RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 KLKP1Q107X0 134 aa10.76□□□□□ -0.69
SNF8-217ENST00000576353 H3BPC8 53 aa10.75□□□□□ -0.69
SNF8-217ENST00000576353 K7ERU9 68 aa10.75□□□□□ -0.69
SNF8-217ENST00000576353 IMUPQ9GZP8 106 aa10.74□□□□□ -0.69
SNF8-217ENST00000576353 NDUFC1O43677 76 aa10.71□□□□□ -0.69
SNF8-217ENST00000576353 KRTAP19-6Q3LI70 58 aa10.71□□□□□ -0.69
SNF8-217ENST00000576353 FCGBPQ9Y6R7 5405 aaPredicted RBP10.66□□□□□ -0.7
SNF8-217ENST00000576353 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.66□□□□□ -0.7
SNF8-217ENST00000576353 MT-ATP8P03928 68 aa10.64□□□□□ -0.71
SNF8-217ENST00000576353 SPRR2GQ9BYE4 73 aa10.61□□□□□ -0.71
SNF8-217ENST00000576353 SMIM20Q8N5G0 67 aa10.56□□□□□ -0.72
SNF8-217ENST00000576353 CRIPTQ9P021 101 aa10.56□□□□□ -0.72
SNF8-217ENST00000576353 H0YAA0 97 aa10.55□□□□□ -0.72
SNF8-217ENST00000576353 Q5VV11 94 aa10.51□□□□□ -0.73
SNF8-217ENST00000576353 TRAV7A0A075B6U4 112 aa10.5□□□□□ -0.73
SNF8-217ENST00000576353 KRTAP19-8Q3LI54 63 aa10.5□□□□□ -0.73
SNF8-217ENST00000576353 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
SNF8-217ENST00000576353 KRTAP9-7A8MTY7 169 aa10.47□□□□□ -0.73
SNF8-217ENST00000576353 MT1BP07438 61 aa10.45□□□□□ -0.74
SNF8-217ENST00000576353 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
SNF8-217ENST00000576353 A6NN06 94 aa10.31□□□□□ -0.76
SNF8-217ENST00000576353 ACYP2P14621 99 aa10.31□□□□□ -0.76
SNF8-217ENST00000576353 MACF1Q9UPN3 7388 aaKnown RBP10.3□□□□□ -0.76
SNF8-217ENST00000576353 C20orf197Q8N268 126 aa10.27□□□□□ -0.77
SNF8-217ENST00000576353 SNURFQ9Y675 71 aa10.24□□□□□ -0.77
SNF8-217ENST00000576353 SERP2Q8N6R1 65 aa10.22□□□□□ -0.77
SNF8-217ENST00000576353 KRTAP10-5P60370 271 aa10.2□□□□□ -0.78
SNF8-217ENST00000576353 P0C880 135 aa10.19□□□□□ -0.78
SNF8-217ENST00000576353 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
SNF8-217ENST00000576353 SYNE2Q8WXH0 6885 aaKnown RBP10.19□□□□□ -0.78
SNF8-217ENST00000576353 R4GN34 69 aa10.17□□□□□ -0.78
SNF8-217ENST00000576353 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
SNF8-217ENST00000576353 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
SNF8-217ENST00000576353 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
SNF8-217ENST00000576353 M0QZ58 72 aa10.08□□□□□ -0.8
SNF8-217ENST00000576353 KRTAP6-3Q3LI67 103 aa10.06□□□□□ -0.8
SNF8-217ENST00000576353 PLAC4Q8WY50 150 aa10.03□□□□□ -0.8
SNF8-217ENST00000576353 PRO2289Q9P1D8 64 aa9.95□□□□□ -0.82
SNF8-217ENST00000576353 COX7CP15954 63 aa9.94□□□□□ -0.82
SNF8-217ENST00000576353 LINC01554Q52M75 96 aa9.92□□□□□ -0.82
SNF8-217ENST00000576353 MT1XP80297 61 aa9.85□□□□□ -0.83
SNF8-217ENST00000576353 COA5Q86WW8 74 aa9.81□□□□□ -0.84
SNF8-217ENST00000576353 H7BZZ5 65 aa9.73□□□□□ -0.85
SNF8-217ENST00000576353 ANAPC13Q9BS18 74 aa9.69□□□□□ -0.86
SNF8-217ENST00000576353 CYSTM1Q9H1C7 97 aa9.69□□□□□ -0.86
SNF8-217ENST00000576353 KRTAP5-9P26371 169 aa9.66□□□□□ -0.86
SNF8-217ENST00000576353 SEC61GP60059 68 aa9.63□□□□□ -0.87
SNF8-217ENST00000576353 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
SNF8-217ENST00000576353 SERP1Q9Y6X1 66 aa9.6□□□□□ -0.87
SNF8-217ENST00000576353 KRTAP13-4Q3LI77 160 aa9.57□□□□□ -0.88
SNF8-217ENST00000576353 NEBP20929 6669 aa9.55□□□□□ -0.88
SNF8-217ENST00000576353 MUC12Q9UKN1 5478 aa9.49□□□□□ -0.89
SNF8-217ENST00000576353 KRTAP8-1Q8IUC2 63 aa9.47□□□□□ -0.89
SNF8-217ENST00000576353 KMT2DO14686 5537 aa9.45□□□□□ -0.9
SNF8-217ENST00000576353 CCDC179H3BU77 68 aa9.45□□□□□ -0.9
SNF8-217ENST00000576353 SPRR2FQ96RM1 72 aa9.43□□□□□ -0.9
SNF8-217ENST00000576353 A0A1B0GU33 70 aa9.41□□□□□ -0.9
SNF8-217ENST00000576353 KRTAP10-7P60409 375 aaPredicted RBP9.4□□□□□ -0.9
SNF8-217ENST00000576353 CAMK2N1Q7Z7J9 78 aa9.39□□□□□ -0.91
SNF8-217ENST00000576353 KRTAP10-12P60413 245 aa9.38□□□□□ -0.91
SNF8-217ENST00000576353 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
SNF8-217ENST00000576353 KRTAP4-8Q9BYQ9 185 aa9.36□□□□□ -0.91
SNF8-217ENST00000576353 A0A0D9SG42 100 aa9.34□□□□□ -0.91
SNF8-217ENST00000576353 ATP5EP56381 51 aaPredicted RBP9.34□□□□□ -0.91
SNF8-217ENST00000576353 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
SNF8-217ENST00000576353 A0A1B0GU69 56 aa9.33□□□□□ -0.92
SNF8-217ENST00000576353 MDN1Q9NU22 5596 aa9.3□□□□□ -0.92
SNF8-217ENST00000576353 SPRR2EP22531 72 aa9.24□□□□□ -0.93
SNF8-217ENST00000576353 SPRR2BP35325 72 aa9.24□□□□□ -0.93
SNF8-217ENST00000576353 SPRR2AP35326 72 aa9.24□□□□□ -0.93
SNF8-217ENST00000576353 KRTAP20-1Q3LI63 56 aa9.22□□□□□ -0.93
SNF8-217ENST00000576353 SPINT4Q6UDR6 99 aa9.21□□□□□ -0.94
SNF8-217ENST00000576353 SMIM26A0A096LP01 95 aa9.17□□□□□ -0.94
SNF8-217ENST00000576353 TMEM258P61165 79 aa9.15□□□□□ -0.94
SNF8-217ENST00000576353 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
SNF8-217ENST00000576353 LCE1AQ5T7P2 110 aa9.14□□□□□ -0.95
SNF8-217ENST00000576353 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
SNF8-217ENST00000576353 KRTAP2-3P0C7H8 128 aa9.05□□□□□ -0.96
SNF8-217ENST00000576353 KRTAP2-4Q9BYR9 128 aa9.05□□□□□ -0.96
SNF8-217ENST00000576353 LINC01558Q9Y6Z2 57 aa9.05□□□□□ -0.96
SNF8-217ENST00000576353 A8MU10 97 aa9.03□□□□□ -0.96
SNF8-217ENST00000576353 SPRR2DP22532 72 aa8.94□□□□□ -0.98
SNF8-217ENST00000576353 UQCR11O14957 56 aa8.82□□□□□ -1
SNF8-217ENST00000576353 KRTAP19-7Q3SYF9 63 aa8.8□□□□□ -1
SNF8-217ENST00000576353 KRTAP2-2Q9BYT5 123 aa8.78□□□□□ -1
SNF8-217ENST00000576353 KRTAP2-1Q9BYU5 128 aa8.78□□□□□ -1
SNF8-217ENST00000576353 MT1EP04732 61 aa8.73□□□□□ -1.01
SNF8-217ENST00000576353 C10orf95Q9H7T3 257 aa8.72□□□□□ -1.01
SNF8-217ENST00000576353 TNP1P09430 55 aa8.71□□□□□ -1.02
SNF8-217ENST00000576353 LCE3BQ5TA77 95 aa8.67□□□□□ -1.02
SNF8-217ENST00000576353 V9GYY9 64 aa8.67□□□□□ -1.02
SNF8-217ENST00000576353 KRTAP19-5Q3LI72 72 aa8.64□□□□□ -1.03
SNF8-217ENST00000576353 MIR22HGQ0VDD5 57 aa8.62□□□□□ -1.03
SNF8-217ENST00000576353 LCE5AQ5TCM9 118 aa8.62□□□□□ -1.03
SNF8-217ENST00000576353 KRTAP19-3Q7Z4W3 81 aa8.62□□□□□ -1.03
SNF8-217ENST00000576353 Q1T7F1 81 aa8.58□□□□□ -1.04
SNF8-217ENST00000576353 PSPHP1O15172 72 aa8.55□□□□□ -1.04
SNF8-217ENST00000576353 LCE3AQ5TA76 89 aa8.54□□□□□ -1.04
SNF8-217ENST00000576353 K7ERS5 55 aa8.47□□□□□ -1.05
SNF8-217ENST00000576353 MT1GP13640 62 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms