RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 C5orf47Q569G3 176 aa4.77□□□□□ -1.65
GTF3C1-206ENST00000566779 F8W1H4 67 aa4.76□□□□□ -1.65
GTF3C1-206ENST00000566779 FAM236AA0A1B0GUQ0 79 aa4.75□□□□□ -1.65
GTF3C1-206ENST00000566779 FAM236BA0A1B0GV22 79 aa4.75□□□□□ -1.65
GTF3C1-206ENST00000566779 S4R3F8 94 aa4.74□□□□□ -1.65
GTF3C1-206ENST00000566779 C1orf64Q8NEQ6 169 aa4.73□□□□□ -1.65
GTF3C1-206ENST00000566779 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
GTF3C1-206ENST00000566779 TP53AIP1Q9HCN2 124 aa4.72□□□□□ -1.65
GTF3C1-206ENST00000566779 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
GTF3C1-206ENST00000566779 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
GTF3C1-206ENST00000566779 LCA10Q71F78 164 aa4.68□□□□□ -1.66
GTF3C1-206ENST00000566779 TRAV22A0A0B4J277 110 aa4.66□□□□□ -1.66
GTF3C1-206ENST00000566779 CSAG1Q6PB30 78 aa4.66□□□□□ -1.66
GTF3C1-206ENST00000566779 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.67
GTF3C1-206ENST00000566779 ACYP1P07311 99 aa4.64□□□□□ -1.67
GTF3C1-206ENST00000566779 ATP5EP2Q5VTU8 51 aa4.64□□□□□ -1.67
GTF3C1-206ENST00000566779 MACF1Q9UPN3 7388 aaKnown RBP4.64□□□□□ -1.67
GTF3C1-206ENST00000566779 LOC101927531A0A1B0GV80 90 aa4.63□□□□□ -1.67
GTF3C1-206ENST00000566779 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
GTF3C1-206ENST00000566779 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
GTF3C1-206ENST00000566779 H0Y9P7 68 aa4.62□□□□□ -1.67
GTF3C1-206ENST00000566779 A0A087WVE0 104 aa4.61□□□□□ -1.67
GTF3C1-206ENST00000566779 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
GTF3C1-206ENST00000566779 MT3P25713 68 aa4.6□□□□□ -1.67
GTF3C1-206ENST00000566779 UQCRQO14949 82 aa4.58□□□□□ -1.68
GTF3C1-206ENST00000566779 A0A1B0GV90 55 aa4.57□□□□□ -1.68
GTF3C1-206ENST00000566779 ATOX1O00244 68 aa4.56□□□□□ -1.68
GTF3C1-206ENST00000566779 Q5VV11 94 aa4.56□□□□□ -1.68
GTF3C1-206ENST00000566779 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
GTF3C1-206ENST00000566779 LINC00643Q86TS7 51 aa4.55□□□□□ -1.68
GTF3C1-206ENST00000566779 A6NN06 94 aa4.53□□□□□ -1.68
GTF3C1-206ENST00000566779 LINC00208Q96KT6 92 aa4.53□□□□□ -1.68
GTF3C1-206ENST00000566779 NDUFC1O43677 76 aa4.52□□□□□ -1.69
GTF3C1-206ENST00000566779 MT1BP07438 61 aa4.51□□□□□ -1.69
GTF3C1-206ENST00000566779 MP68P56378 58 aa4.51□□□□□ -1.69
GTF3C1-206ENST00000566779 SEC61GP60059 68 aa4.51□□□□□ -1.69
GTF3C1-206ENST00000566779 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
GTF3C1-206ENST00000566779 IMUPQ9GZP8 106 aa4.5□□□□□ -1.69
GTF3C1-206ENST00000566779 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
GTF3C1-206ENST00000566779 ADM2Q7Z4H4 148 aa4.46□□□□□ -1.7
GTF3C1-206ENST00000566779 A8MUN3 132 aa4.45□□□□□ -1.7
GTF3C1-206ENST00000566779 J3QR89 54 aa4.45□□□□□ -1.7
GTF3C1-206ENST00000566779 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
GTF3C1-206ENST00000566779 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
GTF3C1-206ENST00000566779 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
GTF3C1-206ENST00000566779 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
GTF3C1-206ENST00000566779 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
GTF3C1-206ENST00000566779 H0YAA0 97 aa4.38□□□□□ -1.71
GTF3C1-206ENST00000566779 H3BPC8 53 aa4.36□□□□□ -1.71
GTF3C1-206ENST00000566779 DMAC1Q96GE9 116 aa4.34□□□□□ -1.71
GTF3C1-206ENST00000566779 R4GN34 69 aa4.34□□□□□ -1.71
GTF3C1-206ENST00000566779 NEBP20929 6669 aa4.33□□□□□ -1.72
GTF3C1-206ENST00000566779 M0QZ58 72 aa4.33□□□□□ -1.72
GTF3C1-206ENST00000566779 P0C880 135 aa4.33□□□□□ -1.72
GTF3C1-206ENST00000566779 MT-ATP8P03928 68 aa4.32□□□□□ -1.72
GTF3C1-206ENST00000566779 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
GTF3C1-206ENST00000566779 C20orf197Q8N268 126 aa4.32□□□□□ -1.72
GTF3C1-206ENST00000566779 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
GTF3C1-206ENST00000566779 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
GTF3C1-206ENST00000566779 K7ERU9 68 aa4.27□□□□□ -1.73
GTF3C1-206ENST00000566779 CHKB-CPT1BH3BT56 60 aa4.26□□□□□ -1.73
GTF3C1-206ENST00000566779 TRAV7A0A075B6U4 112 aa4.25□□□□□ -1.73
GTF3C1-206ENST00000566779 ACYP2P14621 99 aa4.25□□□□□ -1.73
GTF3C1-206ENST00000566779 MT1XP80297 61 aa4.24□□□□□ -1.73
GTF3C1-206ENST00000566779 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
GTF3C1-206ENST00000566779 SMIM20Q8N5G0 67 aa4.24□□□□□ -1.73
GTF3C1-206ENST00000566779 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
GTF3C1-206ENST00000566779 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
GTF3C1-206ENST00000566779 SPTSSBQ8NFR3 76 aa4.23□□□□□ -1.73
GTF3C1-206ENST00000566779 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
GTF3C1-206ENST00000566779 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
GTF3C1-206ENST00000566779 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
GTF3C1-206ENST00000566779 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
GTF3C1-206ENST00000566779 KMT2DO14686 5537 aa4.17□□□□□ -1.74
GTF3C1-206ENST00000566779 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
GTF3C1-206ENST00000566779 SPRR2EP22531 72 aa4.14□□□□□ -1.75
GTF3C1-206ENST00000566779 SPRR2BP35325 72 aa4.14□□□□□ -1.75
GTF3C1-206ENST00000566779 SPRR2AP35326 72 aa4.14□□□□□ -1.75
GTF3C1-206ENST00000566779 SERP2Q8N6R1 65 aa4.11□□□□□ -1.75
GTF3C1-206ENST00000566779 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
GTF3C1-206ENST00000566779 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
GTF3C1-206ENST00000566779 SPANXA2-OT1Q8N9U9 137 aa4.08□□□□□ -1.76
GTF3C1-206ENST00000566779 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
GTF3C1-206ENST00000566779 COA5Q86WW8 74 aa4.05□□□□□ -1.76
GTF3C1-206ENST00000566779 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
GTF3C1-206ENST00000566779 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
GTF3C1-206ENST00000566779 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
GTF3C1-206ENST00000566779 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
GTF3C1-206ENST00000566779 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
GTF3C1-206ENST00000566779 A0A0D9SG42 100 aa4□□□□□ -1.77
GTF3C1-206ENST00000566779 SPRR2DP22532 72 aa4□□□□□ -1.77
GTF3C1-206ENST00000566779 SERP1Q9Y6X1 66 aa3.98□□□□□ -1.77
GTF3C1-206ENST00000566779 COX7CP15954 63 aa3.97□□□□□ -1.77
GTF3C1-206ENST00000566779 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
GTF3C1-206ENST00000566779 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
GTF3C1-206ENST00000566779 CYSTM1Q9H1C7 97 aa3.94□□□□□ -1.78
GTF3C1-206ENST00000566779 SPINT4Q6UDR6 99 aa3.93□□□□□ -1.78
GTF3C1-206ENST00000566779 H7BZZ5 65 aa3.91□□□□□ -1.78
GTF3C1-206ENST00000566779 A0A1B0GU33 70 aa3.9□□□□□ -1.79
GTF3C1-206ENST00000566779 ANAPC13Q9BS18 74 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 826 ms