RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 SNURFQ9Y675 71 aa4.81□□□□□ -1.64
NDE1-207ENST00000573203 TRAV22A0A0B4J277 110 aa4.8□□□□□ -1.64
NDE1-207ENST00000573203 ATP11AUNQ6ZP68 121 aa4.8□□□□□ -1.64
NDE1-207ENST00000573203 Q75L30 129 aa4.8□□□□□ -1.64
NDE1-207ENST00000573203 H0Y9P7 68 aa4.79□□□□□ -1.64
NDE1-207ENST00000573203 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
NDE1-207ENST00000573203 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
NDE1-207ENST00000573203 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
NDE1-207ENST00000573203 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
NDE1-207ENST00000573203 FAM236DA0A1B0GTK5 79 aa4.76□□□□□ -1.65
NDE1-207ENST00000573203 FAM236CP0DP71 79 aa4.76□□□□□ -1.65
NDE1-207ENST00000573203 SPANXA2-OT1Q8N9U9 137 aa4.76□□□□□ -1.65
NDE1-207ENST00000573203 C1orf64Q8NEQ6 169 aa4.76□□□□□ -1.65
NDE1-207ENST00000573203 NDUFS5O43920 106 aa4.75□□□□□ -1.65
NDE1-207ENST00000573203 MT1HP80294 61 aa4.75□□□□□ -1.65
NDE1-207ENST00000573203 C20orf166-AS1Q96NR2 134 aa4.75□□□□□ -1.65
NDE1-207ENST00000573203 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
NDE1-207ENST00000573203 A8MUU9 505 aa4.74□□□□□ -1.65
NDE1-207ENST00000573203 CYP4F30PQ9H0H9 118 aa4.72□□□□□ -1.65
NDE1-207ENST00000573203 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
NDE1-207ENST00000573203 M0R2T5 61 aa4.71□□□□□ -1.66
NDE1-207ENST00000573203 Q5W150 140 aa4.71□□□□□ -1.66
NDE1-207ENST00000573203 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
NDE1-207ENST00000573203 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
NDE1-207ENST00000573203 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
NDE1-207ENST00000573203 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
NDE1-207ENST00000573203 SMIM26A0A096LP01 95 aa4.62□□□□□ -1.67
NDE1-207ENST00000573203 RBM12B-AS1Q9P1G2 102 aa4.59□□□□□ -1.67
NDE1-207ENST00000573203 HRES1P13985 223 aa4.58□□□□□ -1.68
NDE1-207ENST00000573203 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
NDE1-207ENST00000573203 ACYP2P14621 99 aa4.56□□□□□ -1.68
NDE1-207ENST00000573203 MPLKIPQ8TAP9 179 aa4.56□□□□□ -1.68
NDE1-207ENST00000573203 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
NDE1-207ENST00000573203 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
NDE1-207ENST00000573203 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
NDE1-207ENST00000573203 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
NDE1-207ENST00000573203 A8MUN3 132 aa4.54□□□□□ -1.68
NDE1-207ENST00000573203 SPINK7P58062 85 aa4.54□□□□□ -1.68
NDE1-207ENST00000573203 Q1T7F1 81 aa4.53□□□□□ -1.68
NDE1-207ENST00000573203 COA5Q86WW8 74 aa4.53□□□□□ -1.68
NDE1-207ENST00000573203 V9GYY9 64 aa4.52□□□□□ -1.69
NDE1-207ENST00000573203 MT2AP02795 61 aa4.44□□□□□ -1.7
NDE1-207ENST00000573203 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
NDE1-207ENST00000573203 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
NDE1-207ENST00000573203 CHKB-CPT1BH3BT56 60 aa4.42□□□□□ -1.7
NDE1-207ENST00000573203 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
NDE1-207ENST00000573203 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
NDE1-207ENST00000573203 MT1FP04733 61 aa4.41□□□□□ -1.7
NDE1-207ENST00000573203 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.71
NDE1-207ENST00000573203 USH2AO75445 5202 aa4.39□□□□□ -1.71
NDE1-207ENST00000573203 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
NDE1-207ENST00000573203 Q5VV11 94 aa4.34□□□□□ -1.71
NDE1-207ENST00000573203 PSPHP1O15172 72 aa4.33□□□□□ -1.72
NDE1-207ENST00000573203 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
NDE1-207ENST00000573203 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
NDE1-207ENST00000573203 A0A1B0GU69 56 aa4.29□□□□□ -1.72
NDE1-207ENST00000573203 SEC61GP60059 68 aa4.27□□□□□ -1.73
NDE1-207ENST00000573203 PRO0628Q9UI54 55 aa4.26□□□□□ -1.73
NDE1-207ENST00000573203 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
NDE1-207ENST00000573203 S4R3F8 94 aa4.24□□□□□ -1.73
NDE1-207ENST00000573203 LCA10Q71F78 164 aa4.23□□□□□ -1.73
NDE1-207ENST00000573203 A6NED7 52 aa4.22□□□□□ -1.73
NDE1-207ENST00000573203 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
NDE1-207ENST00000573203 BRK1Q8WUW1 75 aa4.22□□□□□ -1.73
NDE1-207ENST00000573203 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
NDE1-207ENST00000573203 UQCR11O14957 56 aa4.21□□□□□ -1.74
NDE1-207ENST00000573203 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
NDE1-207ENST00000573203 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
NDE1-207ENST00000573203 H0YAA0 97 aa4.18□□□□□ -1.74
NDE1-207ENST00000573203 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
NDE1-207ENST00000573203 A0A1B0GU33 70 aa4.16□□□□□ -1.74
NDE1-207ENST00000573203 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
NDE1-207ENST00000573203 A8MU10 97 aa4.09□□□□□ -1.75
NDE1-207ENST00000573203 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
NDE1-207ENST00000573203 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
NDE1-207ENST00000573203 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
NDE1-207ENST00000573203 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
NDE1-207ENST00000573203 M0QZ58 72 aa4.05□□□□□ -1.76
NDE1-207ENST00000573203 MT1BP07438 61 aa4.05□□□□□ -1.76
NDE1-207ENST00000573203 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
NDE1-207ENST00000573203 P0C880 135 aa4.04□□□□□ -1.76
NDE1-207ENST00000573203 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
NDE1-207ENST00000573203 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
NDE1-207ENST00000573203 A6NN06 94 aa4.02□□□□□ -1.77
NDE1-207ENST00000573203 MT3P25713 68 aa4.01□□□□□ -1.77
NDE1-207ENST00000573203 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
NDE1-207ENST00000573203 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
NDE1-207ENST00000573203 K7ERS5 55 aa3.97□□□□□ -1.77
NDE1-207ENST00000573203 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
NDE1-207ENST00000573203 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
NDE1-207ENST00000573203 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
NDE1-207ENST00000573203 R4GN34 69 aa3.93□□□□□ -1.78
NDE1-207ENST00000573203 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
NDE1-207ENST00000573203 A0A0D9SG42 100 aa3.88□□□□□ -1.79
NDE1-207ENST00000573203 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
NDE1-207ENST00000573203 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
NDE1-207ENST00000573203 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
NDE1-207ENST00000573203 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
NDE1-207ENST00000573203 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
NDE1-207ENST00000573203 ROMO1P60602 79 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms