RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
LINC01228-201ENST00000567966 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
LINC01228-201ENST00000567966 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
LINC01228-201ENST00000567966 C1orf64Q8NEQ6 169 aa5.93□□□□□ -1.46
LINC01228-201ENST00000567966 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
LINC01228-201ENST00000567966 A8MUU9 505 aa5.91□□□□□ -1.46
LINC01228-201ENST00000567966 ATP11AUNQ6ZP68 121 aa5.91□□□□□ -1.46
LINC01228-201ENST00000567966 NOTCH2NLQ7Z3S9 236 aa5.91□□□□□ -1.46
LINC01228-201ENST00000567966 PCOTHQ58A44 107 aa5.89□□□□□ -1.47
LINC01228-201ENST00000567966 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
LINC01228-201ENST00000567966 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
LINC01228-201ENST00000567966 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
LINC01228-201ENST00000567966 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
LINC01228-201ENST00000567966 LOC101927531A0A1B0GV80 90 aa5.86□□□□□ -1.47
LINC01228-201ENST00000567966 CYP4F30PQ9H0H9 118 aa5.86□□□□□ -1.47
LINC01228-201ENST00000567966 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
LINC01228-201ENST00000567966 MT1HP80294 61 aa5.8□□□□□ -1.48
LINC01228-201ENST00000567966 Q5W150 140 aa5.79□□□□□ -1.48
LINC01228-201ENST00000567966 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
LINC01228-201ENST00000567966 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
LINC01228-201ENST00000567966 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
LINC01228-201ENST00000567966 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
LINC01228-201ENST00000567966 V9GYY9 64 aa5.68□□□□□ -1.5
LINC01228-201ENST00000567966 HRES1P13985 223 aa5.67□□□□□ -1.5
LINC01228-201ENST00000567966 ACYP2P14621 99 aa5.67□□□□□ -1.5
LINC01228-201ENST00000567966 SPINK7P58062 85 aa5.67□□□□□ -1.5
LINC01228-201ENST00000567966 IGKV2D-30A0A075B6S6 120 aa5.66□□□□□ -1.5
LINC01228-201ENST00000567966 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
LINC01228-201ENST00000567966 COA5Q86WW8 74 aa5.66□□□□□ -1.5
LINC01228-201ENST00000567966 Q1T7F1 81 aa5.65□□□□□ -1.5
LINC01228-201ENST00000567966 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.5
LINC01228-201ENST00000567966 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.5
LINC01228-201ENST00000567966 M0R2T5 61 aa5.64□□□□□ -1.51
LINC01228-201ENST00000567966 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
LINC01228-201ENST00000567966 C4orf26Q17RF5 130 aa5.63□□□□□ -1.51
LINC01228-201ENST00000567966 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
LINC01228-201ENST00000567966 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
LINC01228-201ENST00000567966 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
LINC01228-201ENST00000567966 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
LINC01228-201ENST00000567966 A8MUN3 132 aa5.58□□□□□ -1.52
LINC01228-201ENST00000567966 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
LINC01228-201ENST00000567966 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
LINC01228-201ENST00000567966 PSPHP1O15172 72 aa5.49□□□□□ -1.53
LINC01228-201ENST00000567966 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
LINC01228-201ENST00000567966 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
LINC01228-201ENST00000567966 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
LINC01228-201ENST00000567966 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
LINC01228-201ENST00000567966 Q5VV11 94 aa5.44□□□□□ -1.54
LINC01228-201ENST00000567966 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
LINC01228-201ENST00000567966 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
LINC01228-201ENST00000567966 A0A1B0GU69 56 aa5.4□□□□□ -1.54
LINC01228-201ENST00000567966 MT2AP02795 61 aa5.39□□□□□ -1.55
LINC01228-201ENST00000567966 A6NED7 52 aa5.37□□□□□ -1.55
LINC01228-201ENST00000567966 SEC61GP60059 68 aa5.37□□□□□ -1.55
LINC01228-201ENST00000567966 USH2AO75445 5202 aa5.36□□□□□ -1.55
LINC01228-201ENST00000567966 MT1FP04733 61 aa5.36□□□□□ -1.55
LINC01228-201ENST00000567966 SSPOA2VEC9 5147 aa5.34□□□□□ -1.56
LINC01228-201ENST00000567966 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
LINC01228-201ENST00000567966 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
LINC01228-201ENST00000567966 S4R3F8 94 aa5.29□□□□□ -1.56
LINC01228-201ENST00000567966 UQCR11O14957 56 aa5.28□□□□□ -1.56
LINC01228-201ENST00000567966 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
LINC01228-201ENST00000567966 LCA10Q71F78 164 aa5.25□□□□□ -1.57
LINC01228-201ENST00000567966 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
LINC01228-201ENST00000567966 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
LINC01228-201ENST00000567966 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
LINC01228-201ENST00000567966 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
LINC01228-201ENST00000567966 A0A1B0GU33 70 aa5.18□□□□□ -1.58
LINC01228-201ENST00000567966 A8MU10 97 aa5.16□□□□□ -1.58
LINC01228-201ENST00000567966 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
LINC01228-201ENST00000567966 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
LINC01228-201ENST00000567966 H0YAA0 97 aa5.13□□□□□ -1.59
LINC01228-201ENST00000567966 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
LINC01228-201ENST00000567966 CRIPTQ9P021 101 aa5.07□□□□□ -1.6
LINC01228-201ENST00000567966 A6NN06 94 aa5.06□□□□□ -1.6
LINC01228-201ENST00000567966 ADM2Q7Z4H4 148 aa5.03□□□□□ -1.6
LINC01228-201ENST00000567966 K7ERS5 55 aa5.02□□□□□ -1.61
LINC01228-201ENST00000567966 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
LINC01228-201ENST00000567966 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
LINC01228-201ENST00000567966 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
LINC01228-201ENST00000567966 P0C880 135 aa4.98□□□□□ -1.61
LINC01228-201ENST00000567966 M0QZ58 72 aa4.97□□□□□ -1.61
LINC01228-201ENST00000567966 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
LINC01228-201ENST00000567966 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
LINC01228-201ENST00000567966 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
LINC01228-201ENST00000567966 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
LINC01228-201ENST00000567966 MT1BP07438 61 aa4.89□□□□□ -1.63
LINC01228-201ENST00000567966 A0A0D9SG42 100 aa4.88□□□□□ -1.63
LINC01228-201ENST00000567966 R4GN34 69 aa4.88□□□□□ -1.63
LINC01228-201ENST00000567966 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
LINC01228-201ENST00000567966 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
LINC01228-201ENST00000567966 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
LINC01228-201ENST00000567966 ROMO1P60602 79 aa4.78□□□□□ -1.64
LINC01228-201ENST00000567966 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
LINC01228-201ENST00000567966 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
LINC01228-201ENST00000567966 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
LINC01228-201ENST00000567966 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
LINC01228-201ENST00000567966 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
LINC01228-201ENST00000567966 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
LINC01228-201ENST00000567966 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms