RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 SMR3BP02814 79 aaPredicted RBP2.72□□□□□ -1.97
IFT20-205ENST00000578009 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
IFT20-205ENST00000578009 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
IFT20-205ENST00000578009 PKHD1P08F94 4074 aa2.71□□□□□ -1.98
IFT20-205ENST00000578009 APOBP04114 4563 aaKnown RBP2.71□□□□□ -1.98
IFT20-205ENST00000578009 VPS13BQ7Z7G8 4022 aa2.71□□□□□ -1.98
IFT20-205ENST00000578009 IGLV7-46A0A075B6I9 117 aa2.71□□□□□ -1.98
IFT20-205ENST00000578009 SMIM26A0A096LP01 95 aa2.71□□□□□ -1.98
IFT20-205ENST00000578009 A8MU10 97 aa2.71□□□□□ -1.98
IFT20-205ENST00000578009 NDUFS5O43920 106 aa2.71□□□□□ -1.98
IFT20-205ENST00000578009 KMT2CQ8NEZ4 4911 aaKnown RBP2.71□□□□□ -1.98
IFT20-205ENST00000578009 OXTP01178 125 aa2.7□□□□□ -1.98
IFT20-205ENST00000578009 SVIPQ8NHG7 77 aa2.7□□□□□ -1.98
IFT20-205ENST00000578009 Q5W150 140 aa2.69□□□□□ -1.98
IFT20-205ENST00000578009 FAT1Q14517 4588 aa2.68□□□□□ -1.98
IFT20-205ENST00000578009 Q5VSD8 79 aa2.66□□□□□ -1.98
IFT20-205ENST00000578009 RYR1P21817 5038 aa2.66□□□□□ -1.98
IFT20-205ENST00000578009 A8MUU9 505 aa2.65□□□□□ -1.99
IFT20-205ENST00000578009 FP248Q71RG6 208 aaPredicted RBP2.65□□□□□ -1.99
IFT20-205ENST00000578009 C20orf166-AS1Q96NR2 134 aa2.65□□□□□ -1.99
IFT20-205ENST00000578009 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
IFT20-205ENST00000578009 FLG2Q5D862 2391 aaPredicted RBP2.64□□□□□ -1.99
IFT20-205ENST00000578009 Q1T7F1 81 aa2.64□□□□□ -1.99
IFT20-205ENST00000578009 PCOTHQ58A44 107 aa2.64□□□□□ -1.99
IFT20-205ENST00000578009 V9GYY9 64 aa2.64□□□□□ -1.99
IFT20-205ENST00000578009 RYR3Q15413 4870 aa2.64□□□□□ -1.99
IFT20-205ENST00000578009 PRR4Q16378 134 aa2.63□□□□□ -1.99
IFT20-205ENST00000578009 HRES1P13985 223 aa2.62□□□□□ -1.99
IFT20-205ENST00000578009 ACYP2P14621 99 aa2.62□□□□□ -1.99
IFT20-205ENST00000578009 COA5Q86WW8 74 aa2.62□□□□□ -1.99
IFT20-205ENST00000578009 DMAC1Q96GE9 116 aa2.62□□□□□ -1.99
IFT20-205ENST00000578009 C4orf26Q17RF5 130 aa2.61□□□□□ -1.99
IFT20-205ENST00000578009 C7orf65Q6ZTY9 151 aa2.61□□□□□ -1.99
IFT20-205ENST00000578009 Q75L30 129 aa2.61□□□□□ -1.99
IFT20-205ENST00000578009 DMBT1Q9UGM3 2413 aaPredicted RBP2.6□□□□□ -1.99
IFT20-205ENST00000578009 HSPG2P98160 4391 aa2.6□□□□□ -1.99
IFT20-205ENST00000578009 KIAA1109Q2LD37 5005 aa2.6□□□□□ -1.99
IFT20-205ENST00000578009 A8MUN3 132 aa2.59□□□□□ -1.99
IFT20-205ENST00000578009 MT1HL1P0DM35 61 aa2.59□□□□□ -1.99
IFT20-205ENST00000578009 RETNLBQ9BQ08 111 aa2.59□□□□□ -1.99
IFT20-205ENST00000578009 C9orf92A6NGG3 77 aa2.58□□□□□ -2
IFT20-205ENST00000578009 LINC01558Q9Y6Z2 57 aa2.57□□□□□ -2
IFT20-205ENST00000578009 FAT3Q8TDW7 4589 aa2.57□□□□□ -2
IFT20-205ENST00000578009 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
IFT20-205ENST00000578009 CHKB-CPT1BH3BT56 60 aa2.55□□□□□ -2
IFT20-205ENST00000578009 SPINK7P58062 85 aa2.55□□□□□ -2
IFT20-205ENST00000578009 RPL37P61927 97 aaKnown RBP2.55□□□□□ -2
IFT20-205ENST00000578009 ATP11AUNQ6ZP68 121 aa2.55□□□□□ -2
IFT20-205ENST00000578009 PRAC1Q96KF2 57 aa2.55□□□□□ -2
IFT20-205ENST00000578009 TNXBP22105 4242 aa2.54□□□□□ -2
IFT20-205ENST00000578009 TPRXLQ17RH7 258 aa2.54□□□□□ -2
IFT20-205ENST00000578009 Q5VV11 94 aa2.54□□□□□ -2
IFT20-205ENST00000578009 SPTSSBQ8NFR3 76 aa2.53□□□□□ -2
IFT20-205ENST00000578009 PRO0628Q9UI54 55 aa2.53□□□□□ -2
IFT20-205ENST00000578009 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
IFT20-205ENST00000578009 PSPHP1O15172 72 aa2.52□□□□□ -2.01
IFT20-205ENST00000578009 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
IFT20-205ENST00000578009 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
IFT20-205ENST00000578009 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
IFT20-205ENST00000578009 BIRC6Q9NR09 4857 aa2.49□□□□□ -2.01
IFT20-205ENST00000578009 HERC2O95714 4834 aa2.49□□□□□ -2.01
IFT20-205ENST00000578009 BRK1Q8WUW1 75 aa2.49□□□□□ -2.01
IFT20-205ENST00000578009 A0A1B0GU69 56 aa2.48□□□□□ -2.01
IFT20-205ENST00000578009 A6NED7 52 aa2.47□□□□□ -2.01
IFT20-205ENST00000578009 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
IFT20-205ENST00000578009 SEC61GP60059 68 aa2.46□□□□□ -2.02
IFT20-205ENST00000578009 ABCA13Q86UQ4 5058 aa2.45□□□□□ -2.02
IFT20-205ENST00000578009 LCA10Q71F78 164 aa2.45□□□□□ -2.02
IFT20-205ENST00000578009 UQCR11O14957 56 aa2.44□□□□□ -2.02
IFT20-205ENST00000578009 H1FX-AS1Q4G0G2 97 aa2.44□□□□□ -2.02
IFT20-205ENST00000578009 SPATA8Q6RVD6 105 aa2.44□□□□□ -2.02
IFT20-205ENST00000578009 RBM12B-AS1Q9P1G2 102 aa2.43□□□□□ -2.02
IFT20-205ENST00000578009 S4R3F8 94 aa2.41□□□□□ -2.02
IFT20-205ENST00000578009 MIR22HGQ0VDD5 57 aa2.4□□□□□ -2.03
IFT20-205ENST00000578009 LRP2P98164 4655 aa2.39□□□□□ -2.03
IFT20-205ENST00000578009 A0A1B0GU33 70 aa2.39□□□□□ -2.03
IFT20-205ENST00000578009 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
IFT20-205ENST00000578009 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
IFT20-205ENST00000578009 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
IFT20-205ENST00000578009 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
IFT20-205ENST00000578009 A6NN06 94 aa2.36□□□□□ -2.03
IFT20-205ENST00000578009 H0YAA0 97 aa2.36□□□□□ -2.03
IFT20-205ENST00000578009 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
IFT20-205ENST00000578009 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
IFT20-205ENST00000578009 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
IFT20-205ENST00000578009 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
IFT20-205ENST00000578009 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
IFT20-205ENST00000578009 HMCN2Q8NDA2 5059 aa2.32□□□□□ -2.04
IFT20-205ENST00000578009 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
IFT20-205ENST00000578009 HERC1Q15751 4861 aa2.31□□□□□ -2.04
IFT20-205ENST00000578009 M0QZ58 72 aa2.31□□□□□ -2.04
IFT20-205ENST00000578009 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
IFT20-205ENST00000578009 LPAP08519 4548 aa2.31□□□□□ -2.04
IFT20-205ENST00000578009 K7ERS5 55 aa2.3□□□□□ -2.04
IFT20-205ENST00000578009 P0C880 135 aa2.3□□□□□ -2.04
IFT20-205ENST00000578009 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
IFT20-205ENST00000578009 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
IFT20-205ENST00000578009 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
IFT20-205ENST00000578009 CRIPTQ9P021 101 aa2.24□□□□□ -2.05
IFT20-205ENST00000578009 R4GN34 69 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 1025.7 ms