RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 UQCRQO14949 82 aa6.23□□□□□ -1.41
CNOT1-213ENST00000568158 C1orf64Q8NEQ6 169 aa6.23□□□□□ -1.41
CNOT1-213ENST00000568158 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
CNOT1-213ENST00000568158 H0Y9P7 68 aa6.2□□□□□ -1.42
CNOT1-213ENST00000568158 LOC101927531A0A1B0GV80 90 aa6.19□□□□□ -1.42
CNOT1-213ENST00000568158 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
CNOT1-213ENST00000568158 OCR1Q9BZK8 76 aa6.15□□□□□ -1.42
CNOT1-213ENST00000568158 ATOX1O00244 68 aa6.14□□□□□ -1.43
CNOT1-213ENST00000568158 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
CNOT1-213ENST00000568158 LINC00208Q96KT6 92 aa6.13□□□□□ -1.43
CNOT1-213ENST00000568158 S4R3F8 94 aa6.13□□□□□ -1.43
CNOT1-213ENST00000568158 K7ERU9 68 aa6.12□□□□□ -1.43
CNOT1-213ENST00000568158 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
CNOT1-213ENST00000568158 LCA10Q71F78 164 aa6.11□□□□□ -1.43
CNOT1-213ENST00000568158 SCGB1A1P11684 91 aa6.09□□□□□ -1.43
CNOT1-213ENST00000568158 KLKP1Q107X0 134 aa6.09□□□□□ -1.43
CNOT1-213ENST00000568158 MP68P56378 58 aa6.08□□□□□ -1.44
CNOT1-213ENST00000568158 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
CNOT1-213ENST00000568158 USH2AO75445 5202 aa6.06□□□□□ -1.44
CNOT1-213ENST00000568158 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
CNOT1-213ENST00000568158 H3BPC8 53 aa6.01□□□□□ -1.45
CNOT1-213ENST00000568158 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
CNOT1-213ENST00000568158 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
CNOT1-213ENST00000568158 SSPOA2VEC9 5147 aa5.97□□□□□ -1.45
CNOT1-213ENST00000568158 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
CNOT1-213ENST00000568158 A8MUN3 132 aa5.95□□□□□ -1.46
CNOT1-213ENST00000568158 NDUFC1O43677 76 aa5.94□□□□□ -1.46
CNOT1-213ENST00000568158 SMIM20Q8N5G0 67 aa5.92□□□□□ -1.46
CNOT1-213ENST00000568158 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
CNOT1-213ENST00000568158 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
CNOT1-213ENST00000568158 SNURFQ9Y675 71 aa5.84□□□□□ -1.47
CNOT1-213ENST00000568158 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
CNOT1-213ENST00000568158 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-213ENST00000568158 H0YAA0 97 aa5.81□□□□□ -1.48
CNOT1-213ENST00000568158 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
CNOT1-213ENST00000568158 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
CNOT1-213ENST00000568158 MT1BP07438 61 aa5.79□□□□□ -1.48
CNOT1-213ENST00000568158 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
CNOT1-213ENST00000568158 ACYP2P14621 99 aa5.78□□□□□ -1.48
CNOT1-213ENST00000568158 C20orf197Q8N268 126 aa5.78□□□□□ -1.48
CNOT1-213ENST00000568158 CRIPTQ9P021 101 aa5.77□□□□□ -1.49
CNOT1-213ENST00000568158 Q5VV11 94 aa5.76□□□□□ -1.49
CNOT1-213ENST00000568158 P0C880 135 aa5.71□□□□□ -1.5
CNOT1-213ENST00000568158 SPANXA2-OT1Q8N9U9 137 aa5.68□□□□□ -1.5
CNOT1-213ENST00000568158 COX7CP15954 63 aa5.67□□□□□ -1.5
CNOT1-213ENST00000568158 CHKB-CPT1BH3BT56 60 aa5.66□□□□□ -1.5
CNOT1-213ENST00000568158 A6NN06 94 aa5.64□□□□□ -1.51
CNOT1-213ENST00000568158 SPTSSBQ8NFR3 76 aa5.64□□□□□ -1.51
CNOT1-213ENST00000568158 R4GN34 69 aa5.62□□□□□ -1.51
CNOT1-213ENST00000568158 M0QZ58 72 aa5.6□□□□□ -1.51
CNOT1-213ENST00000568158 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
CNOT1-213ENST00000568158 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
CNOT1-213ENST00000568158 MACF1Q9UPN3 7388 aaKnown RBP5.59□□□□□ -1.51
CNOT1-213ENST00000568158 H3BS24 57 aa5.58□□□□□ -1.52
CNOT1-213ENST00000568158 H7BZZ5 65 aa5.55□□□□□ -1.52
CNOT1-213ENST00000568158 COA5Q86WW8 74 aa5.55□□□□□ -1.52
CNOT1-213ENST00000568158 ANAPC13Q9BS18 74 aa5.55□□□□□ -1.52
CNOT1-213ENST00000568158 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
CNOT1-213ENST00000568158 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
CNOT1-213ENST00000568158 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
CNOT1-213ENST00000568158 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
CNOT1-213ENST00000568158 MT1XP80297 61 aa5.46□□□□□ -1.54
CNOT1-213ENST00000568158 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
CNOT1-213ENST00000568158 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
CNOT1-213ENST00000568158 PRO2289Q9P1D8 64 aa5.41□□□□□ -1.54
CNOT1-213ENST00000568158 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
CNOT1-213ENST00000568158 SEC61GP60059 68 aa5.36□□□□□ -1.55
CNOT1-213ENST00000568158 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-213ENST00000568158 A0A1B0GU33 70 aa5.29□□□□□ -1.56
CNOT1-213ENST00000568158 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
CNOT1-213ENST00000568158 A0A0D9SG42 100 aa5.26□□□□□ -1.57
CNOT1-213ENST00000568158 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-213ENST00000568158 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
CNOT1-213ENST00000568158 A0A1B0GU69 56 aa5.25□□□□□ -1.57
CNOT1-213ENST00000568158 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
CNOT1-213ENST00000568158 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-213ENST00000568158 KMT2DO14686 5537 aa5.22□□□□□ -1.57
CNOT1-213ENST00000568158 TMEM258P61165 79 aa5.2□□□□□ -1.58
CNOT1-213ENST00000568158 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
CNOT1-213ENST00000568158 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
CNOT1-213ENST00000568158 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
CNOT1-213ENST00000568158 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
CNOT1-213ENST00000568158 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
CNOT1-213ENST00000568158 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
CNOT1-213ENST00000568158 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
CNOT1-213ENST00000568158 LINC01558Q9Y6Z2 57 aa5.15□□□□□ -1.59
CNOT1-213ENST00000568158 A8MU10 97 aa5.13□□□□□ -1.59
CNOT1-213ENST00000568158 NEBP20929 6669 aa5.12□□□□□ -1.59
CNOT1-213ENST00000568158 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
CNOT1-213ENST00000568158 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
CNOT1-213ENST00000568158 SPRR2EP22531 72 aa5.04□□□□□ -1.6
CNOT1-213ENST00000568158 SPRR2BP35325 72 aa5.04□□□□□ -1.6
CNOT1-213ENST00000568158 SPRR2AP35326 72 aa5.04□□□□□ -1.6
CNOT1-213ENST00000568158 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
CNOT1-213ENST00000568158 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
CNOT1-213ENST00000568158 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
CNOT1-213ENST00000568158 UQCR11O14957 56 aa4.97□□□□□ -1.61
CNOT1-213ENST00000568158 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
CNOT1-213ENST00000568158 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
CNOT1-213ENST00000568158 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms