RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 P0C880 135 aa5.74□□□□□ -1.49
PCDHGA4-201ENST00000571252 DNAH5Q8TE73 4624 aa5.71□□□□□ -1.49
PCDHGA4-201ENST00000571252 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
PCDHGA4-201ENST00000571252 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
PCDHGA4-201ENST00000571252 TNP1P09430 55 aa5.68□□□□□ -1.5
PCDHGA4-201ENST00000571252 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
PCDHGA4-201ENST00000571252 A0A1B0GVY2 172 aa5.68□□□□□ -1.5
PCDHGA4-201ENST00000571252 HYDINQ4G0P3 5121 aa5.66□□□□□ -1.5
PCDHGA4-201ENST00000571252 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
PCDHGA4-201ENST00000571252 FAT1Q14517 4588 aa5.63□□□□□ -1.51
PCDHGA4-201ENST00000571252 KRTAP10-8P60410 259 aa5.59□□□□□ -1.51
PCDHGA4-201ENST00000571252 PKHD1P08F94 4074 aa5.59□□□□□ -1.52
PCDHGA4-201ENST00000571252 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
PCDHGA4-201ENST00000571252 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
PCDHGA4-201ENST00000571252 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
PCDHGA4-201ENST00000571252 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
PCDHGA4-201ENST00000571252 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
PCDHGA4-201ENST00000571252 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
PCDHGA4-201ENST00000571252 PKD1P98161 4303 aa5.52□□□□□ -1.53
PCDHGA4-201ENST00000571252 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
PCDHGA4-201ENST00000571252 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
PCDHGA4-201ENST00000571252 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
PCDHGA4-201ENST00000571252 SACSQ9NZJ4 4579 aa5.47□□□□□ -1.53
PCDHGA4-201ENST00000571252 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
PCDHGA4-201ENST00000571252 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
PCDHGA4-201ENST00000571252 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
PCDHGA4-201ENST00000571252 MYCBP2O75592 4640 aa5.38□□□□□ -1.55
PCDHGA4-201ENST00000571252 KRTAP3-3Q9BYR6 98 aa5.36□□□□□ -1.55
PCDHGA4-201ENST00000571252 KRTAP3-2Q9BYR7 98 aa5.36□□□□□ -1.55
PCDHGA4-201ENST00000571252 KMT2CQ8NEZ4 4911 aaKnown RBP5.33□□□□□ -1.56
PCDHGA4-201ENST00000571252 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
PCDHGA4-201ENST00000571252 RYR2Q92736 4967 aa5.28□□□□□ -1.56
PCDHGA4-201ENST00000571252 KIAA1109Q2LD37 5005 aa5.27□□□□□ -1.57
PCDHGA4-201ENST00000571252 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
PCDHGA4-201ENST00000571252 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
PCDHGA4-201ENST00000571252 RYR3Q15413 4870 aa5.21□□□□□ -1.58
PCDHGA4-201ENST00000571252 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
PCDHGA4-201ENST00000571252 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
PCDHGA4-201ENST00000571252 RYR1P21817 5038 aa5.19□□□□□ -1.58
PCDHGA4-201ENST00000571252 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
PCDHGA4-201ENST00000571252 HSPG2P98160 4391 aa5.17□□□□□ -1.58
PCDHGA4-201ENST00000571252 LRP2P98164 4655 aa5.1□□□□□ -1.59
PCDHGA4-201ENST00000571252 TNXBP22105 4242 aa5.09□□□□□ -1.59
PCDHGA4-201ENST00000571252 LPAP08519 4548 aa4.99□□□□□ -1.61
PCDHGA4-201ENST00000571252 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.61
PCDHGA4-201ENST00000571252 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
PCDHGA4-201ENST00000571252 KRTAP4-1Q9BYQ7 146 aa4.94□□□□□ -1.62
PCDHGA4-201ENST00000571252 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
PCDHGA4-201ENST00000571252 HERC2O95714 4834 aa4.84□□□□□ -1.64
PCDHGA4-201ENST00000571252 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
PCDHGA4-201ENST00000571252 INE1O15225 51 aa4.75□□□□□ -1.65
PCDHGA4-201ENST00000571252 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
PCDHGA4-201ENST00000571252 MUC2Q02817 5179 aa4.7□□□□□ -1.66
PCDHGA4-201ENST00000571252 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
PCDHGA4-201ENST00000571252 BIRC6Q9NR09 4857 aa4.67□□□□□ -1.66
PCDHGA4-201ENST00000571252 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
PCDHGA4-201ENST00000571252 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
PCDHGA4-201ENST00000571252 MUC17Q685J3 4493 aa4.59□□□□□ -1.67
PCDHGA4-201ENST00000571252 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
PCDHGA4-201ENST00000571252 HERC1Q15751 4861 aa4.57□□□□□ -1.68
PCDHGA4-201ENST00000571252 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
PCDHGA4-201ENST00000571252 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
PCDHGA4-201ENST00000571252 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
PCDHGA4-201ENST00000571252 MT1HP80294 61 aa4.47□□□□□ -1.69
PCDHGA4-201ENST00000571252 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
PCDHGA4-201ENST00000571252 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
PCDHGA4-201ENST00000571252 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
PCDHGA4-201ENST00000571252 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
PCDHGA4-201ENST00000571252 MT2AP02795 61 aa4.42□□□□□ -1.7
PCDHGA4-201ENST00000571252 MT1FP04733 61 aa4.41□□□□□ -1.7
PCDHGA4-201ENST00000571252 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
PCDHGA4-201ENST00000571252 HMCN2Q8NDA2 5059 aa4.38□□□□□ -1.71
PCDHGA4-201ENST00000571252 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
PCDHGA4-201ENST00000571252 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
PCDHGA4-201ENST00000571252 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
PCDHGA4-201ENST00000571252 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
PCDHGA4-201ENST00000571252 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
PCDHGA4-201ENST00000571252 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
PCDHGA4-201ENST00000571252 MT1BP07438 61 aa4.19□□□□□ -1.74
PCDHGA4-201ENST00000571252 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
PCDHGA4-201ENST00000571252 MT1XP80297 61 aa4.17□□□□□ -1.74
PCDHGA4-201ENST00000571252 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
PCDHGA4-201ENST00000571252 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
PCDHGA4-201ENST00000571252 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
PCDHGA4-201ENST00000571252 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
PCDHGA4-201ENST00000571252 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
PCDHGA4-201ENST00000571252 LCE2BO14633 110 aa3.99□□□□□ -1.77
PCDHGA4-201ENST00000571252 USH2AO75445 5202 aa3.96□□□□□ -1.78
PCDHGA4-201ENST00000571252 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
PCDHGA4-201ENST00000571252 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
PCDHGA4-201ENST00000571252 SPRR2EP22531 72 aa3.93□□□□□ -1.78
PCDHGA4-201ENST00000571252 SPRR2BP35325 72 aa3.93□□□□□ -1.78
PCDHGA4-201ENST00000571252 SPRR2AP35326 72 aa3.93□□□□□ -1.78
PCDHGA4-201ENST00000571252 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.78
PCDHGA4-201ENST00000571252 KMT2DO14686 5537 aa3.87□□□□□ -1.79
PCDHGA4-201ENST00000571252 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
PCDHGA4-201ENST00000571252 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.8
PCDHGA4-201ENST00000571252 SPRR2DP22532 72 aa3.8□□□□□ -1.8
PCDHGA4-201ENST00000571252 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
PCDHGA4-201ENST00000571252 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms