RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 H0YAA0 97 aa5.9□□□□□ -1.46
RPAIN-212ENST00000573126 Q5VSD8 79 aa5.9□□□□□ -1.47
RPAIN-212ENST00000573126 COX6B2Q6YFQ2 88 aa5.89□□□□□ -1.47
RPAIN-212ENST00000573126 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
RPAIN-212ENST00000573126 A0A1B0GU33 70 aa5.86□□□□□ -1.47
RPAIN-212ENST00000573126 RYR1P21817 5038 aa5.83□□□□□ -1.48
RPAIN-212ENST00000573126 H3BS24 57 aa5.83□□□□□ -1.48
RPAIN-212ENST00000573126 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
RPAIN-212ENST00000573126 KIAA1109Q2LD37 5005 aa5.82□□□□□ -1.48
RPAIN-212ENST00000573126 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
RPAIN-212ENST00000573126 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
RPAIN-212ENST00000573126 XP32Q5T750 250 aa5.81□□□□□ -1.48
RPAIN-212ENST00000573126 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
RPAIN-212ENST00000573126 CSAG1Q6PB30 78 aa5.77□□□□□ -1.49
RPAIN-212ENST00000573126 LPAP08519 4548 aa5.73□□□□□ -1.49
RPAIN-212ENST00000573126 MT1HL1P0DM35 61 aa5.72□□□□□ -1.49
RPAIN-212ENST00000573126 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
RPAIN-212ENST00000573126 S4R3F8 94 aa5.7□□□□□ -1.5
RPAIN-212ENST00000573126 BIRC6Q9NR09 4857 aa5.69□□□□□ -1.5
RPAIN-212ENST00000573126 LRP2P98164 4655 aa5.68□□□□□ -1.5
RPAIN-212ENST00000573126 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
RPAIN-212ENST00000573126 K7ERS5 55 aa5.65□□□□□ -1.5
RPAIN-212ENST00000573126 A0A0D9SG42 100 aa5.65□□□□□ -1.51
RPAIN-212ENST00000573126 ABCA13Q86UQ4 5058 aa5.63□□□□□ -1.51
RPAIN-212ENST00000573126 P0C880 135 aa5.63□□□□□ -1.51
RPAIN-212ENST00000573126 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
RPAIN-212ENST00000573126 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.52
RPAIN-212ENST00000573126 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
RPAIN-212ENST00000573126 HERC2O95714 4834 aa5.55□□□□□ -1.52
RPAIN-212ENST00000573126 KRTAP4-5Q9BYR2 181 aa5.54□□□□□ -1.52
RPAIN-212ENST00000573126 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
RPAIN-212ENST00000573126 ROMO1P60602 79 aa5.52□□□□□ -1.53
RPAIN-212ENST00000573126 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
RPAIN-212ENST00000573126 SPINT4Q6UDR6 99 aa5.45□□□□□ -1.54
RPAIN-212ENST00000573126 J3QL48 77 aa5.43□□□□□ -1.54
RPAIN-212ENST00000573126 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
RPAIN-212ENST00000573126 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
RPAIN-212ENST00000573126 M0QZ58 72 aa5.38□□□□□ -1.55
RPAIN-212ENST00000573126 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
RPAIN-212ENST00000573126 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.55
RPAIN-212ENST00000573126 MUC17Q685J3 4493 aa5.34□□□□□ -1.56
RPAIN-212ENST00000573126 MUC2Q02817 5179 aa5.33□□□□□ -1.56
RPAIN-212ENST00000573126 HERC1Q15751 4861 aa5.32□□□□□ -1.56
RPAIN-212ENST00000573126 R4GN34 69 aa5.32□□□□□ -1.56
RPAIN-212ENST00000573126 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
RPAIN-212ENST00000573126 LCE2BO14633 110 aa5.25□□□□□ -1.57
RPAIN-212ENST00000573126 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
RPAIN-212ENST00000573126 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
RPAIN-212ENST00000573126 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
RPAIN-212ENST00000573126 HMCN2Q8NDA2 5059 aa5.08□□□□□ -1.6
RPAIN-212ENST00000573126 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
RPAIN-212ENST00000573126 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
RPAIN-212ENST00000573126 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
RPAIN-212ENST00000573126 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
RPAIN-212ENST00000573126 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
RPAIN-212ENST00000573126 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
RPAIN-212ENST00000573126 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
RPAIN-212ENST00000573126 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
RPAIN-212ENST00000573126 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.62
RPAIN-212ENST00000573126 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.62
RPAIN-212ENST00000573126 PLAC4Q8WY50 150 aa4.9□□□□□ -1.63
RPAIN-212ENST00000573126 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
RPAIN-212ENST00000573126 M0R2T5 61 aa4.85□□□□□ -1.63
RPAIN-212ENST00000573126 TNP1P09430 55 aa4.82□□□□□ -1.64
RPAIN-212ENST00000573126 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
RPAIN-212ENST00000573126 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
RPAIN-212ENST00000573126 MT1HP80294 61 aa4.79□□□□□ -1.64
RPAIN-212ENST00000573126 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
RPAIN-212ENST00000573126 MT1FP04733 61 aa4.72□□□□□ -1.65
RPAIN-212ENST00000573126 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
RPAIN-212ENST00000573126 MT2AP02795 61 aa4.71□□□□□ -1.66
RPAIN-212ENST00000573126 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
RPAIN-212ENST00000573126 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
RPAIN-212ENST00000573126 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
RPAIN-212ENST00000573126 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
RPAIN-212ENST00000573126 MT1BP07438 61 aa4.54□□□□□ -1.68
RPAIN-212ENST00000573126 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
RPAIN-212ENST00000573126 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
RPAIN-212ENST00000573126 MT1XP80297 61 aa4.51□□□□□ -1.69
RPAIN-212ENST00000573126 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
RPAIN-212ENST00000573126 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
RPAIN-212ENST00000573126 USH2AO75445 5202 aa4.42□□□□□ -1.7
RPAIN-212ENST00000573126 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
RPAIN-212ENST00000573126 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
RPAIN-212ENST00000573126 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
RPAIN-212ENST00000573126 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
RPAIN-212ENST00000573126 KMT2DO14686 5537 aa4.31□□□□□ -1.72
RPAIN-212ENST00000573126 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
RPAIN-212ENST00000573126 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
RPAIN-212ENST00000573126 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
RPAIN-212ENST00000573126 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
RPAIN-212ENST00000573126 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
RPAIN-212ENST00000573126 INE1O15225 51 aa4.12□□□□□ -1.75
RPAIN-212ENST00000573126 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
RPAIN-212ENST00000573126 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
RPAIN-212ENST00000573126 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
RPAIN-212ENST00000573126 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
RPAIN-212ENST00000573126 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
RPAIN-212ENST00000573126 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
RPAIN-212ENST00000573126 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms