RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 RPL39LQ96EH5 51 aaKnown RBP1.06□□□□□ -2.24
PTPRM-209ENST00000578698 TRRAPQ9Y4A5 3859 aa1.06□□□□□ -2.24
PTPRM-209ENST00000578698 UBR4Q5T4S7 5183 aa1.05□□□□□ -2.24
PTPRM-209ENST00000578698 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
PTPRM-209ENST00000578698 COL7A1Q02388 2944 aa1.04□□□□□ -2.24
PTPRM-209ENST00000578698 A0A0D9SG42 100 aa1.04□□□□□ -2.24
PTPRM-209ENST00000578698 DEFB133Q30KQ1 61 aa1.04□□□□□ -2.24
PTPRM-209ENST00000578698 H1FX-AS1Q4G0G2 97 aa1.04□□□□□ -2.24
PTPRM-209ENST00000578698 SPINK9Q5DT21 86 aa1.04□□□□□ -2.24
PTPRM-209ENST00000578698 Q5VSD8 79 aa1.04□□□□□ -2.24
PTPRM-209ENST00000578698 U3KQA8 63 aa1.04□□□□□ -2.24
PTPRM-209ENST00000578698 EPPK1P58107 5090 aaKnown RBP1.03□□□□□ -2.24
PTPRM-209ENST00000578698 PRKDCP78527 4128 aaKnown RBP1.03□□□□□ -2.24
PTPRM-209ENST00000578698 MMP24-AS1A0A0U1RRL7 71 aa1.03□□□□□ -2.24
PTPRM-209ENST00000578698 DEFB130BP0DP73 79 aa1.03□□□□□ -2.24
PTPRM-209ENST00000578698 DEFB130AP0DP74 79 aa1.03□□□□□ -2.24
PTPRM-209ENST00000578698 HYDINQ4G0P3 5121 aa1.03□□□□□ -2.24
PTPRM-209ENST00000578698 K7EIM0 57 aa1.02□□□□□ -2.25
PTPRM-209ENST00000578698 HERC2O95714 4834 aa1.02□□□□□ -2.25
PTPRM-209ENST00000578698 STATHP02808 62 aa1.02□□□□□ -2.25
PTPRM-209ENST00000578698 PRB3Q04118 309 aaPredicted RBP1.02□□□□□ -2.25
PTPRM-209ENST00000578698 WT1-ASQ06250 92 aa1.02□□□□□ -2.25
PTPRM-209ENST00000578698 C10orf95Q9H7T3 257 aa1.02□□□□□ -2.25
PTPRM-209ENST00000578698 RYR2Q92736 4967 aa1.01□□□□□ -2.25
PTPRM-209ENST00000578698 H3BUA1 57 aa1.01□□□□□ -2.25
PTPRM-209ENST00000578698 SPRR1AP35321 89 aa1.01□□□□□ -2.25
PTPRM-209ENST00000578698 KLK9Q2XQG4 91 aa1.01□□□□□ -2.25
PTPRM-209ENST00000578698 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
PTPRM-209ENST00000578698 TMEM167AQ8TBQ9 72 aa1.01□□□□□ -2.25
PTPRM-209ENST00000578698 H3BSH0 61 aa1□□□□□ -2.25
PTPRM-209ENST00000578698 LELP1Q5T871 98 aa1□□□□□ -2.25
PTPRM-209ENST00000578698 CLPSL2Q6UWE3 100 aa1□□□□□ -2.25
PTPRM-209ENST00000578698 WFDC10BQ8IUB3 73 aa1□□□□□ -2.25
PTPRM-209ENST00000578698 KIAA1109Q2LD37 5005 aa1□□□□□ -2.25
PTPRM-209ENST00000578698 LEAP2Q969E1 77 aa0.99□□□□□ -2.25
PTPRM-209ENST00000578698 HERC1Q15751 4861 aa0.98□□□□□ -2.25
PTPRM-209ENST00000578698 KAAG1Q9UBP8 84 aa0.97□□□□□ -2.25
PTPRM-209ENST00000578698 SRRM2Q9UQ35 2752 aaKnown RBP0.97□□□□□ -2.25
PTPRM-209ENST00000578698 SPRR1BP22528 89 aa0.96□□□□□ -2.26
PTPRM-209ENST00000578698 MUC2Q02817 5179 aa0.96□□□□□ -2.26
PTPRM-209ENST00000578698 CMYA5Q8N3K9 4069 aa0.95□□□□□ -2.26
PTPRM-209ENST00000578698 DEFB106AQ8N104 65 aa0.95□□□□□ -2.26
PTPRM-209ENST00000578698 CSMD3Q7Z407 3707 aa0.95□□□□□ -2.26
PTPRM-209ENST00000578698 LYSTQ99698 3801 aa0.95□□□□□ -2.26
PTPRM-209ENST00000578698 DEFB108AA8MXU0 73 aa0.94□□□□□ -2.26
PTPRM-209ENST00000578698 DEFB105AQ8NG35 78 aa0.94□□□□□ -2.26
PTPRM-209ENST00000578698 S4R3F8 94 aa0.94□□□□□ -2.26
PTPRM-209ENST00000578698 ABCA13Q86UQ4 5058 aa0.94□□□□□ -2.26
PTPRM-209ENST00000578698 DNAH1Q9P2D7 4330 aa0.94□□□□□ -2.26
PTPRM-209ENST00000578698 A8MTW9 85 aa0.93□□□□□ -2.26
PTPRM-209ENST00000578698 PRO0255Q9UI72 69 aa0.93□□□□□ -2.26
PTPRM-209ENST00000578698 APLNQ9ULZ1 77 aa0.93□□□□□ -2.26
PTPRM-209ENST00000578698 HECTD4Q9Y4D8 3996 aa0.92□□□□□ -2.26
PTPRM-209ENST00000578698 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
PTPRM-209ENST00000578698 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
PTPRM-209ENST00000578698 ANK3Q12955 4377 aaKnown RBP0.92□□□□□ -2.26
PTPRM-209ENST00000578698 RPL39P5Q59GN2 51 aa0.91□□□□□ -2.26
PTPRM-209ENST00000578698 DEFB104AQ8WTQ1 72 aa0.91□□□□□ -2.26
PTPRM-209ENST00000578698 NOP10Q9NPE3 64 aaKnown RBP0.91□□□□□ -2.26
PTPRM-209ENST00000578698 SACSQ9NZJ4 4579 aa0.91□□□□□ -2.26
PTPRM-209ENST00000578698 HRNRQ86YZ3 2850 aaPredicted RBP0.9□□□□□ -2.26
PTPRM-209ENST00000578698 DYNC2H1Q8NCM8 4307 aaKnown RBP0.89□□□□□ -2.27
PTPRM-209ENST00000578698 PRLHP81277 87 aa0.89□□□□□ -2.27
PTPRM-209ENST00000578698 TOMM7Q9P0U1 55 aa0.89□□□□□ -2.27
PTPRM-209ENST00000578698 PKHD1P08F94 4074 aa0.88□□□□□ -2.27
PTPRM-209ENST00000578698 COX14Q96I36 57 aa0.88□□□□□ -2.27
PTPRM-209ENST00000578698 DNAH7Q8WXX0 4024 aa0.87□□□□□ -2.27
PTPRM-209ENST00000578698 FAT4Q6V0I7 4981 aa0.87□□□□□ -2.27
PTPRM-209ENST00000578698 KMT2AQ03164 3969 aa0.87□□□□□ -2.27
PTPRM-209ENST00000578698 DNAH11Q96DT5 4516 aa0.87□□□□□ -2.27
PTPRM-209ENST00000578698 M0QZ58 72 aa0.86□□□□□ -2.27
PTPRM-209ENST00000578698 VPS13DQ5THJ4 4388 aa0.86□□□□□ -2.27
PTPRM-209ENST00000578698 STARD9Q9P2P6 4700 aa0.86□□□□□ -2.27
PTPRM-209ENST00000578698 RNF213Q63HN8 5207 aa0.84□□□□□ -2.27
PTPRM-209ENST00000578698 MYCBP2O75592 4640 aa0.84□□□□□ -2.27
PTPRM-209ENST00000578698 H3BUX3 64 aa0.84□□□□□ -2.27
PTPRM-209ENST00000578698 DEFB110Q30KQ9 67 aa0.84□□□□□ -2.27
PTPRM-209ENST00000578698 DEFB108BQ8NET1 73 aa0.84□□□□□ -2.27
PTPRM-209ENST00000578698 HUWE1Q7Z6Z7 4374 aaKnown RBP0.84□□□□□ -2.28
PTPRM-209ENST00000578698 HMCN2Q8NDA2 5059 aa0.83□□□□□ -2.28
PTPRM-209ENST00000578698 HSPG2P98160 4391 aa0.83□□□□□ -2.28
PTPRM-209ENST00000578698 DNAH9Q9NYC9 4486 aa0.83□□□□□ -2.28
PTPRM-209ENST00000578698 KRTAP20-1Q3LI63 56 aa0.83□□□□□ -2.28
PTPRM-209ENST00000578698 MACF1Q9UPN3 7388 aaKnown RBP0.83□□□□□ -2.28
PTPRM-209ENST00000578698 DNAH3Q8TD57 4116 aa0.83□□□□□ -2.28
PTPRM-209ENST00000578698 LRP2P98164 4655 aa0.82□□□□□ -2.28
PTPRM-209ENST00000578698 SYNE2Q8WXH0 6885 aaKnown RBP0.82□□□□□ -2.28
PTPRM-209ENST00000578698 H0YGG7 62 aa0.82□□□□□ -2.28
PTPRM-209ENST00000578698 FAT2Q9NYQ8 4349 aa0.8□□□□□ -2.28
PTPRM-209ENST00000578698 DNAH8Q96JB1 4490 aa0.8□□□□□ -2.28
PTPRM-209ENST00000578698 NEBP20929 6669 aa0.8□□□□□ -2.28
PTPRM-209ENST00000578698 SPINK1P00995 79 aa0.8□□□□□ -2.28
PTPRM-209ENST00000578698 KRTAP2-3P0C7H8 128 aa0.8□□□□□ -2.28
PTPRM-209ENST00000578698 KRTAP2-4Q9BYR9 128 aa0.8□□□□□ -2.28
PTPRM-209ENST00000578698 KRTAP2-1Q9BYU5 128 aa0.8□□□□□ -2.28
PTPRM-209ENST00000578698 PLECQ15149 4684 aaKnown RBP0.8□□□□□ -2.28
PTPRM-209ENST00000578698 DYNC1H1Q14204 4646 aaKnown RBP0.79□□□□□ -2.28
PTPRM-209ENST00000578698 VPS13BQ7Z7G8 4022 aa0.79□□□□□ -2.28
PTPRM-209ENST00000578698 APOBP04114 4563 aaKnown RBP0.79□□□□□ -2.28
PTPRM-209ENST00000578698 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms