RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 HRES1P13985 223 aa3.33□□□□□ -1.88
CYLD-216ENST00000569891 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
CYLD-216ENST00000569891 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
CYLD-216ENST00000569891 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
CYLD-216ENST00000569891 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
CYLD-216ENST00000569891 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
CYLD-216ENST00000569891 Q1T7F1 81 aa3.3□□□□□ -1.88
CYLD-216ENST00000569891 DMBT1Q9UGM3 2413 aaPredicted RBP3.29□□□□□ -1.88
CYLD-216ENST00000569891 TPRXLQ17RH7 258 aa3.29□□□□□ -1.88
CYLD-216ENST00000569891 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
CYLD-216ENST00000569891 SPINK7P58062 85 aa3.28□□□□□ -1.88
CYLD-216ENST00000569891 SEC61BP60468 96 aaKnown RBP3.28□□□□□ -1.89
CYLD-216ENST00000569891 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
CYLD-216ENST00000569891 LINC01558Q9Y6Z2 57 aa3.25□□□□□ -1.89
CYLD-216ENST00000569891 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
CYLD-216ENST00000569891 XP32Q5T750 250 aa3.24□□□□□ -1.89
CYLD-216ENST00000569891 A0A1B0GU69 56 aa3.24□□□□□ -1.89
CYLD-216ENST00000569891 PSPHP1O15172 72 aa3.23□□□□□ -1.89
CYLD-216ENST00000569891 KRTAP4-5Q9BYR2 181 aa3.23□□□□□ -1.89
CYLD-216ENST00000569891 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
CYLD-216ENST00000569891 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
CYLD-216ENST00000569891 PRO0628Q9UI54 55 aa3.18□□□□□ -1.9
CYLD-216ENST00000569891 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
CYLD-216ENST00000569891 UQCR11O14957 56 aa3.17□□□□□ -1.9
CYLD-216ENST00000569891 S4R3F8 94 aa3.16□□□□□ -1.9
CYLD-216ENST00000569891 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
CYLD-216ENST00000569891 M0R2T5 61 aa3.15□□□□□ -1.91
CYLD-216ENST00000569891 Q5VV11 94 aa3.14□□□□□ -1.91
CYLD-216ENST00000569891 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
CYLD-216ENST00000569891 CSAG1Q6PB30 78 aa3.13□□□□□ -1.91
CYLD-216ENST00000569891 LINC01554Q52M75 96 aa3.13□□□□□ -1.91
CYLD-216ENST00000569891 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
CYLD-216ENST00000569891 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
CYLD-216ENST00000569891 KMT2DO14686 5537 aa3.09□□□□□ -1.91
CYLD-216ENST00000569891 A0A1B0GU33 70 aa3.08□□□□□ -1.92
CYLD-216ENST00000569891 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
CYLD-216ENST00000569891 SPINT4Q6UDR6 99 aa3.07□□□□□ -1.92
CYLD-216ENST00000569891 SPATA8Q6RVD6 105 aa3.06□□□□□ -1.92
CYLD-216ENST00000569891 KRTAP3-1Q9BYR8 98 aa3.06□□□□□ -1.92
CYLD-216ENST00000569891 A0A0D9SG42 100 aa3.05□□□□□ -1.92
CYLD-216ENST00000569891 LCA10Q71F78 164 aa3.05□□□□□ -1.92
CYLD-216ENST00000569891 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
CYLD-216ENST00000569891 H0YAA0 97 aa3.02□□□□□ -1.93
CYLD-216ENST00000569891 M0QZ58 72 aa3.01□□□□□ -1.93
CYLD-216ENST00000569891 ADM2Q7Z4H4 148 aa2.98□□□□□ -1.93
CYLD-216ENST00000569891 R4GN34 69 aa2.96□□□□□ -1.93
CYLD-216ENST00000569891 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
CYLD-216ENST00000569891 KTN1-AS1Q86SY8 53 aa2.94□□□□□ -1.94
CYLD-216ENST00000569891 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
CYLD-216ENST00000569891 A6NN06 94 aa2.91□□□□□ -1.94
CYLD-216ENST00000569891 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.95
CYLD-216ENST00000569891 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
CYLD-216ENST00000569891 P0C880 135 aa2.87□□□□□ -1.95
CYLD-216ENST00000569891 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
CYLD-216ENST00000569891 A8MU10 97 aa2.85□□□□□ -1.95
CYLD-216ENST00000569891 ROMO1P60602 79 aa2.85□□□□□ -1.95
CYLD-216ENST00000569891 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
CYLD-216ENST00000569891 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
CYLD-216ENST00000569891 KRTAP23-1A1A580 65 aa2.8□□□□□ -1.96
CYLD-216ENST00000569891 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
CYLD-216ENST00000569891 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
CYLD-216ENST00000569891 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
CYLD-216ENST00000569891 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
CYLD-216ENST00000569891 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
CYLD-216ENST00000569891 MT1HP80294 61 aa2.74□□□□□ -1.97
CYLD-216ENST00000569891 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
CYLD-216ENST00000569891 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
CYLD-216ENST00000569891 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
CYLD-216ENST00000569891 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
CYLD-216ENST00000569891 SPRR2GQ9BYE4 73 aa2.69□□□□□ -1.98
CYLD-216ENST00000569891 TNP1P09430 55 aa2.69□□□□□ -1.98
CYLD-216ENST00000569891 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
CYLD-216ENST00000569891 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
CYLD-216ENST00000569891 MT2AP02795 61 aa2.65□□□□□ -1.99
CYLD-216ENST00000569891 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
CYLD-216ENST00000569891 KRTAP15-1Q3LI76 137 aa2.63□□□□□ -1.99
CYLD-216ENST00000569891 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
CYLD-216ENST00000569891 KRTAP9-8Q9BYQ0 159 aa2.61□□□□□ -1.99
CYLD-216ENST00000569891 MT1FP04733 61 aa2.6□□□□□ -1.99
CYLD-216ENST00000569891 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
CYLD-216ENST00000569891 C10orf95Q9H7T3 257 aa2.59□□□□□ -2
CYLD-216ENST00000569891 KRTAP19-1Q8IUB9 90 aa2.58□□□□□ -2
CYLD-216ENST00000569891 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
CYLD-216ENST00000569891 KRTAP19-4Q3LI73 84 aa2.54□□□□□ -2
CYLD-216ENST00000569891 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2.01
CYLD-216ENST00000569891 LOC100996750A0A140TA64 210 aa2.52□□□□□ -2.01
CYLD-216ENST00000569891 KRTAP4-6Q9BYQ5 205 aa2.52□□□□□ -2.01
CYLD-216ENST00000569891 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
CYLD-216ENST00000569891 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
CYLD-216ENST00000569891 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
CYLD-216ENST00000569891 MT1BP07438 61 aa2.48□□□□□ -2.01
CYLD-216ENST00000569891 KRTAP9-2Q9BYQ4 174 aa2.48□□□□□ -2.01
CYLD-216ENST00000569891 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
CYLD-216ENST00000569891 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
CYLD-216ENST00000569891 KRTAP4-8Q9BYQ9 185 aa2.43□□□□□ -2.02
CYLD-216ENST00000569891 MT1XP80297 61 aa2.42□□□□□ -2.02
CYLD-216ENST00000569891 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
CYLD-216ENST00000569891 KRTAP8-1Q8IUC2 63 aa2.39□□□□□ -2.03
CYLD-216ENST00000569891 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
CYLD-216ENST00000569891 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms