RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ORMDL1Q9P0S3 153 aa2.04□□□□□ -2.08
NUP88-202ENST00000570937 LPAP08519 4548 aa2.03□□□□□ -2.08
NUP88-202ENST00000570937 K7ERJ3 54 aa2.03□□□□□ -2.08
NUP88-202ENST00000570937 CCKP06307 115 aa2.03□□□□□ -2.08
NUP88-202ENST00000570937 ASB16-AS1Q495Z4 193 aa2.03□□□□□ -2.08
NUP88-202ENST00000570937 ATP5EP2Q5VTU8 51 aa2.03□□□□□ -2.08
NUP88-202ENST00000570937 LCA10Q71F78 164 aa2.03□□□□□ -2.08
NUP88-202ENST00000570937 MUC2Q02817 5179 aa2.02□□□□□ -2.09
NUP88-202ENST00000570937 H7BZZ5 65 aa2.02□□□□□ -2.09
NUP88-202ENST00000570937 LST1O00453 97 aa2.02□□□□□ -2.09
NUP88-202ENST00000570937 Q1T7F1 81 aa2.02□□□□□ -2.09
NUP88-202ENST00000570937 A0A0G2JQZ4 141 aa2.01□□□□□ -2.09
NUP88-202ENST00000570937 TRBV7-4A0A0J9YYF1 115 aa2.01□□□□□ -2.09
NUP88-202ENST00000570937 C9orf92A6NGG3 77 aa2.01□□□□□ -2.09
NUP88-202ENST00000570937 RBM3P98179 157 aaKnown RBP2.01□□□□□ -2.09
NUP88-202ENST00000570937 ATP11AUNQ6ZP68 121 aa2.01□□□□□ -2.09
NUP88-202ENST00000570937 A0A087WSZ3 146 aa2□□□□□ -2.09
NUP88-202ENST00000570937 A8MUN3 132 aa2□□□□□ -2.09
NUP88-202ENST00000570937 JMJD7-PLA2G4BH0Y9G9 81 aa2□□□□□ -2.09
NUP88-202ENST00000570937 BAALC-AS2P0C853 105 aa2□□□□□ -2.09
NUP88-202ENST00000570937 PDE6GP18545 87 aa2□□□□□ -2.09
NUP88-202ENST00000570937 Q5W150 140 aa2□□□□□ -2.09
NUP88-202ENST00000570937 C7orf65Q6ZTY9 151 aa2□□□□□ -2.09
NUP88-202ENST00000570937 CYSTM1Q9H1C7 97 aa2□□□□□ -2.09
NUP88-202ENST00000570937 TRAV7A0A075B6U4 112 aa1.99□□□□□ -2.09
NUP88-202ENST00000570937 A0A1B0GW54 56 aa1.99□□□□□ -2.09
NUP88-202ENST00000570937 PSPHP1O15172 72 aa1.99□□□□□ -2.09
NUP88-202ENST00000570937 A0A1W2PNM2 257 aa1.98□□□□□ -2.09
NUP88-202ENST00000570937 MP68P56378 58 aa1.98□□□□□ -2.09
NUP88-202ENST00000570937 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
NUP88-202ENST00000570937 IGKV4-1P06312 121 aa1.97□□□□□ -2.09
NUP88-202ENST00000570937 RPL37P61927 97 aaKnown RBP1.97□□□□□ -2.09
NUP88-202ENST00000570937 PCOTHQ58A44 107 aa1.97□□□□□ -2.09
NUP88-202ENST00000570937 OBSCN-AS1Q96MR7 158 aa1.97□□□□□ -2.09
NUP88-202ENST00000570937 Q96NJ1 140 aa1.97□□□□□ -2.09
NUP88-202ENST00000570937 CYP4F30PQ9H0H9 118 aa1.97□□□□□ -2.09
NUP88-202ENST00000570937 LOC110117498A0A087WWA1 95 aa1.96□□□□□ -2.1
NUP88-202ENST00000570937 A6NN06 94 aa1.96□□□□□ -2.1
NUP88-202ENST00000570937 NDUFB1O75438 58 aa1.96□□□□□ -2.1
NUP88-202ENST00000570937 LINC00313P59037 77 aa1.96□□□□□ -2.1
NUP88-202ENST00000570937 C20orf197Q8N268 126 aa1.96□□□□□ -2.1
NUP88-202ENST00000570937 A0A1B0GVX0 72 aa1.95□□□□□ -2.1
NUP88-202ENST00000570937 LINC01554Q52M75 96 aa1.95□□□□□ -2.1
NUP88-202ENST00000570937 Q6ZQT0 140 aa1.95□□□□□ -2.1
NUP88-202ENST00000570937 LINC00472Q9H8W2 130 aa1.95□□□□□ -2.1
NUP88-202ENST00000570937 IGHV6-1A0A0B4J1U7 121 aa1.94□□□□□ -2.1
NUP88-202ENST00000570937 NREPQ16612 68 aa1.94□□□□□ -2.1
NUP88-202ENST00000570937 COX6B2Q6YFQ2 88 aa1.94□□□□□ -2.1
NUP88-202ENST00000570937 C20orf166-AS1Q96NR2 134 aa1.94□□□□□ -2.1
NUP88-202ENST00000570937 C14orf132Q9NPU4 83 aa1.94□□□□□ -2.1
NUP88-202ENST00000570937 A8MUU9 505 aa1.93□□□□□ -2.1
NUP88-202ENST00000570937 A8MWP4 228 aa1.93□□□□□ -2.1
NUP88-202ENST00000570937 MUC17Q685J3 4493 aa1.92□□□□□ -2.1
NUP88-202ENST00000570937 hDV103S1A0JD37 113 aa1.92□□□□□ -2.1
NUP88-202ENST00000570937 TRAV22A0A0B4J277 110 aa1.91□□□□□ -2.1
NUP88-202ENST00000570937 BPY2O14599 106 aa1.91□□□□□ -2.1
NUP88-202ENST00000570937 KRTAP4-1Q9BYQ7 146 aa1.91□□□□□ -2.1
NUP88-202ENST00000570937 CDC42SE1Q9NRR8 79 aa1.91□□□□□ -2.1
NUP88-202ENST00000570937 M0R2T5 61 aa1.9□□□□□ -2.11
NUP88-202ENST00000570937 UBL5Q9BZL1 73 aa1.9□□□□□ -2.11
NUP88-202ENST00000570937 IGKV3D-7A0A0C4DH55 119 aa1.89□□□□□ -2.11
NUP88-202ENST00000570937 LOC101927531A0A1B0GV80 90 aa1.89□□□□□ -2.11
NUP88-202ENST00000570937 HCG22E2RYF7 251 aa1.89□□□□□ -2.11
NUP88-202ENST00000570937 Q5VV11 94 aa1.89□□□□□ -2.11
NUP88-202ENST00000570937 TMEM254Q8TBM7 123 aa1.89□□□□□ -2.11
NUP88-202ENST00000570937 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
NUP88-202ENST00000570937 C8orf17Q9NRJ1 99 aa1.89□□□□□ -2.11
NUP88-202ENST00000570937 A0A087WVE0 104 aa1.88□□□□□ -2.11
NUP88-202ENST00000570937 MRPL34Q9BQ48 92 aaKnown RBP1.88□□□□□ -2.11
NUP88-202ENST00000570937 LINC00846Q9NV44 126 aa1.88□□□□□ -2.11
NUP88-202ENST00000570937 SPINK7P58062 85 aa1.87□□□□□ -2.11
NUP88-202ENST00000570937 MT1HP80294 61 aa1.87□□□□□ -2.11
NUP88-202ENST00000570937 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
NUP88-202ENST00000570937 K7EQZ3 153 aa1.86□□□□□ -2.11
NUP88-202ENST00000570937 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
NUP88-202ENST00000570937 SNURFQ9Y675 71 aa1.86□□□□□ -2.11
NUP88-202ENST00000570937 MMP24-AS1A0A0U1RRL7 71 aa1.85□□□□□ -2.11
NUP88-202ENST00000570937 CHKB-CPT1BH3BT56 60 aa1.85□□□□□ -2.11
NUP88-202ENST00000570937 WFDC13Q8IUB5 93 aa1.85□□□□□ -2.11
NUP88-202ENST00000570937 C1orf64Q8NEQ6 169 aa1.85□□□□□ -2.11
NUP88-202ENST00000570937 SPTSSBQ8NFR3 76 aa1.85□□□□□ -2.11
NUP88-202ENST00000570937 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
NUP88-202ENST00000570937 TP53AIP1Q9HCN2 124 aa1.84□□□□□ -2.11
NUP88-202ENST00000570937 A6NED7 52 aa1.83□□□□□ -2.12
NUP88-202ENST00000570937 HRES1P13985 223 aa1.83□□□□□ -2.12
NUP88-202ENST00000570937 H3BPC8 53 aa1.81□□□□□ -2.12
NUP88-202ENST00000570937 ROMO1P60602 79 aa1.81□□□□□ -2.12
NUP88-202ENST00000570937 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
NUP88-202ENST00000570937 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
NUP88-202ENST00000570937 H1FX-AS1Q4G0G2 97 aa1.8□□□□□ -2.12
NUP88-202ENST00000570937 PRR15LQ9BU68 103 aa1.8□□□□□ -2.12
NUP88-202ENST00000570937 LINC00208Q96KT6 92 aa1.79□□□□□ -2.12
NUP88-202ENST00000570937 FSIP2Q5CZC0 6907 aa1.77□□□□□ -2.13
NUP88-202ENST00000570937 K7ERS5 55 aa1.77□□□□□ -2.13
NUP88-202ENST00000570937 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
NUP88-202ENST00000570937 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
NUP88-202ENST00000570937 FLGP20930 4061 aaPredicted RBP1.76□□□□□ -2.13
NUP88-202ENST00000570937 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
NUP88-202ENST00000570937 H0Y9P7 68 aa1.75□□□□□ -2.13
NUP88-202ENST00000570937 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms