RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 FAM236AA0A1B0GUQ0 79 aa2.26□□□□□ -2.05
PTPRM-208ENST00000578600 FAM236BA0A1B0GV22 79 aa2.26□□□□□ -2.05
PTPRM-208ENST00000578600 J3KT08 172 aa2.26□□□□□ -2.05
PTPRM-208ENST00000578600 NDUFB1O75438 58 aa2.26□□□□□ -2.05
PTPRM-208ENST00000578600 CLLU1Q5K131 121 aa2.26□□□□□ -2.05
PTPRM-208ENST00000578600 H0YGX0 51 aa2.25□□□□□ -2.05
PTPRM-208ENST00000578600 SPRR2EP22531 72 aa2.25□□□□□ -2.05
PTPRM-208ENST00000578600 SPRR2BP35325 72 aa2.25□□□□□ -2.05
PTPRM-208ENST00000578600 SPRR2AP35326 72 aa2.25□□□□□ -2.05
PTPRM-208ENST00000578600 H3BMG7 143 aa2.24□□□□□ -2.05
PTPRM-208ENST00000578600 H3BUT2 72 aa2.24□□□□□ -2.05
PTPRM-208ENST00000578600 FABP4P15090 132 aa2.24□□□□□ -2.05
PTPRM-208ENST00000578600 LINC01545Q5VT33 79 aa2.24□□□□□ -2.05
PTPRM-208ENST00000578600 HIST3H2BBQ8N257 126 aa2.24□□□□□ -2.05
PTPRM-208ENST00000578600 SVBPQ8N300 66 aa2.24□□□□□ -2.05
PTPRM-208ENST00000578600 A0A1B0GX51 115 aa2.23□□□□□ -2.05
PTPRM-208ENST00000578600 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
PTPRM-208ENST00000578600 C7orf65Q6ZTY9 151 aa2.23□□□□□ -2.05
PTPRM-208ENST00000578600 MUSTN1Q8IVN3 82 aa2.23□□□□□ -2.05
PTPRM-208ENST00000578600 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
PTPRM-208ENST00000578600 PMCHL2Q9BQD1 86 aa2.23□□□□□ -2.05
PTPRM-208ENST00000578600 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
PTPRM-208ENST00000578600 IGKV3D-7A0A0C4DH55 119 aa2.22□□□□□ -2.05
PTPRM-208ENST00000578600 SYS1-DBNDD2H3BUS1 97 aa2.22□□□□□ -2.05
PTPRM-208ENST00000578600 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
PTPRM-208ENST00000578600 SPRR2GQ9BYE4 73 aa2.22□□□□□ -2.05
PTPRM-208ENST00000578600 TRACP01848 142 aa2.21□□□□□ -2.06
PTPRM-208ENST00000578600 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
PTPRM-208ENST00000578600 COA5Q86WW8 74 aa2.21□□□□□ -2.06
PTPRM-208ENST00000578600 FABP2P12104 132 aa2.2□□□□□ -2.06
PTPRM-208ENST00000578600 SPRR2DP22532 72 aa2.2□□□□□ -2.06
PTPRM-208ENST00000578600 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
PTPRM-208ENST00000578600 PRR15Q8IV56 129 aa2.2□□□□□ -2.06
PTPRM-208ENST00000578600 LINC00472Q9H8W2 130 aa2.2□□□□□ -2.06
PTPRM-208ENST00000578600 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
PTPRM-208ENST00000578600 LINC01554Q52M75 96 aa2.19□□□□□ -2.06
PTPRM-208ENST00000578600 LCA10Q71F78 164 aa2.19□□□□□ -2.06
PTPRM-208ENST00000578600 TMEM256-PLSCR3K7ERE1 68 aa2.18□□□□□ -2.06
PTPRM-208ENST00000578600 DNAL4O96015 105 aa2.18□□□□□ -2.06
PTPRM-208ENST00000578600 APOC3P02656 99 aa2.18□□□□□ -2.06
PTPRM-208ENST00000578600 CCKP06307 115 aa2.18□□□□□ -2.06
PTPRM-208ENST00000578600 MT1BP07438 61 aa2.18□□□□□ -2.06
PTPRM-208ENST00000578600 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
PTPRM-208ENST00000578600 K7EQZ3 153 aa2.16□□□□□ -2.06
PTPRM-208ENST00000578600 KLKP1Q107X0 134 aa2.16□□□□□ -2.06
PTPRM-208ENST00000578600 Q6ZQT0 140 aa2.16□□□□□ -2.06
PTPRM-208ENST00000578600 HIST1H2BLQ99880 126 aa2.16□□□□□ -2.06
PTPRM-208ENST00000578600 Q1T7F1 81 aa2.15□□□□□ -2.07
PTPRM-208ENST00000578600 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
PTPRM-208ENST00000578600 ORMDL1Q9P0S3 153 aa2.15□□□□□ -2.07
PTPRM-208ENST00000578600 COX6CP09669 75 aa2.13□□□□□ -2.07
PTPRM-208ENST00000578600 S4R3F8 94 aa2.13□□□□□ -2.07
PTPRM-208ENST00000578600 KRTDAPP60985 99 aa2.12□□□□□ -2.07
PTPRM-208ENST00000578600 RBM3P98179 157 aaKnown RBP2.12□□□□□ -2.07
PTPRM-208ENST00000578600 TMEM254Q8TBM7 123 aa2.12□□□□□ -2.07
PTPRM-208ENST00000578600 PLAC4Q8WY50 150 aa2.12□□□□□ -2.07
PTPRM-208ENST00000578600 PDE6GP18545 87 aa2.11□□□□□ -2.07
PTPRM-208ENST00000578600 MRPL34Q9BQ48 92 aaKnown RBP2.11□□□□□ -2.07
PTPRM-208ENST00000578600 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
PTPRM-208ENST00000578600 C9JAW5 83 aa2.1□□□□□ -2.07
PTPRM-208ENST00000578600 NAA38Q9BRA0 125 aaKnown RBP2.1□□□□□ -2.07
PTPRM-208ENST00000578600 VPS25Q9BRG1 176 aa2.1□□□□□ -2.07
PTPRM-208ENST00000578600 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
PTPRM-208ENST00000578600 PRO1854Q9UHT4 67 aa2.09□□□□□ -2.07
PTPRM-208ENST00000578600 hDV103S1A0JD37 113 aa2.08□□□□□ -2.08
PTPRM-208ENST00000578600 TAX1BP3O14907 124 aa2.08□□□□□ -2.08
PTPRM-208ENST00000578600 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
PTPRM-208ENST00000578600 SMIM20Q8N5G0 67 aa2.07□□□□□ -2.08
PTPRM-208ENST00000578600 JMJD7-PLA2G4BH0Y9G9 81 aa2.06□□□□□ -2.08
PTPRM-208ENST00000578600 DLEU1O43261 78 aa2.06□□□□□ -2.08
PTPRM-208ENST00000578600 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
PTPRM-208ENST00000578600 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
PTPRM-208ENST00000578600 NREPQ16612 68 aa2.05□□□□□ -2.08
PTPRM-208ENST00000578600 H0YAA0 97 aa2.04□□□□□ -2.08
PTPRM-208ENST00000578600 ATOH7Q8N100 152 aa2.04□□□□□ -2.08
PTPRM-208ENST00000578600 HIGD1BQ9P298 99 aa2.04□□□□□ -2.08
PTPRM-208ENST00000578600 A0A1B0GV72 72 aa2.03□□□□□ -2.08
PTPRM-208ENST00000578600 C20orf197Q8N268 126 aa2.03□□□□□ -2.08
PTPRM-208ENST00000578600 NDUFC1O43677 76 aa2.02□□□□□ -2.09
PTPRM-208ENST00000578600 COX8AP10176 69 aa2.02□□□□□ -2.09
PTPRM-208ENST00000578600 LOC110117498A0A087WWA1 95 aa2.01□□□□□ -2.09
PTPRM-208ENST00000578600 MMP24-AS1A0A0U1RRL7 71 aa2.01□□□□□ -2.09
PTPRM-208ENST00000578600 HCG22E2RYF7 251 aa2.01□□□□□ -2.09
PTPRM-208ENST00000578600 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
PTPRM-208ENST00000578600 VAMP8Q9BV40 100 aa2.01□□□□□ -2.09
PTPRM-208ENST00000578600 C14orf132Q9NPU4 83 aa2.01□□□□□ -2.09
PTPRM-208ENST00000578600 MT1XP80297 61 aa2□□□□□ -2.09
PTPRM-208ENST00000578600 CASC2Q6XLA1 102 aa2□□□□□ -2.09
PTPRM-208ENST00000578600 CYSTM1Q9H1C7 97 aa1.99□□□□□ -2.09
PTPRM-208ENST00000578600 TP53AIP1Q9HCN2 124 aa1.99□□□□□ -2.09
PTPRM-208ENST00000578600 SNURFQ9Y675 71 aa1.98□□□□□ -2.09
PTPRM-208ENST00000578600 ATXN8Q156A1 80 aa1.96□□□□□ -2.1
PTPRM-208ENST00000578600 S100A1P23297 94 aa1.95□□□□□ -2.1
PTPRM-208ENST00000578600 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
PTPRM-208ENST00000578600 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
PTPRM-208ENST00000578600 ACYP1P07311 99 aa1.93□□□□□ -2.1
PTPRM-208ENST00000578600 HSD52Q0P140 79 aa1.93□□□□□ -2.1
PTPRM-208ENST00000578600 C14orf144Q96I85 54 aa1.93□□□□□ -2.1
PTPRM-208ENST00000578600 SPATA45Q537H7 98 aa1.91□□□□□ -2.1
PTPRM-208ENST00000578600 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms