RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
TRAPPC1-207ENST00000575639 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
TRAPPC1-207ENST00000575639 H3BPC8 53 aa7.08□□□□□ -1.28
TRAPPC1-207ENST00000575639 LCA10Q71F78 164 aa7.07□□□□□ -1.28
TRAPPC1-207ENST00000575639 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
TRAPPC1-207ENST00000575639 LCE2BO14633 110 aa7.05□□□□□ -1.28
TRAPPC1-207ENST00000575639 A8MUN3 132 aa7.03□□□□□ -1.28
TRAPPC1-207ENST00000575639 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
TRAPPC1-207ENST00000575639 SMIM20Q8N5G0 67 aa7.03□□□□□ -1.28
TRAPPC1-207ENST00000575639 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
TRAPPC1-207ENST00000575639 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
TRAPPC1-207ENST00000575639 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
TRAPPC1-207ENST00000575639 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
TRAPPC1-207ENST00000575639 NDUFC1O43677 76 aa6.96□□□□□ -1.3
TRAPPC1-207ENST00000575639 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
TRAPPC1-207ENST00000575639 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
TRAPPC1-207ENST00000575639 NEBP20929 6669 aa6.84□□□□□ -1.31
TRAPPC1-207ENST00000575639 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
TRAPPC1-207ENST00000575639 H0YAA0 97 aa6.81□□□□□ -1.32
TRAPPC1-207ENST00000575639 ACYP2P14621 99 aa6.79□□□□□ -1.32
TRAPPC1-207ENST00000575639 SNURFQ9Y675 71 aa6.79□□□□□ -1.32
TRAPPC1-207ENST00000575639 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
TRAPPC1-207ENST00000575639 C20orf197Q8N268 126 aa6.76□□□□□ -1.33
TRAPPC1-207ENST00000575639 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
TRAPPC1-207ENST00000575639 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
TRAPPC1-207ENST00000575639 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
TRAPPC1-207ENST00000575639 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
TRAPPC1-207ENST00000575639 Q5VV11 94 aa6.7□□□□□ -1.34
TRAPPC1-207ENST00000575639 SPTSSBQ8NFR3 76 aa6.7□□□□□ -1.34
TRAPPC1-207ENST00000575639 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
TRAPPC1-207ENST00000575639 CHKB-CPT1BH3BT56 60 aa6.68□□□□□ -1.34
TRAPPC1-207ENST00000575639 KRTAP19-8Q3LI54 63 aa6.67□□□□□ -1.34
TRAPPC1-207ENST00000575639 COX7CP15954 63 aa6.65□□□□□ -1.34
TRAPPC1-207ENST00000575639 MT1BP07438 61 aa6.62□□□□□ -1.35
TRAPPC1-207ENST00000575639 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
TRAPPC1-207ENST00000575639 P0C880 135 aa6.58□□□□□ -1.36
TRAPPC1-207ENST00000575639 R4GN34 69 aa6.58□□□□□ -1.36
TRAPPC1-207ENST00000575639 ANAPC13Q9BS18 74 aa6.54□□□□□ -1.36
TRAPPC1-207ENST00000575639 A6NN06 94 aa6.53□□□□□ -1.36
TRAPPC1-207ENST00000575639 M0QZ58 72 aa6.52□□□□□ -1.37
TRAPPC1-207ENST00000575639 H7BZZ5 65 aa6.48□□□□□ -1.37
TRAPPC1-207ENST00000575639 COA5Q86WW8 74 aa6.48□□□□□ -1.37
TRAPPC1-207ENST00000575639 PLAC4Q8WY50 150 aa6.46□□□□□ -1.38
TRAPPC1-207ENST00000575639 KRTAP10-5P60370 271 aa6.45□□□□□ -1.38
TRAPPC1-207ENST00000575639 CYSTM1Q9H1C7 97 aa6.44□□□□□ -1.38
TRAPPC1-207ENST00000575639 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
TRAPPC1-207ENST00000575639 SEC61GP60059 68 aa6.37□□□□□ -1.39
TRAPPC1-207ENST00000575639 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
TRAPPC1-207ENST00000575639 CCDC179H3BU77 68 aa6.36□□□□□ -1.39
TRAPPC1-207ENST00000575639 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
TRAPPC1-207ENST00000575639 KMT2DO14686 5537 aa6.33□□□□□ -1.4
TRAPPC1-207ENST00000575639 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
TRAPPC1-207ENST00000575639 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
TRAPPC1-207ENST00000575639 MDN1Q9NU22 5596 aa6.28□□□□□ -1.4
TRAPPC1-207ENST00000575639 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC1-207ENST00000575639 MT1XP80297 61 aa6.27□□□□□ -1.41
TRAPPC1-207ENST00000575639 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
TRAPPC1-207ENST00000575639 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
TRAPPC1-207ENST00000575639 A0A1B0GU33 70 aa6.19□□□□□ -1.42
TRAPPC1-207ENST00000575639 TMEM258P61165 79 aa6.18□□□□□ -1.42
TRAPPC1-207ENST00000575639 A0A1B0GU69 56 aa6.17□□□□□ -1.42
TRAPPC1-207ENST00000575639 A0A0D9SG42 100 aa6.11□□□□□ -1.43
TRAPPC1-207ENST00000575639 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
TRAPPC1-207ENST00000575639 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
TRAPPC1-207ENST00000575639 KRTAP12-2P59991 146 aa6.1□□□□□ -1.43
TRAPPC1-207ENST00000575639 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
TRAPPC1-207ENST00000575639 PRR15LQ9BU68 103 aa6.09□□□□□ -1.43
TRAPPC1-207ENST00000575639 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
TRAPPC1-207ENST00000575639 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
TRAPPC1-207ENST00000575639 SMIM26A0A096LP01 95 aa6.04□□□□□ -1.44
TRAPPC1-207ENST00000575639 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
TRAPPC1-207ENST00000575639 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
TRAPPC1-207ENST00000575639 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
TRAPPC1-207ENST00000575639 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC1-207ENST00000575639 KRTAP10-12P60413 245 aa5.96□□□□□ -1.46
TRAPPC1-207ENST00000575639 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
TRAPPC1-207ENST00000575639 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
TRAPPC1-207ENST00000575639 SPRR2EP22531 72 aa5.92□□□□□ -1.46
TRAPPC1-207ENST00000575639 SPRR2BP35325 72 aa5.92□□□□□ -1.46
TRAPPC1-207ENST00000575639 SPRR2AP35326 72 aa5.92□□□□□ -1.46
TRAPPC1-207ENST00000575639 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
TRAPPC1-207ENST00000575639 A8MU10 97 aa5.91□□□□□ -1.46
TRAPPC1-207ENST00000575639 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
TRAPPC1-207ENST00000575639 UQCR11O14957 56 aa5.87□□□□□ -1.47
TRAPPC1-207ENST00000575639 V9GYY9 64 aa5.85□□□□□ -1.47
TRAPPC1-207ENST00000575639 PCP4P48539 62 aa5.78□□□□□ -1.48
TRAPPC1-207ENST00000575639 Q1T7F1 81 aa5.77□□□□□ -1.49
TRAPPC1-207ENST00000575639 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
TRAPPC1-207ENST00000575639 PSPHP1O15172 72 aa5.74□□□□□ -1.49
TRAPPC1-207ENST00000575639 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
TRAPPC1-207ENST00000575639 SPRR2DP22532 72 aa5.73□□□□□ -1.49
TRAPPC1-207ENST00000575639 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
TRAPPC1-207ENST00000575639 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
TRAPPC1-207ENST00000575639 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
TRAPPC1-207ENST00000575639 TNP1P09430 55 aa5.67□□□□□ -1.5
TRAPPC1-207ENST00000575639 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
TRAPPC1-207ENST00000575639 K7ERS5 55 aa5.66□□□□□ -1.5
TRAPPC1-207ENST00000575639 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
TRAPPC1-207ENST00000575639 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
TRAPPC1-207ENST00000575639 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms