RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 F8W1H4 67 aa7.91□□□□□ -1.14
CHD3-214ENST00000572579 GTF2H5Q6ZYL4 71 aa7.88□□□□□ -1.15
CHD3-214ENST00000572579 KRTAP5-9P26371 169 aa7.86□□□□□ -1.15
CHD3-214ENST00000572579 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
CHD3-214ENST00000572579 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
CHD3-214ENST00000572579 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
CHD3-214ENST00000572579 IMUPQ9GZP8 106 aa7.76□□□□□ -1.17
CHD3-214ENST00000572579 H0YAA0 97 aa7.74□□□□□ -1.17
CHD3-214ENST00000572579 UQCRQO14949 82 aa7.73□□□□□ -1.17
CHD3-214ENST00000572579 H0Y9P7 68 aa7.72□□□□□ -1.17
CHD3-214ENST00000572579 KRTAP20-1Q3LI63 56 aa7.72□□□□□ -1.17
CHD3-214ENST00000572579 NDUFC1O43677 76 aa7.71□□□□□ -1.18
CHD3-214ENST00000572579 ACYP1P07311 99 aa7.7□□□□□ -1.18
CHD3-214ENST00000572579 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
CHD3-214ENST00000572579 FAM240AA0A1B0GVK7 77 aa7.68□□□□□ -1.18
CHD3-214ENST00000572579 ADM2Q7Z4H4 148 aa7.68□□□□□ -1.18
CHD3-214ENST00000572579 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
CHD3-214ENST00000572579 MT1XP80297 61 aa7.66□□□□□ -1.18
CHD3-214ENST00000572579 ATOX1O00244 68 aa7.65□□□□□ -1.18
CHD3-214ENST00000572579 A8MUN3 132 aa7.6□□□□□ -1.19
CHD3-214ENST00000572579 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
CHD3-214ENST00000572579 K7ERU9 68 aa7.58□□□□□ -1.2
CHD3-214ENST00000572579 OCR1Q9BZK8 76 aa7.56□□□□□ -1.2
CHD3-214ENST00000572579 P0C880 135 aa7.54□□□□□ -1.2
CHD3-214ENST00000572579 LINC00643Q86TS7 51 aa7.54□□□□□ -1.2
CHD3-214ENST00000572579 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
CHD3-214ENST00000572579 J3QR89 54 aa7.51□□□□□ -1.21
CHD3-214ENST00000572579 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
CHD3-214ENST00000572579 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
CHD3-214ENST00000572579 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
CHD3-214ENST00000572579 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
CHD3-214ENST00000572579 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
CHD3-214ENST00000572579 SPRR2EP22531 72 aa7.46□□□□□ -1.22
CHD3-214ENST00000572579 SPRR2BP35325 72 aa7.46□□□□□ -1.22
CHD3-214ENST00000572579 SPRR2AP35326 72 aa7.46□□□□□ -1.22
CHD3-214ENST00000572579 MP68P56378 58 aa7.45□□□□□ -1.22
CHD3-214ENST00000572579 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
CHD3-214ENST00000572579 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
CHD3-214ENST00000572579 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
CHD3-214ENST00000572579 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
CHD3-214ENST00000572579 R4GN34 69 aa7.42□□□□□ -1.22
CHD3-214ENST00000572579 LCE1AQ5T7P2 110 aa7.41□□□□□ -1.22
CHD3-214ENST00000572579 M0QZ58 72 aa7.39□□□□□ -1.23
CHD3-214ENST00000572579 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
CHD3-214ENST00000572579 H3BPC8 53 aa7.32□□□□□ -1.24
CHD3-214ENST00000572579 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
CHD3-214ENST00000572579 C20orf197Q8N268 126 aa7.31□□□□□ -1.24
CHD3-214ENST00000572579 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
CHD3-214ENST00000572579 SCGB1A1P11684 91 aa7.28□□□□□ -1.24
CHD3-214ENST00000572579 PCP4P48539 62 aa7.26□□□□□ -1.25
CHD3-214ENST00000572579 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
CHD3-214ENST00000572579 KRTAP2-2Q9BYT5 123 aa7.24□□□□□ -1.25
CHD3-214ENST00000572579 KRTAP2-1Q9BYU5 128 aa7.24□□□□□ -1.25
CHD3-214ENST00000572579 SPRR2DP22532 72 aa7.21□□□□□ -1.26
CHD3-214ENST00000572579 TRAV7A0A075B6U4 112 aa7.18□□□□□ -1.26
CHD3-214ENST00000572579 MT-ATP8P03928 68 aa7.16□□□□□ -1.26
CHD3-214ENST00000572579 ACYP2P14621 99 aa7.11□□□□□ -1.27
CHD3-214ENST00000572579 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
CHD3-214ENST00000572579 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
CHD3-214ENST00000572579 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
CHD3-214ENST00000572579 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
CHD3-214ENST00000572579 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
CHD3-214ENST00000572579 CHKB-CPT1BH3BT56 60 aa6.93□□□□□ -1.3
CHD3-214ENST00000572579 SMIM20Q8N5G0 67 aa6.92□□□□□ -1.3
CHD3-214ENST00000572579 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
CHD3-214ENST00000572579 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
CHD3-214ENST00000572579 GPR98Q8WXG9 6306 aa6.84□□□□□ -1.32
CHD3-214ENST00000572579 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
CHD3-214ENST00000572579 COX7CP15954 63 aa6.81□□□□□ -1.32
CHD3-214ENST00000572579 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
CHD3-214ENST00000572579 CCDC179H3BU77 68 aa6.8□□□□□ -1.32
CHD3-214ENST00000572579 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
CHD3-214ENST00000572579 MT1EP04732 61 aa6.78□□□□□ -1.32
CHD3-214ENST00000572579 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
CHD3-214ENST00000572579 KRTAP19-3Q7Z4W3 81 aa6.72□□□□□ -1.33
CHD3-214ENST00000572579 COA5Q86WW8 74 aa6.68□□□□□ -1.34
CHD3-214ENST00000572579 A0A0D9SG42 100 aa6.67□□□□□ -1.34
CHD3-214ENST00000572579 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
CHD3-214ENST00000572579 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
CHD3-214ENST00000572579 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
CHD3-214ENST00000572579 TMEM258P61165 79 aa6.59□□□□□ -1.35
CHD3-214ENST00000572579 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
CHD3-214ENST00000572579 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
CHD3-214ENST00000572579 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
CHD3-214ENST00000572579 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
CHD3-214ENST00000572579 A0A1B0GU33 70 aa6.53□□□□□ -1.36
CHD3-214ENST00000572579 MT1GP13640 62 aa6.53□□□□□ -1.36
CHD3-214ENST00000572579 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
CHD3-214ENST00000572579 SEC61GP60059 68 aa6.51□□□□□ -1.37
CHD3-214ENST00000572579 H7BZZ5 65 aa6.5□□□□□ -1.37
CHD3-214ENST00000572579 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.38
CHD3-214ENST00000572579 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
CHD3-214ENST00000572579 MT1MQ8N339 61 aa6.46□□□□□ -1.38
CHD3-214ENST00000572579 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.38
CHD3-214ENST00000572579 MT1LQ93083 61 aa6.45□□□□□ -1.38
CHD3-214ENST00000572579 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
CHD3-214ENST00000572579 A8MU10 97 aa6.38□□□□□ -1.39
CHD3-214ENST00000572579 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
CHD3-214ENST00000572579 MT4P47944 62 aa6.35□□□□□ -1.39
CHD3-214ENST00000572579 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms