RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 LINC00208Q96KT6 92 aa6.37□□□□□ -1.39
GGA3-203ENST00000577435 MP68P56378 58 aa6.36□□□□□ -1.39
GGA3-203ENST00000577435 A8MUN3 132 aa6.34□□□□□ -1.39
GGA3-203ENST00000577435 KLKP1Q107X0 134 aa6.33□□□□□ -1.4
GGA3-203ENST00000577435 H3BPC8 53 aa6.32□□□□□ -1.4
GGA3-203ENST00000577435 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
GGA3-203ENST00000577435 NDUFC1O43677 76 aa6.3□□□□□ -1.4
GGA3-203ENST00000577435 IMUPQ9GZP8 106 aa6.29□□□□□ -1.4
GGA3-203ENST00000577435 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
GGA3-203ENST00000577435 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
GGA3-203ENST00000577435 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
GGA3-203ENST00000577435 H0YAA0 97 aa6.26□□□□□ -1.41
GGA3-203ENST00000577435 CRIPTQ9P021 101 aa6.26□□□□□ -1.41
GGA3-203ENST00000577435 K7ERU9 68 aa6.24□□□□□ -1.41
GGA3-203ENST00000577435 MT1BP07438 61 aa6.24□□□□□ -1.41
GGA3-203ENST00000577435 Q5VV11 94 aa6.22□□□□□ -1.41
GGA3-203ENST00000577435 MT-ATP8P03928 68 aa6.21□□□□□ -1.42
GGA3-203ENST00000577435 MACF1Q9UPN3 7388 aaKnown RBP6.2□□□□□ -1.42
GGA3-203ENST00000577435 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
GGA3-203ENST00000577435 SMIM20Q8N5G0 67 aa6.17□□□□□ -1.42
GGA3-203ENST00000577435 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
GGA3-203ENST00000577435 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
GGA3-203ENST00000577435 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
GGA3-203ENST00000577435 A6NN06 94 aa6.11□□□□□ -1.43
GGA3-203ENST00000577435 H3BS24 57 aa6.1□□□□□ -1.43
GGA3-203ENST00000577435 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
GGA3-203ENST00000577435 ACYP2P14621 99 aa6.05□□□□□ -1.44
GGA3-203ENST00000577435 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
GGA3-203ENST00000577435 C20orf197Q8N268 126 aa6.03□□□□□ -1.44
GGA3-203ENST00000577435 P0C880 135 aa6.02□□□□□ -1.45
GGA3-203ENST00000577435 R4GN34 69 aa5.98□□□□□ -1.45
GGA3-203ENST00000577435 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
GGA3-203ENST00000577435 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
GGA3-203ENST00000577435 SPTSSBQ8NFR3 76 aa5.95□□□□□ -1.46
GGA3-203ENST00000577435 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
GGA3-203ENST00000577435 M0QZ58 72 aa5.93□□□□□ -1.46
GGA3-203ENST00000577435 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
GGA3-203ENST00000577435 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
GGA3-203ENST00000577435 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
GGA3-203ENST00000577435 MT1XP80297 61 aa5.87□□□□□ -1.47
GGA3-203ENST00000577435 KRTAP5-9P26371 169 aa5.81□□□□□ -1.48
GGA3-203ENST00000577435 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
GGA3-203ENST00000577435 COX7CP15954 63 aa5.8□□□□□ -1.48
GGA3-203ENST00000577435 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
GGA3-203ENST00000577435 NEBP20929 6669 aa5.77□□□□□ -1.49
GGA3-203ENST00000577435 PCP4P48539 62 aa5.76□□□□□ -1.49
GGA3-203ENST00000577435 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
GGA3-203ENST00000577435 COA5Q86WW8 74 aa5.73□□□□□ -1.49
GGA3-203ENST00000577435 KMT2DO14686 5537 aa5.72□□□□□ -1.49
GGA3-203ENST00000577435 H7BZZ5 65 aa5.69□□□□□ -1.5
GGA3-203ENST00000577435 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
GGA3-203ENST00000577435 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
GGA3-203ENST00000577435 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
GGA3-203ENST00000577435 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
GGA3-203ENST00000577435 SEC61GP60059 68 aa5.61□□□□□ -1.51
GGA3-203ENST00000577435 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
GGA3-203ENST00000577435 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
GGA3-203ENST00000577435 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
GGA3-203ENST00000577435 ANAPC13Q9BS18 74 aa5.6□□□□□ -1.51
GGA3-203ENST00000577435 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
GGA3-203ENST00000577435 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
GGA3-203ENST00000577435 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
GGA3-203ENST00000577435 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
GGA3-203ENST00000577435 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
GGA3-203ENST00000577435 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
GGA3-203ENST00000577435 A0A1B0GU33 70 aa5.51□□□□□ -1.53
GGA3-203ENST00000577435 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
GGA3-203ENST00000577435 SPRR2EP22531 72 aa5.49□□□□□ -1.53
GGA3-203ENST00000577435 SPRR2BP35325 72 aa5.49□□□□□ -1.53
GGA3-203ENST00000577435 SPRR2AP35326 72 aa5.49□□□□□ -1.53
GGA3-203ENST00000577435 CAMK2N1Q7Z7J9 78 aa5.49□□□□□ -1.53
GGA3-203ENST00000577435 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
GGA3-203ENST00000577435 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
GGA3-203ENST00000577435 A0A0D9SG42 100 aa5.45□□□□□ -1.54
GGA3-203ENST00000577435 A0A1B0GU69 56 aa5.44□□□□□ -1.54
GGA3-203ENST00000577435 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
GGA3-203ENST00000577435 ATP5EP56381 51 aaPredicted RBP5.43□□□□□ -1.54
GGA3-203ENST00000577435 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
GGA3-203ENST00000577435 KRTAP12-1P59990 96 aa5.39□□□□□ -1.55
GGA3-203ENST00000577435 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
GGA3-203ENST00000577435 SMIM26A0A096LP01 95 aa5.36□□□□□ -1.55
GGA3-203ENST00000577435 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
GGA3-203ENST00000577435 SPRR2DP22532 72 aa5.32□□□□□ -1.56
GGA3-203ENST00000577435 TMEM258P61165 79 aa5.31□□□□□ -1.56
GGA3-203ENST00000577435 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
GGA3-203ENST00000577435 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
GGA3-203ENST00000577435 A8MU10 97 aa5.28□□□□□ -1.56
GGA3-203ENST00000577435 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
GGA3-203ENST00000577435 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
GGA3-203ENST00000577435 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
GGA3-203ENST00000577435 MT1EP04732 61 aa5.19□□□□□ -1.58
GGA3-203ENST00000577435 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
GGA3-203ENST00000577435 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
GGA3-203ENST00000577435 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
GGA3-203ENST00000577435 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
GGA3-203ENST00000577435 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
GGA3-203ENST00000577435 UQCR11O14957 56 aa5.15□□□□□ -1.59
GGA3-203ENST00000577435 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
GGA3-203ENST00000577435 TNP1P09430 55 aa5.12□□□□□ -1.59
GGA3-203ENST00000577435 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 646 ms