RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 IMUPQ9GZP8 106 aa10.29□□□□□ -0.76
SMARCD2-206ENST00000577990 KLKP1Q107X0 134 aa10.28□□□□□ -0.76
SMARCD2-206ENST00000577990 MT-ATP8P03928 68 aa10.27□□□□□ -0.77
SMARCD2-206ENST00000577990 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.77
SMARCD2-206ENST00000577990 H3BPC8 53 aa10.25□□□□□ -0.77
SMARCD2-206ENST00000577990 FAM236AA0A1B0GUQ0 79 aa10.24□□□□□ -0.77
SMARCD2-206ENST00000577990 FAM236BA0A1B0GV22 79 aa10.24□□□□□ -0.77
SMARCD2-206ENST00000577990 A8MUN3 132 aa10.22□□□□□ -0.77
SMARCD2-206ENST00000577990 KRTAP19-6Q3LI70 58 aa10.14□□□□□ -0.79
SMARCD2-206ENST00000577990 NDUFC1O43677 76 aa10.13□□□□□ -0.79
SMARCD2-206ENST00000577990 MACF1Q9UPN3 7388 aaKnown RBP10.11□□□□□ -0.79
SMARCD2-206ENST00000577990 SMIM20Q8N5G0 67 aa10.1□□□□□ -0.79
SMARCD2-206ENST00000577990 TRAV7A0A075B6U4 112 aa10.07□□□□□ -0.8
SMARCD2-206ENST00000577990 SYNE2Q8WXH0 6885 aaKnown RBP10.03□□□□□ -0.8
SMARCD2-206ENST00000577990 DMAC1Q96GE9 116 aa10.02□□□□□ -0.81
SMARCD2-206ENST00000577990 SPRR2GQ9BYE4 73 aa10□□□□□ -0.81
SMARCD2-206ENST00000577990 H0YAA0 97 aa9.98□□□□□ -0.81
SMARCD2-206ENST00000577990 CRIPTQ9P021 101 aa9.94□□□□□ -0.82
SMARCD2-206ENST00000577990 KRTAP19-8Q3LI54 63 aa9.9□□□□□ -0.82
SMARCD2-206ENST00000577990 Q5VV11 94 aa9.89□□□□□ -0.83
SMARCD2-206ENST00000577990 ADM2Q7Z4H4 148 aa9.88□□□□□ -0.83
SMARCD2-206ENST00000577990 MT1BP07438 61 aa9.87□□□□□ -0.83
SMARCD2-206ENST00000577990 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
SMARCD2-206ENST00000577990 ACYP2P14621 99 aa9.81□□□□□ -0.84
SMARCD2-206ENST00000577990 SERP2Q8N6R1 65 aa9.81□□□□□ -0.84
SMARCD2-206ENST00000577990 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
SMARCD2-206ENST00000577990 KRTAP6-3Q3LI67 103 aa9.71□□□□□ -0.86
SMARCD2-206ENST00000577990 P0C880 135 aa9.68□□□□□ -0.86
SMARCD2-206ENST00000577990 SPANXA2-OT1Q8N9U9 137 aa9.68□□□□□ -0.86
SMARCD2-206ENST00000577990 A6NN06 94 aa9.67□□□□□ -0.86
SMARCD2-206ENST00000577990 SPTSSBQ8NFR3 76 aa9.66□□□□□ -0.86
SMARCD2-206ENST00000577990 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
SMARCD2-206ENST00000577990 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
SMARCD2-206ENST00000577990 R4GN34 69 aa9.61□□□□□ -0.87
SMARCD2-206ENST00000577990 KRTAP10-5P60370 271 aa9.6□□□□□ -0.87
SMARCD2-206ENST00000577990 COX7CP15954 63 aa9.57□□□□□ -0.88
SMARCD2-206ENST00000577990 M0QZ58 72 aa9.55□□□□□ -0.88
SMARCD2-206ENST00000577990 MUC12Q9UKN1 5478 aa9.45□□□□□ -0.9
SMARCD2-206ENST00000577990 PLAC4Q8WY50 150 aa9.44□□□□□ -0.9
SMARCD2-206ENST00000577990 NEBP20929 6669 aa9.44□□□□□ -0.9
SMARCD2-206ENST00000577990 COA5Q86WW8 74 aa9.4□□□□□ -0.9
SMARCD2-206ENST00000577990 LINC01554Q52M75 96 aa9.39□□□□□ -0.91
SMARCD2-206ENST00000577990 H7BZZ5 65 aa9.38□□□□□ -0.91
SMARCD2-206ENST00000577990 CYSTM1Q9H1C7 97 aa9.38□□□□□ -0.91
SMARCD2-206ENST00000577990 ANAPC13Q9BS18 74 aa9.36□□□□□ -0.91
SMARCD2-206ENST00000577990 PRO2289Q9P1D8 64 aa9.34□□□□□ -0.91
SMARCD2-206ENST00000577990 MT1XP80297 61 aa9.32□□□□□ -0.92
SMARCD2-206ENST00000577990 KMT2DO14686 5537 aa9.23□□□□□ -0.93
SMARCD2-206ENST00000577990 KRTAP5-9P26371 169 aa9.22□□□□□ -0.93
SMARCD2-206ENST00000577990 MDN1Q9NU22 5596 aa9.18□□□□□ -0.94
SMARCD2-206ENST00000577990 CCDC179H3BU77 68 aa9.16□□□□□ -0.94
SMARCD2-206ENST00000577990 SEC61GP60059 68 aa9.15□□□□□ -0.94
SMARCD2-206ENST00000577990 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
SMARCD2-206ENST00000577990 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
SMARCD2-206ENST00000577990 KRTAP20-1Q3LI63 56 aa9.1□□□□□ -0.95
SMARCD2-206ENST00000577990 KRTAP12-2P59991 146 aa9.05□□□□□ -0.96
SMARCD2-206ENST00000577990 ATP5EP56381 51 aaPredicted RBP9□□□□□ -0.97
SMARCD2-206ENST00000577990 SPRR2FQ96RM1 72 aa8.97□□□□□ -0.97
SMARCD2-206ENST00000577990 A0A1B0GU33 70 aa8.96□□□□□ -0.98
SMARCD2-206ENST00000577990 A0A1B0GU69 56 aa8.91□□□□□ -0.98
SMARCD2-206ENST00000577990 SPATA8Q6RVD6 105 aa8.91□□□□□ -0.98
SMARCD2-206ENST00000577990 A0A0D9SG42 100 aa8.9□□□□□ -0.98
SMARCD2-206ENST00000577990 KRTAP10-7P60409 375 aaPredicted RBP8.89□□□□□ -0.99
SMARCD2-206ENST00000577990 KRTAP8-1Q8IUC2 63 aa8.89□□□□□ -0.99
SMARCD2-206ENST00000577990 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
SMARCD2-206ENST00000577990 SPRR2EP22531 72 aa8.87□□□□□ -0.99
SMARCD2-206ENST00000577990 SPRR2BP35325 72 aa8.87□□□□□ -0.99
SMARCD2-206ENST00000577990 SPRR2AP35326 72 aa8.87□□□□□ -0.99
SMARCD2-206ENST00000577990 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
SMARCD2-206ENST00000577990 TMEM258P61165 79 aa8.84□□□□□ -0.99
SMARCD2-206ENST00000577990 KRTAP4-8A0A0G2JLE6 195 aa8.82□□□□□ -1
SMARCD2-206ENST00000577990 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
SMARCD2-206ENST00000577990 KRTAP2-3P0C7H8 128 aa8.79□□□□□ -1
SMARCD2-206ENST00000577990 KRTAP2-4Q9BYR9 128 aa8.79□□□□□ -1
SMARCD2-206ENST00000577990 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
SMARCD2-206ENST00000577990 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
SMARCD2-206ENST00000577990 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
SMARCD2-206ENST00000577990 KRTAP12-1P59990 96 aa8.72□□□□□ -1.01
SMARCD2-206ENST00000577990 LCE1AQ5T7P2 110 aa8.71□□□□□ -1.02
SMARCD2-206ENST00000577990 LINC01558Q9Y6Z2 57 aa8.69□□□□□ -1.02
SMARCD2-206ENST00000577990 A8MU10 97 aa8.64□□□□□ -1.03
SMARCD2-206ENST00000577990 SPRR2DP22532 72 aa8.57□□□□□ -1.04
SMARCD2-206ENST00000577990 KRTAP2-2Q9BYT5 123 aa8.5□□□□□ -1.05
SMARCD2-206ENST00000577990 KRTAP2-1Q9BYU5 128 aa8.5□□□□□ -1.05
SMARCD2-206ENST00000577990 UQCR11O14957 56 aa8.43□□□□□ -1.06
SMARCD2-206ENST00000577990 LCE3BQ5TA77 95 aa8.34□□□□□ -1.07
SMARCD2-206ENST00000577990 V9GYY9 64 aa8.33□□□□□ -1.08
SMARCD2-206ENST00000577990 KRTAP19-7Q3SYF9 63 aa8.32□□□□□ -1.08
SMARCD2-206ENST00000577990 C10orf95Q9H7T3 257 aa8.31□□□□□ -1.08
SMARCD2-206ENST00000577990 Q1T7F1 81 aa8.27□□□□□ -1.09
SMARCD2-206ENST00000577990 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
SMARCD2-206ENST00000577990 MT1EP04732 61 aa8.25□□□□□ -1.09
SMARCD2-206ENST00000577990 TNP1P09430 55 aa8.25□□□□□ -1.09
SMARCD2-206ENST00000577990 PSPHP1O15172 72 aa8.24□□□□□ -1.09
SMARCD2-206ENST00000577990 KRTAP19-5Q3LI72 72 aa8.18□□□□□ -1.1
SMARCD2-206ENST00000577990 PCP4P48539 62 aa8.15□□□□□ -1.1
SMARCD2-206ENST00000577990 KRTAP19-3Q7Z4W3 81 aa8.13□□□□□ -1.11
SMARCD2-206ENST00000577990 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
SMARCD2-206ENST00000577990 LCE5AQ5TCM9 118 aa8.1□□□□□ -1.11
SMARCD2-206ENST00000577990 K7ERS5 55 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms