RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
SF3B3-215ENST00000577085 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
SF3B3-215ENST00000577085 NDUFC1O43677 76 aa6.97□□□□□ -1.29
SF3B3-215ENST00000577085 A6NN06 94 aa6.95□□□□□ -1.3
SF3B3-215ENST00000577085 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
SF3B3-215ENST00000577085 MP68P56378 58 aa6.93□□□□□ -1.3
SF3B3-215ENST00000577085 LINC00208Q96KT6 92 aa6.93□□□□□ -1.3
SF3B3-215ENST00000577085 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
SF3B3-215ENST00000577085 A8MUN3 132 aa6.92□□□□□ -1.3
SF3B3-215ENST00000577085 A0A1B0GV90 55 aa6.91□□□□□ -1.3
SF3B3-215ENST00000577085 MT1BP07438 61 aa6.91□□□□□ -1.3
SF3B3-215ENST00000577085 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
SF3B3-215ENST00000577085 J3QR89 54 aa6.88□□□□□ -1.31
SF3B3-215ENST00000577085 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
SF3B3-215ENST00000577085 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
SF3B3-215ENST00000577085 H0YAA0 97 aa6.84□□□□□ -1.31
SF3B3-215ENST00000577085 SCGB1A1P11684 91 aa6.83□□□□□ -1.32
SF3B3-215ENST00000577085 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
SF3B3-215ENST00000577085 KRTAP10-5P60370 271 aa6.79□□□□□ -1.32
SF3B3-215ENST00000577085 H3BPC8 53 aa6.78□□□□□ -1.32
SF3B3-215ENST00000577085 C20orf197Q8N268 126 aa6.7□□□□□ -1.34
SF3B3-215ENST00000577085 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
SF3B3-215ENST00000577085 R4GN34 69 aa6.67□□□□□ -1.34
SF3B3-215ENST00000577085 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
SF3B3-215ENST00000577085 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
SF3B3-215ENST00000577085 M0QZ58 72 aa6.6□□□□□ -1.35
SF3B3-215ENST00000577085 P0C880 135 aa6.59□□□□□ -1.35
SF3B3-215ENST00000577085 SMIM20Q8N5G0 67 aa6.59□□□□□ -1.35
SF3B3-215ENST00000577085 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
SF3B3-215ENST00000577085 NEBP20929 6669 aa6.58□□□□□ -1.36
SF3B3-215ENST00000577085 TRAV7A0A075B6U4 112 aa6.57□□□□□ -1.36
SF3B3-215ENST00000577085 K7ERU9 68 aa6.57□□□□□ -1.36
SF3B3-215ENST00000577085 ACYP2P14621 99 aa6.57□□□□□ -1.36
SF3B3-215ENST00000577085 MT-ATP8P03928 68 aa6.55□□□□□ -1.36
SF3B3-215ENST00000577085 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
SF3B3-215ENST00000577085 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
SF3B3-215ENST00000577085 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
SF3B3-215ENST00000577085 CHKB-CPT1BH3BT56 60 aa6.5□□□□□ -1.37
SF3B3-215ENST00000577085 MT1XP80297 61 aa6.5□□□□□ -1.37
SF3B3-215ENST00000577085 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
SF3B3-215ENST00000577085 KMT2DO14686 5537 aa6.43□□□□□ -1.38
SF3B3-215ENST00000577085 SNURFQ9Y675 71 aa6.43□□□□□ -1.38
SF3B3-215ENST00000577085 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
SF3B3-215ENST00000577085 KRTAP20-1Q3LI63 56 aa6.4□□□□□ -1.38
SF3B3-215ENST00000577085 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
SF3B3-215ENST00000577085 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
SF3B3-215ENST00000577085 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
SF3B3-215ENST00000577085 SPANXA2-OT1Q8N9U9 137 aa6.33□□□□□ -1.4
SF3B3-215ENST00000577085 SERP2Q8N6R1 65 aa6.32□□□□□ -1.4
SF3B3-215ENST00000577085 SPRR2EP22531 72 aa6.31□□□□□ -1.4
SF3B3-215ENST00000577085 SPRR2BP35325 72 aa6.31□□□□□ -1.4
SF3B3-215ENST00000577085 SPRR2AP35326 72 aa6.31□□□□□ -1.4
SF3B3-215ENST00000577085 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
SF3B3-215ENST00000577085 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
SF3B3-215ENST00000577085 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
SF3B3-215ENST00000577085 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
SF3B3-215ENST00000577085 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-215ENST00000577085 SEC61GP60059 68 aa6.17□□□□□ -1.42
SF3B3-215ENST00000577085 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
SF3B3-215ENST00000577085 COA5Q86WW8 74 aa6.17□□□□□ -1.42
SF3B3-215ENST00000577085 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
SF3B3-215ENST00000577085 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
SF3B3-215ENST00000577085 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
SF3B3-215ENST00000577085 KRTAP13-4Q3LI77 160 aa6.12□□□□□ -1.43
SF3B3-215ENST00000577085 SPRR2DP22532 72 aa6.11□□□□□ -1.43
SF3B3-215ENST00000577085 COX7CP15954 63 aa6.1□□□□□ -1.43
SF3B3-215ENST00000577085 A0A0D9SG42 100 aa6.04□□□□□ -1.44
SF3B3-215ENST00000577085 KRTAP2-2Q9BYT5 123 aa6.02□□□□□ -1.45
SF3B3-215ENST00000577085 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
SF3B3-215ENST00000577085 A0A1B0GU33 70 aa6□□□□□ -1.45
SF3B3-215ENST00000577085 H7BZZ5 65 aa5.99□□□□□ -1.45
SF3B3-215ENST00000577085 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
SF3B3-215ENST00000577085 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
SF3B3-215ENST00000577085 CYSTM1Q9H1C7 97 aa5.95□□□□□ -1.46
SF3B3-215ENST00000577085 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
SF3B3-215ENST00000577085 A0A1B0GU69 56 aa5.91□□□□□ -1.46
SF3B3-215ENST00000577085 ANAPC13Q9BS18 74 aa5.91□□□□□ -1.46
SF3B3-215ENST00000577085 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
SF3B3-215ENST00000577085 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
SF3B3-215ENST00000577085 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
SF3B3-215ENST00000577085 MT1EP04732 61 aa5.76□□□□□ -1.49
SF3B3-215ENST00000577085 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
SF3B3-215ENST00000577085 A8MU10 97 aa5.74□□□□□ -1.49
SF3B3-215ENST00000577085 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
SF3B3-215ENST00000577085 ATP5EP56381 51 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-215ENST00000577085 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
SF3B3-215ENST00000577085 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
SF3B3-215ENST00000577085 PCP4P48539 62 aa5.71□□□□□ -1.5
SF3B3-215ENST00000577085 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
SF3B3-215ENST00000577085 TNP1P09430 55 aa5.64□□□□□ -1.51
SF3B3-215ENST00000577085 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
SF3B3-215ENST00000577085 MT1GP13640 62 aa5.61□□□□□ -1.51
SF3B3-215ENST00000577085 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
SF3B3-215ENST00000577085 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
SF3B3-215ENST00000577085 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
SF3B3-215ENST00000577085 TMEM258P61165 79 aa5.56□□□□□ -1.52
SF3B3-215ENST00000577085 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
SF3B3-215ENST00000577085 UQCR11O14957 56 aa5.53□□□□□ -1.52
SF3B3-215ENST00000577085 MT1LQ93083 61 aa5.5□□□□□ -1.53
SF3B3-215ENST00000577085 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms