RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
TCF4-245ENST00000570177 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
TCF4-245ENST00000570177 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
TCF4-245ENST00000570177 SPINK1P00995 79 aa5.56□□□□□ -1.52
TCF4-245ENST00000570177 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
TCF4-245ENST00000570177 LINC00304Q8N9R0 145 aa5.56□□□□□ -1.52
TCF4-245ENST00000570177 Q8N1X5 172 aa5.55□□□□□ -1.52
TCF4-245ENST00000570177 C20orf166-AS1Q96NR2 134 aa5.55□□□□□ -1.52
TCF4-245ENST00000570177 A0A1B0GU69 56 aa5.54□□□□□ -1.52
TCF4-245ENST00000570177 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
TCF4-245ENST00000570177 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
TCF4-245ENST00000570177 C8orf17Q9NRJ1 99 aa5.54□□□□□ -1.52
TCF4-245ENST00000570177 TNXBP22105 4242 aa5.52□□□□□ -1.53
TCF4-245ENST00000570177 FLG2Q5D862 2391 aaPredicted RBP5.52□□□□□ -1.53
TCF4-245ENST00000570177 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
TCF4-245ENST00000570177 A8MUU9 505 aa5.51□□□□□ -1.53
TCF4-245ENST00000570177 KRTAP4-5Q9BYR2 181 aa5.51□□□□□ -1.53
TCF4-245ENST00000570177 ACYP2P14621 99 aa5.5□□□□□ -1.53
TCF4-245ENST00000570177 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
TCF4-245ENST00000570177 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
TCF4-245ENST00000570177 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
TCF4-245ENST00000570177 PCOTHQ58A44 107 aa5.49□□□□□ -1.53
TCF4-245ENST00000570177 K7ERS5 55 aa5.47□□□□□ -1.53
TCF4-245ENST00000570177 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
TCF4-245ENST00000570177 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
TCF4-245ENST00000570177 LUZP6Q538Z0 58 aa5.45□□□□□ -1.54
TCF4-245ENST00000570177 Q5W150 140 aa5.45□□□□□ -1.54
TCF4-245ENST00000570177 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
TCF4-245ENST00000570177 DMBT1Q9UGM3 2413 aaPredicted RBP5.43□□□□□ -1.54
TCF4-245ENST00000570177 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
TCF4-245ENST00000570177 KRTAP13-3Q3SY46 172 aa5.42□□□□□ -1.54
TCF4-245ENST00000570177 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
TCF4-245ENST00000570177 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
TCF4-245ENST00000570177 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
TCF4-245ENST00000570177 HERC2O95714 4834 aa5.38□□□□□ -1.55
TCF4-245ENST00000570177 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
TCF4-245ENST00000570177 C9orf92A6NGG3 77 aa5.33□□□□□ -1.56
TCF4-245ENST00000570177 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
TCF4-245ENST00000570177 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
TCF4-245ENST00000570177 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
TCF4-245ENST00000570177 IGKV2-30P06310 120 aa5.26□□□□□ -1.57
TCF4-245ENST00000570177 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
TCF4-245ENST00000570177 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
TCF4-245ENST00000570177 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
TCF4-245ENST00000570177 H0YAA0 97 aa5.17□□□□□ -1.58
TCF4-245ENST00000570177 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
TCF4-245ENST00000570177 LPAP08519 4548 aa5.14□□□□□ -1.59
TCF4-245ENST00000570177 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
TCF4-245ENST00000570177 LRP2P98164 4655 aa5.14□□□□□ -1.59
TCF4-245ENST00000570177 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
TCF4-245ENST00000570177 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
TCF4-245ENST00000570177 A0A1B0GU33 70 aa5.05□□□□□ -1.6
TCF4-245ENST00000570177 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
TCF4-245ENST00000570177 HERC1Q15751 4861 aa5.04□□□□□ -1.6
TCF4-245ENST00000570177 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
TCF4-245ENST00000570177 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
TCF4-245ENST00000570177 COX6B2Q6YFQ2 88 aa5.01□□□□□ -1.61
TCF4-245ENST00000570177 KRTAP4-1Q9BYQ7 146 aa5.01□□□□□ -1.61
TCF4-245ENST00000570177 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
TCF4-245ENST00000570177 MUC17Q685J3 4493 aa4.95□□□□□ -1.62
TCF4-245ENST00000570177 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
TCF4-245ENST00000570177 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
TCF4-245ENST00000570177 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
TCF4-245ENST00000570177 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
TCF4-245ENST00000570177 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
TCF4-245ENST00000570177 S4R3F8 94 aa4.81□□□□□ -1.64
TCF4-245ENST00000570177 MUC2Q02817 5179 aa4.8□□□□□ -1.64
TCF4-245ENST00000570177 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
TCF4-245ENST00000570177 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
TCF4-245ENST00000570177 RNF213Q63HN8 5207 aa4.73□□□□□ -1.65
TCF4-245ENST00000570177 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
TCF4-245ENST00000570177 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
TCF4-245ENST00000570177 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
TCF4-245ENST00000570177 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
TCF4-245ENST00000570177 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
TCF4-245ENST00000570177 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
TCF4-245ENST00000570177 FAT4Q6V0I7 4981 aa4.61□□□□□ -1.67
TCF4-245ENST00000570177 KRTAP13-4Q3LI77 160 aa4.61□□□□□ -1.67
TCF4-245ENST00000570177 MT1HP80294 61 aa4.6□□□□□ -1.67
TCF4-245ENST00000570177 INE1O15225 51 aa4.59□□□□□ -1.67
TCF4-245ENST00000570177 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
TCF4-245ENST00000570177 R4GN34 69 aa4.56□□□□□ -1.68
TCF4-245ENST00000570177 A0A0D9SG42 100 aa4.51□□□□□ -1.69
TCF4-245ENST00000570177 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
TCF4-245ENST00000570177 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
TCF4-245ENST00000570177 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
TCF4-245ENST00000570177 M0QZ58 72 aa4.47□□□□□ -1.69
TCF4-245ENST00000570177 MT2AP02795 61 aa4.44□□□□□ -1.7
TCF4-245ENST00000570177 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
TCF4-245ENST00000570177 M0R2T5 61 aa4.43□□□□□ -1.7
TCF4-245ENST00000570177 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
TCF4-245ENST00000570177 MT1FP04733 61 aa4.43□□□□□ -1.7
TCF4-245ENST00000570177 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
TCF4-245ENST00000570177 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
TCF4-245ENST00000570177 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
TCF4-245ENST00000570177 MT1BP07438 61 aa4.21□□□□□ -1.74
TCF4-245ENST00000570177 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
TCF4-245ENST00000570177 MT1XP80297 61 aa4.07□□□□□ -1.76
TCF4-245ENST00000570177 USH2AO75445 5202 aa4.04□□□□□ -1.76
TCF4-245ENST00000570177 TNP1P09430 55 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms