.1
CDH19-204ENST00000579658 MT1HP80294 61 aa1.9□□□□□ -2.11
CDH19-204ENST00000579658 SPAG11AQ6PDA7 123 aa1.9□□□□□ -2.11
CDH19-204ENST00000579658 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
CDH19-204ENST00000579658 LIMD2Q9BT23 127 aa1.9□□□□□ -2.11
CDH19-204ENST00000579658 TP53AIP1Q9HCN2 124 aa1.9□□□□□ -2.11
CDH19-204ENST00000579658 ROMO1P60602 79 aa1.9□□□□□ -2.11
CDH19-204ENST00000579658 Q5VV11 94 aa1.9□□□□□ -2.11
CDH19-204ENST00000579658 LOC101927531A0A1B0GV80 90 aa1.89□□□□□ -2.11
CDH19-204ENST00000579658 A8MUU9 505 aa1.89□□□□□ -2.11
CDH19-204ENST00000579658 KRTAP13-3Q3SY46 172 aa1.88□□□□□ -2.11
CDH19-204ENST00000579658 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
CDH19-204ENST00000579658 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
CDH19-204ENST00000579658 SSBP3-AS1Q7Z2R9 100 aa1.88□□□□□ -2.11
CDH19-204ENST00000579658 A0A1B0GVX0 72 aa1.87□□□□□ -2.11
CDH19-204ENST00000579658 COA5Q86WW8 74 aa1.87□□□□□ -2.11
CDH19-204ENST00000579658 LINC01558Q9Y6Z2 57 aa1.87□□□□□ -2.11
CDH19-204ENST00000579658 CHKB-CPT1BH3BT56 60 aa1.86□□□□□ -2.11
CDH19-204ENST00000579658 M0R2T5 61 aa1.86□□□□□ -2.11
CDH19-204ENST00000579658 MRPL34Q9BQ48 92 aaKnown RBP1.86□□□□□ -2.11
CDH19-204ENST00000579658 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
CDH19-204ENST00000579658 ATP11AUNQ6ZP68 121 aa1.86□□□□□ -2.11
CDH19-204ENST00000579658 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
CDH19-204ENST00000579658 SPINK1P00995 79 aa1.85□□□□□ -2.11
CDH19-204ENST00000579658 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
CDH19-204ENST00000579658 PRR15LQ9BU68 103 aa1.85□□□□□ -2.11
CDH19-204ENST00000579658 HRES1P13985 223 aa1.85□□□□□ -2.11
CDH19-204ENST00000579658 RPS29P62273 56 aaKnown RBP1.85□□□□□ -2.11
CDH19-204ENST00000579658 PCOTHQ58A44 107 aa1.85□□□□□ -2.11
CDH19-204ENST00000579658 CSAG1Q6PB30 78 aa1.85□□□□□ -2.11
CDH19-204ENST00000579658 IGKV2-30P06310 120 aa1.84□□□□□ -2.11
CDH19-204ENST00000579658 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.11
CDH19-204ENST00000579658 LCE1EQ5T753 118 aa1.84□□□□□ -2.12
CDH19-204ENST00000579658 Q5W150 140 aa1.83□□□□□ -2.12
CDH19-204ENST00000579658 C9orf92A6NGG3 77 aa1.83□□□□□ -2.12
CDH19-204ENST00000579658 MIR22HGQ0VDD5 57 aa1.83□□□□□ -2.12
CDH19-204ENST00000579658 C20orf166-AS1Q96NR2 134 aa1.83□□□□□ -2.12
CDH19-204ENST00000579658 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
CDH19-204ENST00000579658 ACYP2P14621 99 aa1.82□□□□□ -2.12
CDH19-204ENST00000579658 COX6B2Q6YFQ2 88 aa1.82□□□□□ -2.12
CDH19-204ENST00000579658 USH2AO75445 5202 aa1.81□□□□□ -2.12
CDH19-204ENST00000579658 SPINK7P58062 85 aa1.81□□□□□ -2.12
CDH19-204ENST00000579658 DMAC1Q96GE9 116 aa1.81□□□□□ -2.12
CDH19-204ENST00000579658 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
CDH19-204ENST00000579658 CAMK2N1Q7Z7J9 78 aa1.8□□□□□ -2.12
CDH19-204ENST00000579658 KRTAP19-6Q3LI70 58 aa1.78□□□□□ -2.12
CDH19-204ENST00000579658 SPATA8Q6RVD6 105 aa1.78□□□□□ -2.12
CDH19-204ENST00000579658 NEBP20929 6669 aa1.77□□□□□ -2.13
CDH19-204ENST00000579658 IGKV2D-30A0A075B6S6 120 aa1.77□□□□□ -2.13
CDH19-204ENST00000579658 K7ERS5 55 aa1.77□□□□□ -2.13
CDH19-204ENST00000579658 KRTAP25-1Q3LHN0 102 aa1.77□□□□□ -2.13
CDH19-204ENST00000579658 A0A1B0GU69 56 aa1.76□□□□□ -2.13
CDH19-204ENST00000579658 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
CDH19-204ENST00000579658 FLGP20930 4061 aaPredicted RBP1.76□□□□□ -2.13
CDH19-204ENST00000579658 UQCR11O14957 56 aa1.75□□□□□ -2.13
CDH19-204ENST00000579658 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
CDH19-204ENST00000579658 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
CDH19-204ENST00000579658 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CDH19-204ENST00000579658 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
CDH19-204ENST00000579658 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
CDH19-204ENST00000579658 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms