RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
SNAPC5-208ENST00000568875 LCA10Q71F78 164 aa6.33□□□□□ -1.4
SNAPC5-208ENST00000568875 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
SNAPC5-208ENST00000568875 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
SNAPC5-208ENST00000568875 IGKV2D-30A0A075B6S6 120 aa6.27□□□□□ -1.41
SNAPC5-208ENST00000568875 A8MU10 97 aa6.27□□□□□ -1.41
SNAPC5-208ENST00000568875 XP32Q5T750 250 aa6.25□□□□□ -1.41
SNAPC5-208ENST00000568875 SPINK7P58062 85 aa6.25□□□□□ -1.41
SNAPC5-208ENST00000568875 C7orf65Q6ZTY9 151 aa6.25□□□□□ -1.41
SNAPC5-208ENST00000568875 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
SNAPC5-208ENST00000568875 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
SNAPC5-208ENST00000568875 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
SNAPC5-208ENST00000568875 A0A1B0GU69 56 aa6.22□□□□□ -1.41
SNAPC5-208ENST00000568875 KRTAP4-1Q9BYQ7 146 aa6.21□□□□□ -1.42
SNAPC5-208ENST00000568875 A6NN06 94 aa6.2□□□□□ -1.42
SNAPC5-208ENST00000568875 C20orf166-AS1Q96NR2 134 aa6.2□□□□□ -1.42
SNAPC5-208ENST00000568875 A8MUU9 505 aa6.19□□□□□ -1.42
SNAPC5-208ENST00000568875 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
SNAPC5-208ENST00000568875 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
SNAPC5-208ENST00000568875 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
SNAPC5-208ENST00000568875 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
SNAPC5-208ENST00000568875 UQCR11O14957 56 aa6.13□□□□□ -1.43
SNAPC5-208ENST00000568875 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
SNAPC5-208ENST00000568875 RPL37P61927 97 aaKnown RBP6.08□□□□□ -1.44
SNAPC5-208ENST00000568875 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
SNAPC5-208ENST00000568875 SEC61GP60059 68 aa6.07□□□□□ -1.44
SNAPC5-208ENST00000568875 KRTAP19-2Q3LHN2 52 aa6.05□□□□□ -1.44
SNAPC5-208ENST00000568875 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
SNAPC5-208ENST00000568875 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
SNAPC5-208ENST00000568875 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.45
SNAPC5-208ENST00000568875 FLGP20930 4061 aaPredicted RBP5.95□□□□□ -1.46
SNAPC5-208ENST00000568875 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
SNAPC5-208ENST00000568875 MT1HP80294 61 aa5.94□□□□□ -1.46
SNAPC5-208ENST00000568875 A0A1B0GU33 70 aa5.9□□□□□ -1.47
SNAPC5-208ENST00000568875 H1FX-AS1Q4G0G2 97 aa5.88□□□□□ -1.47
SNAPC5-208ENST00000568875 H0YAA0 97 aa5.86□□□□□ -1.47
SNAPC5-208ENST00000568875 H3BS24 57 aa5.83□□□□□ -1.48
SNAPC5-208ENST00000568875 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
SNAPC5-208ENST00000568875 M0R2T5 61 aa5.8□□□□□ -1.48
SNAPC5-208ENST00000568875 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
SNAPC5-208ENST00000568875 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
SNAPC5-208ENST00000568875 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
SNAPC5-208ENST00000568875 K7ERS5 55 aa5.75□□□□□ -1.49
SNAPC5-208ENST00000568875 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
SNAPC5-208ENST00000568875 S4R3F8 94 aa5.74□□□□□ -1.49
SNAPC5-208ENST00000568875 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
SNAPC5-208ENST00000568875 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
SNAPC5-208ENST00000568875 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
SNAPC5-208ENST00000568875 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.51
SNAPC5-208ENST00000568875 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SNAPC5-208ENST00000568875 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
SNAPC5-208ENST00000568875 ROMO1P60602 79 aa5.57□□□□□ -1.52
SNAPC5-208ENST00000568875 MT2AP02795 61 aa5.56□□□□□ -1.52
SNAPC5-208ENST00000568875 P0C880 135 aa5.56□□□□□ -1.52
SNAPC5-208ENST00000568875 M0QZ58 72 aa5.53□□□□□ -1.52
SNAPC5-208ENST00000568875 USH2AO75445 5202 aa5.53□□□□□ -1.52
SNAPC5-208ENST00000568875 MT1FP04733 61 aa5.51□□□□□ -1.53
SNAPC5-208ENST00000568875 A0A0D9SG42 100 aa5.5□□□□□ -1.53
SNAPC5-208ENST00000568875 KRTAP10-10P60014 251 aa5.48□□□□□ -1.53
SNAPC5-208ENST00000568875 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
SNAPC5-208ENST00000568875 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
SNAPC5-208ENST00000568875 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
SNAPC5-208ENST00000568875 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
SNAPC5-208ENST00000568875 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
SNAPC5-208ENST00000568875 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
SNAPC5-208ENST00000568875 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
SNAPC5-208ENST00000568875 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
SNAPC5-208ENST00000568875 R4GN34 69 aa5.31□□□□□ -1.56
SNAPC5-208ENST00000568875 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
SNAPC5-208ENST00000568875 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
SNAPC5-208ENST00000568875 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
SNAPC5-208ENST00000568875 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
SNAPC5-208ENST00000568875 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
SNAPC5-208ENST00000568875 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
SNAPC5-208ENST00000568875 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
SNAPC5-208ENST00000568875 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
SNAPC5-208ENST00000568875 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
SNAPC5-208ENST00000568875 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
SNAPC5-208ENST00000568875 MT1BP07438 61 aa5.09□□□□□ -1.6
SNAPC5-208ENST00000568875 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.6
SNAPC5-208ENST00000568875 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
SNAPC5-208ENST00000568875 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
SNAPC5-208ENST00000568875 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
SNAPC5-208ENST00000568875 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
SNAPC5-208ENST00000568875 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
SNAPC5-208ENST00000568875 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
SNAPC5-208ENST00000568875 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
SNAPC5-208ENST00000568875 TNP1P09430 55 aa4.89□□□□□ -1.63
SNAPC5-208ENST00000568875 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
SNAPC5-208ENST00000568875 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
SNAPC5-208ENST00000568875 NEBP20929 6669 aa4.79□□□□□ -1.64
SNAPC5-208ENST00000568875 MT1XP80297 61 aa4.77□□□□□ -1.65
SNAPC5-208ENST00000568875 KMT2DO14686 5537 aa4.76□□□□□ -1.65
SNAPC5-208ENST00000568875 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
SNAPC5-208ENST00000568875 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
SNAPC5-208ENST00000568875 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
SNAPC5-208ENST00000568875 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
SNAPC5-208ENST00000568875 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
SNAPC5-208ENST00000568875 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
SNAPC5-208ENST00000568875 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms