RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 APOBP04114 4563 aaKnown RBP0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 FRYLO94915 3013 aa0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 GCN1Q92616 2671 aaKnown RBP0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 CHD7Q9P2D1 2997 aa0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 DNAH1Q9P2D7 4330 aa0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 FLNBO75369 2602 aaKnown RBP0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 PKD1P98161 4303 aa0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 NBEAL2Q6ZNJ1 2754 aa0.39□□□□□ -2.35
SHCBP1-206ENST00000567698 HIVEP1P15822 2718 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 NF1P21359 2839 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 NBEAL1Q6ZS30 2694 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 MGAQ8IWI9 3026 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 GPR98Q8WXG9 6306 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 WDR87Q6ZQQ6 2873 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 TEX15Q9BXT5 2789 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 FAT3Q8TDW7 4589 aa0.38□□□□□ -2.35
SHCBP1-206ENST00000567698 PKD1L1Q8TDX9 2849 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 CEP295Q9C0D2 2601 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 CHD8Q9HCK8 2581 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 ZFHX4Q86UP3 3567 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 HTN3P15516 51 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 CFAP46Q8IYW2 2715 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 TEP1Q99973 2627 aaKnown RBP0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 MUC5ACP98088 5654 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 DNAH5Q8TE73 4624 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 USP9XQ93008 2570 aaPredicted RBP0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 PKHD1P08F94 4074 aa0.37□□□□□ -2.35
SHCBP1-206ENST00000567698 FASNP49327 2511 aaKnown RBP0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 SPG11Q96JI7 2443 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 TACC2O95359 2948 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 STAB1Q9NY15 2570 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 SPENQ96T58 3664 aaKnown RBP0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 CELSR3Q9NYQ7 3312 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 DNAH6Q9C0G6 4158 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 ITPR2Q14571 2701 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 SMR3BP02814 79 aaPredicted RBP0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 SPRR2EP22531 72 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 KRTAP19-5Q3LI72 72 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 FLNAP21333 2647 aaKnown RBP0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 TGP01266 2768 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 COL7A1Q02388 2944 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 PLECQ15149 4684 aaKnown RBP0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 LYSTQ99698 3801 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 CSMD1Q96PZ7 3565 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 TRIOO75962 3097 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 ZANQ9Y493 2812 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 MYO18BQ8IUG5 2567 aa0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 SPTAN1Q13813 2472 aaKnown RBP0.36□□□□□ -2.35
SHCBP1-206ENST00000567698 HMCN2Q8NDA2 5059 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 HSPG2P98160 4391 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 CEP350Q5VT06 3117 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 MT1EP04732 61 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 RELNP78509 3460 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 CUBNO60494 3623 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 SMG1Q96Q15 3661 aaKnown RBP0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 DNAH7Q8WXX0 4024 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 DOPEY1Q5JWR5 2465 aa0.35□□□□□ -2.35
SHCBP1-206ENST00000567698 ASPMQ8IZT6 3477 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 DYNC1H1Q14204 4646 aaKnown RBP0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 NBEAQ8NFP9 2946 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 FLGP20930 4061 aaPredicted RBP0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 DMDP11532 3685 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 MGAM2Q2M2H8 2515 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 TLN2Q9Y4G6 2542 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 MXRA5Q9NR99 2828 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 SZT2Q5T011 3432 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 CENPEQ02224 2701 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 LRBAP50851 2863 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 FRYQ5TBA9 3013 aa0.34□□□□□ -2.35
SHCBP1-206ENST00000567698 DCHS2Q6V1P9 2916 aa0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 DNAH12Q6ZR08 3092 aa0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 SPRR2GQ9BYE4 73 aa0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 TRRAPQ9Y4A5 3859 aa0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 CFAP47Q6ZTR5 3102 aa0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 PDZD2O15018 2839 aa0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 MUC3AQ02505 3323 aa0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 SPTBN5Q9NRC6 3674 aaKnown RBP0.34□□□□□ -2.36
SHCBP1-206ENST00000567698 ACACBO00763 2458 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 LAMA3Q16787 3333 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 HECTD4Q9Y4D8 3996 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 DMXL2Q8TDJ6 3036 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 MUC17Q685J3 4493 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 IGSF10Q6WRI0 2623 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 MT1HP80294 61 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 LOC400499M0QZD8 3231 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 CFAP54Q96N23 3096 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 SONP18583 2426 aaKnown RBP0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 ZZEF1O43149 2961 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 KALRNO60229 2985 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 VPS13AQ96RL7 3174 aa0.33□□□□□ -2.36
SHCBP1-206ENST00000567698 SVEP1Q4LDE5 3571 aa0.32□□□□□ -2.36
SHCBP1-206ENST00000567698 TLN1Q9Y490 2541 aaKnown RBP0.32□□□□□ -2.36
SHCBP1-206ENST00000567698 USP34Q70CQ2 3546 aa0.32□□□□□ -2.36
SHCBP1-206ENST00000567698 STAB2Q8WWQ8 2551 aa0.32□□□□□ -2.36
SHCBP1-206ENST00000567698 UTRNP46939 3433 aa0.32□□□□□ -2.36
SHCBP1-206ENST00000567698 MT1LQ93083 61 aa0.32□□□□□ -2.36
SHCBP1-206ENST00000567698 BOD1L1Q8NFC6 3051 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms