RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 KRTAP3-3Q9BYR6 98 aa5.32□□□□□ -1.56
GGA3-204ENST00000578208 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
GGA3-204ENST00000578208 H3BPC8 53 aa5.31□□□□□ -1.56
GGA3-204ENST00000578208 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
GGA3-204ENST00000578208 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
GGA3-204ENST00000578208 K7ERU9 68 aa5.29□□□□□ -1.56
GGA3-204ENST00000578208 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
GGA3-204ENST00000578208 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
GGA3-204ENST00000578208 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
GGA3-204ENST00000578208 Q5VV11 94 aa5.24□□□□□ -1.57
GGA3-204ENST00000578208 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
GGA3-204ENST00000578208 MT-ATP8P03928 68 aa5.23□□□□□ -1.57
GGA3-204ENST00000578208 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
GGA3-204ENST00000578208 H0YAA0 97 aa5.22□□□□□ -1.57
GGA3-204ENST00000578208 SMIM20Q8N5G0 67 aa5.21□□□□□ -1.58
GGA3-204ENST00000578208 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
GGA3-204ENST00000578208 DMAC1Q96GE9 116 aa5.19□□□□□ -1.58
GGA3-204ENST00000578208 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
GGA3-204ENST00000578208 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
GGA3-204ENST00000578208 MT1BP07438 61 aa5.16□□□□□ -1.58
GGA3-204ENST00000578208 A6NN06 94 aa5.14□□□□□ -1.59
GGA3-204ENST00000578208 C20orf197Q8N268 126 aa5.13□□□□□ -1.59
GGA3-204ENST00000578208 ACYP2P14621 99 aa5.1□□□□□ -1.59
GGA3-204ENST00000578208 SPTSSBQ8NFR3 76 aa5.07□□□□□ -1.6
GGA3-204ENST00000578208 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
GGA3-204ENST00000578208 SNURFQ9Y675 71 aa5.06□□□□□ -1.6
GGA3-204ENST00000578208 R4GN34 69 aa5.06□□□□□ -1.6
GGA3-204ENST00000578208 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
GGA3-204ENST00000578208 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
GGA3-204ENST00000578208 SERP2Q8N6R1 65 aa5.03□□□□□ -1.6
GGA3-204ENST00000578208 M0QZ58 72 aa5.02□□□□□ -1.61
GGA3-204ENST00000578208 P0C880 135 aa5.02□□□□□ -1.61
GGA3-204ENST00000578208 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
GGA3-204ENST00000578208 PLAC4Q8WY50 150 aa5□□□□□ -1.61
GGA3-204ENST00000578208 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
GGA3-204ENST00000578208 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
GGA3-204ENST00000578208 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
GGA3-204ENST00000578208 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
GGA3-204ENST00000578208 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
GGA3-204ENST00000578208 COX7CP15954 63 aa4.89□□□□□ -1.63
GGA3-204ENST00000578208 MT1XP80297 61 aa4.86□□□□□ -1.63
GGA3-204ENST00000578208 COA5Q86WW8 74 aa4.85□□□□□ -1.63
GGA3-204ENST00000578208 SEC61GP60059 68 aa4.8□□□□□ -1.64
GGA3-204ENST00000578208 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
GGA3-204ENST00000578208 ANAPC13Q9BS18 74 aa4.78□□□□□ -1.64
GGA3-204ENST00000578208 SERP1Q9Y6X1 66 aa4.78□□□□□ -1.64
GGA3-204ENST00000578208 H7BZZ5 65 aa4.77□□□□□ -1.65
GGA3-204ENST00000578208 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
GGA3-204ENST00000578208 CYSTM1Q9H1C7 97 aa4.74□□□□□ -1.65
GGA3-204ENST00000578208 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
GGA3-204ENST00000578208 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
GGA3-204ENST00000578208 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
GGA3-204ENST00000578208 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
GGA3-204ENST00000578208 NEBP20929 6669 aa4.7□□□□□ -1.66
GGA3-204ENST00000578208 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
GGA3-204ENST00000578208 KMT2DO14686 5537 aa4.65□□□□□ -1.66
GGA3-204ENST00000578208 A0A1B0GU33 70 aa4.65□□□□□ -1.67
GGA3-204ENST00000578208 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
GGA3-204ENST00000578208 A0A0D9SG42 100 aa4.64□□□□□ -1.67
GGA3-204ENST00000578208 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
GGA3-204ENST00000578208 A0A1B0GU69 56 aa4.63□□□□□ -1.67
GGA3-204ENST00000578208 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
GGA3-204ENST00000578208 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
GGA3-204ENST00000578208 SPRR2EP22531 72 aa4.62□□□□□ -1.67
GGA3-204ENST00000578208 SPRR2BP35325 72 aa4.62□□□□□ -1.67
GGA3-204ENST00000578208 SPRR2AP35326 72 aa4.62□□□□□ -1.67
GGA3-204ENST00000578208 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
GGA3-204ENST00000578208 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
GGA3-204ENST00000578208 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
GGA3-204ENST00000578208 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
GGA3-204ENST00000578208 MDN1Q9NU22 5596 aa4.59□□□□□ -1.68
GGA3-204ENST00000578208 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
GGA3-204ENST00000578208 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
GGA3-204ENST00000578208 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
GGA3-204ENST00000578208 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
GGA3-204ENST00000578208 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
GGA3-204ENST00000578208 TMEM258P61165 79 aa4.51□□□□□ -1.69
GGA3-204ENST00000578208 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
GGA3-204ENST00000578208 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
GGA3-204ENST00000578208 SPRR2DP22532 72 aa4.48□□□□□ -1.69
GGA3-204ENST00000578208 A8MU10 97 aa4.45□□□□□ -1.7
GGA3-204ENST00000578208 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
GGA3-204ENST00000578208 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
GGA3-204ENST00000578208 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
GGA3-204ENST00000578208 UQCR11O14957 56 aa4.36□□□□□ -1.71
GGA3-204ENST00000578208 TNP1P09430 55 aa4.33□□□□□ -1.72
GGA3-204ENST00000578208 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
GGA3-204ENST00000578208 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
GGA3-204ENST00000578208 MT1EP04732 61 aa4.31□□□□□ -1.72
GGA3-204ENST00000578208 V9GYY9 64 aa4.29□□□□□ -1.72
GGA3-204ENST00000578208 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
GGA3-204ENST00000578208 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
GGA3-204ENST00000578208 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
GGA3-204ENST00000578208 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
GGA3-204ENST00000578208 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
GGA3-204ENST00000578208 K7ERS5 55 aa4.24□□□□□ -1.73
GGA3-204ENST00000578208 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
GGA3-204ENST00000578208 PSPHP1O15172 72 aa4.21□□□□□ -1.74
GGA3-204ENST00000578208 Q1T7F1 81 aa4.2□□□□□ -1.74
GGA3-204ENST00000578208 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms