RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 LPAP08519 4548 aa12.19□□□□□ -0.46
NPLOC4-217ENST00000574897 UQCR11O14957 56 aa12.14□□□□□ -0.47
NPLOC4-217ENST00000574897 SEC61GP60059 68 aa12.12□□□□□ -0.47
NPLOC4-217ENST00000574897 SPATA8Q6RVD6 105 aa12.11□□□□□ -0.47
NPLOC4-217ENST00000574897 MIR22HGQ0VDD5 57 aa12.11□□□□□ -0.47
NPLOC4-217ENST00000574897 TPRXLQ17RH7 258 aa12.1□□□□□ -0.47
NPLOC4-217ENST00000574897 A6NN06 94 aa12.08□□□□□ -0.48
NPLOC4-217ENST00000574897 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
NPLOC4-217ENST00000574897 HERC2O95714 4834 aa11.95□□□□□ -0.5
NPLOC4-217ENST00000574897 H0YAA0 97 aa11.92□□□□□ -0.5
NPLOC4-217ENST00000574897 S4R3F8 94 aa11.91□□□□□ -0.5
NPLOC4-217ENST00000574897 A0A1B0GU33 70 aa11.9□□□□□ -0.5
NPLOC4-217ENST00000574897 H1FX-AS1Q4G0G2 97 aa11.88□□□□□ -0.51
NPLOC4-217ENST00000574897 J3QL48 77 aa11.85□□□□□ -0.51
NPLOC4-217ENST00000574897 KTN1-AS1Q86SY8 53 aa11.84□□□□□ -0.51
NPLOC4-217ENST00000574897 BIRC6Q9NR09 4857 aa11.81□□□□□ -0.52
NPLOC4-217ENST00000574897 KRTAP10-6P60371 365 aaPredicted RBP11.77□□□□□ -0.52
NPLOC4-217ENST00000574897 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
NPLOC4-217ENST00000574897 RBM12B-AS1Q9P1G2 102 aa11.72□□□□□ -0.53
NPLOC4-217ENST00000574897 MUC17Q685J3 4493 aa11.68□□□□□ -0.54
NPLOC4-217ENST00000574897 KRTAP4-1Q9BYQ7 146 aa11.64□□□□□ -0.55
NPLOC4-217ENST00000574897 P0C880 135 aa11.64□□□□□ -0.55
NPLOC4-217ENST00000574897 ADM2Q7Z4H4 148 aa11.63□□□□□ -0.55
NPLOC4-217ENST00000574897 SEC61BP60468 96 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-217ENST00000574897 KRTAP13-4Q3LI77 160 aa11.63□□□□□ -0.55
NPLOC4-217ENST00000574897 PRAC1Q96KF2 57 aa11.57□□□□□ -0.56
NPLOC4-217ENST00000574897 CSAG1Q6PB30 78 aa11.52□□□□□ -0.57
NPLOC4-217ENST00000574897 PCLOQ9Y6V0 5065 aa11.48□□□□□ -0.57
NPLOC4-217ENST00000574897 A0A0D9SG42 100 aa11.47□□□□□ -0.57
NPLOC4-217ENST00000574897 HERC1Q15751 4861 aa11.43□□□□□ -0.58
NPLOC4-217ENST00000574897 MUC2Q02817 5179 aa11.38□□□□□ -0.59
NPLOC4-217ENST00000574897 KRTAP19-2Q3LHN2 52 aa11.34□□□□□ -0.59
NPLOC4-217ENST00000574897 K7ERS5 55 aa11.31□□□□□ -0.6
NPLOC4-217ENST00000574897 HMCN2Q8NDA2 5059 aa11.25□□□□□ -0.61
NPLOC4-217ENST00000574897 KRTAP12-2P59991 146 aa11.19□□□□□ -0.62
NPLOC4-217ENST00000574897 M0QZ58 72 aa11.13□□□□□ -0.63
NPLOC4-217ENST00000574897 LORP23490 312 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-217ENST00000574897 KRTAP12-1P59990 96 aa11.12□□□□□ -0.63
NPLOC4-217ENST00000574897 SPINT4Q6UDR6 99 aa11.1□□□□□ -0.63
NPLOC4-217ENST00000574897 CRIPTQ9P021 101 aa11.09□□□□□ -0.63
NPLOC4-217ENST00000574897 FLGP20930 4061 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-217ENST00000574897 ROMO1P60602 79 aa11.04□□□□□ -0.64
NPLOC4-217ENST00000574897 LINC01554Q52M75 96 aa11.03□□□□□ -0.64
NPLOC4-217ENST00000574897 R4GN34 69 aa11.03□□□□□ -0.64
NPLOC4-217ENST00000574897 KRTAP25-1Q3LHN0 102 aa10.96□□□□□ -0.66
NPLOC4-217ENST00000574897 FAT4Q6V0I7 4981 aa10.86□□□□□ -0.67
NPLOC4-217ENST00000574897 LCE2CQ5TA81 110 aa10.83□□□□□ -0.68
NPLOC4-217ENST00000574897 UBR4Q5T4S7 5183 aa10.81□□□□□ -0.68
NPLOC4-217ENST00000574897 RNF213Q63HN8 5207 aa10.78□□□□□ -0.68
NPLOC4-217ENST00000574897 C10orf95Q9H7T3 257 aa10.76□□□□□ -0.69
NPLOC4-217ENST00000574897 MT1HP80294 61 aa10.55□□□□□ -0.72
NPLOC4-217ENST00000574897 M0R2T5 61 aa10.52□□□□□ -0.73
NPLOC4-217ENST00000574897 CAMK2N1Q7Z7J9 78 aa10.41□□□□□ -0.74
NPLOC4-217ENST00000574897 KRTAP19-1Q8IUB9 90 aa10.31□□□□□ -0.76
NPLOC4-217ENST00000574897 MT1FP04733 61 aa10.29□□□□□ -0.76
NPLOC4-217ENST00000574897 MT2AP02795 61 aa10.29□□□□□ -0.76
NPLOC4-217ENST00000574897 SPRR2GQ9BYE4 73 aa10.28□□□□□ -0.76
NPLOC4-217ENST00000574897 KRTAP9-8Q9BYQ0 159 aa10.25□□□□□ -0.77
NPLOC4-217ENST00000574897 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
NPLOC4-217ENST00000574897 PLAC4Q8WY50 150 aa10.06□□□□□ -0.8
NPLOC4-217ENST00000574897 TNP1P09430 55 aa9.94□□□□□ -0.82
NPLOC4-217ENST00000574897 KRTAP19-8Q3LI54 63 aa9.89□□□□□ -0.83
NPLOC4-217ENST00000574897 KRTAP15-1Q3LI76 137 aa9.89□□□□□ -0.83
NPLOC4-217ENST00000574897 PP632Q6XCG6 107 aa9.86□□□□□ -0.83
NPLOC4-217ENST00000574897 MT1BP07438 61 aa9.85□□□□□ -0.83
NPLOC4-217ENST00000574897 KRTAP9-3Q9BYQ3 159 aa9.83□□□□□ -0.84
NPLOC4-217ENST00000574897 KRTAP10-5P60370 271 aa9.66□□□□□ -0.86
NPLOC4-217ENST00000574897 MT1XP80297 61 aa9.66□□□□□ -0.86
NPLOC4-217ENST00000574897 LCE2AQ5TA79 106 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-217ENST00000574897 KRTAP23-1A1A580 65 aa9.63□□□□□ -0.87
NPLOC4-217ENST00000574897 LCE3AQ5TA76 89 aa9.57□□□□□ -0.88
NPLOC4-217ENST00000574897 LCE2BO14633 110 aa9.55□□□□□ -0.88
NPLOC4-217ENST00000574897 NDUFAF8A1L188 74 aa9.48□□□□□ -0.89
NPLOC4-217ENST00000574897 USH2AO75445 5202 aa9.43□□□□□ -0.9
NPLOC4-217ENST00000574897 KRTAP10-7P60409 375 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-217ENST00000574897 H3BS24 57 aa9.32□□□□□ -0.92
NPLOC4-217ENST00000574897 KRTAP10-12P60413 245 aa9.3□□□□□ -0.92
NPLOC4-217ENST00000574897 PRO2289Q9P1D8 64 aa9.27□□□□□ -0.93
NPLOC4-217ENST00000574897 KRTAP8-1Q8IUC2 63 aa9.26□□□□□ -0.93
NPLOC4-217ENST00000574897 SPRR5A0A1B0GTR4 108 aa9.1□□□□□ -0.95
NPLOC4-217ENST00000574897 KRTAP12-3P60328 96 aa9.08□□□□□ -0.96
NPLOC4-217ENST00000574897 KMT2DO14686 5537 aa9.06□□□□□ -0.96
NPLOC4-217ENST00000574897 LUZP6Q538Z0 58 aa9.05□□□□□ -0.96
NPLOC4-217ENST00000574897 KRTAP4-8A0A0G2JLE6 195 aa8.94□□□□□ -0.98
NPLOC4-217ENST00000574897 KRTAP4-8Q9BYQ9 185 aa8.94□□□□□ -0.98
NPLOC4-217ENST00000574897 KRTAP19-5Q3LI72 72 aa8.9□□□□□ -0.98
NPLOC4-217ENST00000574897 SSPOA2VEC9 5147 aa8.89□□□□□ -0.99
NPLOC4-217ENST00000574897 FSIP2Q5CZC0 6907 aa8.83□□□□□ -1
NPLOC4-217ENST00000574897 KRTAP19-6Q3LI70 58 aa8.64□□□□□ -1.03
NPLOC4-217ENST00000574897 KRTAP19-7Q3SYF9 63 aa8.62□□□□□ -1.03
NPLOC4-217ENST00000574897 LCE3CQ5T5A8 94 aa8.52□□□□□ -1.05
NPLOC4-217ENST00000574897 LCE2DQ5TA82 110 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-217ENST00000574897 MT1EP04732 61 aa8.39□□□□□ -1.07
NPLOC4-217ENST00000574897 KRTAP4-7Q9BYR0 210 aa8.38□□□□□ -1.07
NPLOC4-217ENST00000574897 FCGBPQ9Y6R7 5405 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-217ENST00000574897 MT1LQ93083 61 aa8.32□□□□□ -1.08
NPLOC4-217ENST00000574897 KRTAP9-6A8MVA2 160 aa8.26□□□□□ -1.09
NPLOC4-217ENST00000574897 A0A0A0MQY5 61 aa8.24□□□□□ -1.09
NPLOC4-217ENST00000574897 MUC12Q9UKN1 5478 aa8.12□□□□□ -1.11
NPLOC4-217ENST00000574897 KRTAP19-4Q3LI73 84 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms