RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 FAT3Q8TDW7 4589 aa7.83□□□□□ -1.16
GCOM1-213ENST00000569945 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
GCOM1-213ENST00000569945 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
GCOM1-213ENST00000569945 SPINK1P00995 79 aa7.79□□□□□ -1.16
GCOM1-213ENST00000569945 TNXBP22105 4242 aa7.75□□□□□ -1.17
GCOM1-213ENST00000569945 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
GCOM1-213ENST00000569945 TYMSOSQ8TAI1 123 aa7.74□□□□□ -1.17
GCOM1-213ENST00000569945 KRTAP13-2Q52LG2 175 aa7.73□□□□□ -1.17
GCOM1-213ENST00000569945 A0A1B0GU33 70 aa7.72□□□□□ -1.17
GCOM1-213ENST00000569945 SSBP3-AS1Q7Z2R9 100 aa7.72□□□□□ -1.17
GCOM1-213ENST00000569945 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
GCOM1-213ENST00000569945 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
GCOM1-213ENST00000569945 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
GCOM1-213ENST00000569945 DMBT1Q9UGM3 2413 aaPredicted RBP7.61□□□□□ -1.19
GCOM1-213ENST00000569945 K7ERS5 55 aa7.57□□□□□ -1.2
GCOM1-213ENST00000569945 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
GCOM1-213ENST00000569945 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
GCOM1-213ENST00000569945 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
GCOM1-213ENST00000569945 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
GCOM1-213ENST00000569945 HERC1Q15751 4861 aa7.55□□□□□ -1.2
GCOM1-213ENST00000569945 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
GCOM1-213ENST00000569945 J3QL48 77 aa7.54□□□□□ -1.2
GCOM1-213ENST00000569945 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.2
GCOM1-213ENST00000569945 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
GCOM1-213ENST00000569945 A0A0A0MQY5 61 aa7.43□□□□□ -1.22
GCOM1-213ENST00000569945 RPL37P61927 97 aaKnown RBP7.4□□□□□ -1.22
GCOM1-213ENST00000569945 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
GCOM1-213ENST00000569945 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
GCOM1-213ENST00000569945 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
GCOM1-213ENST00000569945 LPAP08519 4548 aa7.35□□□□□ -1.23
GCOM1-213ENST00000569945 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
GCOM1-213ENST00000569945 KRTAP10-6P60371 365 aaPredicted RBP7.3□□□□□ -1.24
GCOM1-213ENST00000569945 LRP2P98164 4655 aa7.25□□□□□ -1.25
GCOM1-213ENST00000569945 A0A0D9SG42 100 aa7.24□□□□□ -1.25
GCOM1-213ENST00000569945 C9orf92A6NGG3 77 aa7.22□□□□□ -1.25
GCOM1-213ENST00000569945 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
GCOM1-213ENST00000569945 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
GCOM1-213ENST00000569945 S4R3F8 94 aa7.16□□□□□ -1.26
GCOM1-213ENST00000569945 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
GCOM1-213ENST00000569945 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
GCOM1-213ENST00000569945 XP32Q5T750 250 aa7.11□□□□□ -1.27
GCOM1-213ENST00000569945 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
GCOM1-213ENST00000569945 KRTAP12-1P59990 96 aa7.02□□□□□ -1.28
GCOM1-213ENST00000569945 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
GCOM1-213ENST00000569945 MUC2Q02817 5179 aa6.99□□□□□ -1.29
GCOM1-213ENST00000569945 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
GCOM1-213ENST00000569945 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
GCOM1-213ENST00000569945 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
GCOM1-213ENST00000569945 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
GCOM1-213ENST00000569945 M0QZ58 72 aa6.77□□□□□ -1.33
GCOM1-213ENST00000569945 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
GCOM1-213ENST00000569945 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
GCOM1-213ENST00000569945 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
GCOM1-213ENST00000569945 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
GCOM1-213ENST00000569945 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
GCOM1-213ENST00000569945 MT1HP80294 61 aa6.47□□□□□ -1.37
GCOM1-213ENST00000569945 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
GCOM1-213ENST00000569945 R4GN34 69 aa6.42□□□□□ -1.38
GCOM1-213ENST00000569945 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
GCOM1-213ENST00000569945 M0R2T5 61 aa6.35□□□□□ -1.39
GCOM1-213ENST00000569945 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
GCOM1-213ENST00000569945 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
GCOM1-213ENST00000569945 PRO2289Q9P1D8 64 aa6.26□□□□□ -1.41
GCOM1-213ENST00000569945 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
GCOM1-213ENST00000569945 MT2AP02795 61 aa6.15□□□□□ -1.42
GCOM1-213ENST00000569945 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
GCOM1-213ENST00000569945 MT1FP04733 61 aa6.13□□□□□ -1.43
GCOM1-213ENST00000569945 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
GCOM1-213ENST00000569945 INE1O15225 51 aa6.04□□□□□ -1.44
GCOM1-213ENST00000569945 TNP1P09430 55 aa6.04□□□□□ -1.44
GCOM1-213ENST00000569945 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
GCOM1-213ENST00000569945 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
GCOM1-213ENST00000569945 USH2AO75445 5202 aa5.9□□□□□ -1.46
GCOM1-213ENST00000569945 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
GCOM1-213ENST00000569945 LCE2BO14633 110 aa5.9□□□□□ -1.47
GCOM1-213ENST00000569945 LCE2DQ5TA82 110 aaPredicted RBP5.88□□□□□ -1.47
GCOM1-213ENST00000569945 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
GCOM1-213ENST00000569945 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
GCOM1-213ENST00000569945 SSPOA2VEC9 5147 aa5.78□□□□□ -1.48
GCOM1-213ENST00000569945 MT1BP07438 61 aa5.73□□□□□ -1.49
GCOM1-213ENST00000569945 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
GCOM1-213ENST00000569945 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
GCOM1-213ENST00000569945 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
GCOM1-213ENST00000569945 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
GCOM1-213ENST00000569945 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
GCOM1-213ENST00000569945 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
GCOM1-213ENST00000569945 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
GCOM1-213ENST00000569945 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
GCOM1-213ENST00000569945 MT1XP80297 61 aa5.47□□□□□ -1.53
GCOM1-213ENST00000569945 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
GCOM1-213ENST00000569945 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
GCOM1-213ENST00000569945 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
GCOM1-213ENST00000569945 KMT2DO14686 5537 aa5.3□□□□□ -1.56
GCOM1-213ENST00000569945 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
GCOM1-213ENST00000569945 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
GCOM1-213ENST00000569945 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
GCOM1-213ENST00000569945 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
GCOM1-213ENST00000569945 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
GCOM1-213ENST00000569945 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
GCOM1-213ENST00000569945 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms