RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 Q5VV11 94 aa7.75□□□□□ -1.17
SMG6-214ENST00000573827 ATP5EP2Q5VTU8 51 aa7.72□□□□□ -1.17
SMG6-214ENST00000573827 A6NN06 94 aa7.7□□□□□ -1.18
SMG6-214ENST00000573827 KRTAP10-5P60370 271 aa7.68□□□□□ -1.18
SMG6-214ENST00000573827 UQCRQO14949 82 aa7.67□□□□□ -1.18
SMG6-214ENST00000573827 HIST1H4AP62805 103 aaKnown RBP7.65□□□□□ -1.18
SMG6-214ENST00000573827 H0Y9P7 68 aa7.64□□□□□ -1.19
SMG6-214ENST00000573827 ATOX1O00244 68 aa7.62□□□□□ -1.19
SMG6-214ENST00000573827 CRIPTQ9P021 101 aa7.62□□□□□ -1.19
SMG6-214ENST00000573827 KMT2DO14686 5537 aa7.6□□□□□ -1.19
SMG6-214ENST00000573827 H0YAA0 97 aa7.59□□□□□ -1.19
SMG6-214ENST00000573827 LINC00643Q86TS7 51 aa7.59□□□□□ -1.19
SMG6-214ENST00000573827 MDN1Q9NU22 5596 aa7.58□□□□□ -1.2
SMG6-214ENST00000573827 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
SMG6-214ENST00000573827 A0A1B0GV90 55 aa7.56□□□□□ -1.2
SMG6-214ENST00000573827 OCR1Q9BZK8 76 aa7.55□□□□□ -1.2
SMG6-214ENST00000573827 NDUFC1O43677 76 aa7.54□□□□□ -1.2
SMG6-214ENST00000573827 A8MUN3 132 aa7.53□□□□□ -1.2
SMG6-214ENST00000573827 LINC00208Q96KT6 92 aa7.51□□□□□ -1.21
SMG6-214ENST00000573827 KRTAP5-9P26371 169 aa7.48□□□□□ -1.21
SMG6-214ENST00000573827 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
SMG6-214ENST00000573827 MP68P56378 58 aa7.42□□□□□ -1.22
SMG6-214ENST00000573827 MT1XP80297 61 aa7.37□□□□□ -1.23
SMG6-214ENST00000573827 H3BPC8 53 aa7.34□□□□□ -1.23
SMG6-214ENST00000573827 P0C880 135 aa7.34□□□□□ -1.23
SMG6-214ENST00000573827 DMAC1Q96GE9 116 aa7.34□□□□□ -1.23
SMG6-214ENST00000573827 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
SMG6-214ENST00000573827 J3QR89 54 aa7.25□□□□□ -1.25
SMG6-214ENST00000573827 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
SMG6-214ENST00000573827 R4GN34 69 aa7.23□□□□□ -1.25
SMG6-214ENST00000573827 KRTAP20-1Q3LI63 56 aa7.22□□□□□ -1.25
SMG6-214ENST00000573827 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
SMG6-214ENST00000573827 SCGB1A1P11684 91 aa7.2□□□□□ -1.26
SMG6-214ENST00000573827 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
SMG6-214ENST00000573827 M0QZ58 72 aa7.19□□□□□ -1.26
SMG6-214ENST00000573827 KRTAP12-2P59991 146 aa7.18□□□□□ -1.26
SMG6-214ENST00000573827 SPRR2FQ96RM1 72 aa7.15□□□□□ -1.26
SMG6-214ENST00000573827 TRAV7A0A075B6U4 112 aa7.14□□□□□ -1.27
SMG6-214ENST00000573827 K7ERU9 68 aa7.13□□□□□ -1.27
SMG6-214ENST00000573827 MT-ATP8P03928 68 aa7.12□□□□□ -1.27
SMG6-214ENST00000573827 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
SMG6-214ENST00000573827 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
SMG6-214ENST00000573827 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
SMG6-214ENST00000573827 ACYP2P14621 99 aa7.06□□□□□ -1.28
SMG6-214ENST00000573827 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
SMG6-214ENST00000573827 SPRR2EP22531 72 aa7.05□□□□□ -1.28
SMG6-214ENST00000573827 SPRR2BP35325 72 aa7.05□□□□□ -1.28
SMG6-214ENST00000573827 SPRR2AP35326 72 aa7.05□□□□□ -1.28
SMG6-214ENST00000573827 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
SMG6-214ENST00000573827 LCE1AQ5T7P2 110 aa7.03□□□□□ -1.28
SMG6-214ENST00000573827 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
SMG6-214ENST00000573827 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
SMG6-214ENST00000573827 KRTAP10-7P60409 375 aaPredicted RBP7.01□□□□□ -1.29
SMG6-214ENST00000573827 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
SMG6-214ENST00000573827 SPTSSBQ8NFR3 76 aa6.94□□□□□ -1.3
SMG6-214ENST00000573827 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
SMG6-214ENST00000573827 CHKB-CPT1BH3BT56 60 aa6.88□□□□□ -1.31
SMG6-214ENST00000573827 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
SMG6-214ENST00000573827 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
SMG6-214ENST00000573827 SPRR2DP22532 72 aa6.81□□□□□ -1.32
SMG6-214ENST00000573827 SERP2Q8N6R1 65 aa6.8□□□□□ -1.32
SMG6-214ENST00000573827 KRTAP2-2Q9BYT5 123 aa6.8□□□□□ -1.32
SMG6-214ENST00000573827 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
SMG6-214ENST00000573827 PCP4P48539 62 aa6.71□□□□□ -1.34
SMG6-214ENST00000573827 COA5Q86WW8 74 aa6.68□□□□□ -1.34
SMG6-214ENST00000573827 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
SMG6-214ENST00000573827 KRTAP19-7Q3SYF9 63 aa6.61□□□□□ -1.35
SMG6-214ENST00000573827 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
SMG6-214ENST00000573827 CYSTM1Q9H1C7 97 aa6.58□□□□□ -1.36
SMG6-214ENST00000573827 COX7CP15954 63 aa6.56□□□□□ -1.36
SMG6-214ENST00000573827 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
SMG6-214ENST00000573827 DSTQ03001 7570 aaKnown RBP6.55□□□□□ -1.36
SMG6-214ENST00000573827 H7BZZ5 65 aa6.53□□□□□ -1.36
SMG6-214ENST00000573827 MT1EP04732 61 aa6.53□□□□□ -1.36
SMG6-214ENST00000573827 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
SMG6-214ENST00000573827 A0A0D9SG42 100 aa6.52□□□□□ -1.37
SMG6-214ENST00000573827 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
SMG6-214ENST00000573827 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
SMG6-214ENST00000573827 A0A1B0GU33 70 aa6.47□□□□□ -1.37
SMG6-214ENST00000573827 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
SMG6-214ENST00000573827 SEC61GP60059 68 aa6.47□□□□□ -1.37
SMG6-214ENST00000573827 KRTAP19-3Q7Z4W3 81 aa6.46□□□□□ -1.38
SMG6-214ENST00000573827 GPR98Q8WXG9 6306 aa6.43□□□□□ -1.38
SMG6-214ENST00000573827 SPINT4Q6UDR6 99 aa6.41□□□□□ -1.38
SMG6-214ENST00000573827 CCDC179H3BU77 68 aa6.38□□□□□ -1.39
SMG6-214ENST00000573827 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
SMG6-214ENST00000573827 A8MU10 97 aa6.29□□□□□ -1.4
SMG6-214ENST00000573827 MT1GP13640 62 aa6.28□□□□□ -1.4
SMG6-214ENST00000573827 A0A1B0GU69 56 aa6.27□□□□□ -1.41
SMG6-214ENST00000573827 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
SMG6-214ENST00000573827 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SMG6-214ENST00000573827 MT1LQ93083 61 aa6.22□□□□□ -1.41
SMG6-214ENST00000573827 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
SMG6-214ENST00000573827 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
SMG6-214ENST00000573827 MT1MQ8N339 61 aa6.21□□□□□ -1.42
SMG6-214ENST00000573827 TMEM258P61165 79 aa6.2□□□□□ -1.42
SMG6-214ENST00000573827 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
SMG6-214ENST00000573827 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
SMG6-214ENST00000573827 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
SMG6-214ENST00000573827 TNP1P09430 55 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms