RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 KRTAP10-4P60372 401 aaPredicted RBP11.53□□□□□ -0.56
SPSB3-208ENST00000566339 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
SPSB3-208ENST00000566339 C9orf92A6NGG3 77 aa11.51□□□□□ -0.57
SPSB3-208ENST00000566339 SMR3BP02814 79 aaPredicted RBP11.51□□□□□ -0.57
SPSB3-208ENST00000566339 K7ERS5 55 aa11.46□□□□□ -0.58
SPSB3-208ENST00000566339 Q5VSD8 79 aa11.45□□□□□ -0.58
SPSB3-208ENST00000566339 KRTAP25-1Q3LHN0 102 aa11.43□□□□□ -0.58
SPSB3-208ENST00000566339 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
SPSB3-208ENST00000566339 HERC1Q15751 4861 aa11.34□□□□□ -0.59
SPSB3-208ENST00000566339 FLG2Q5D862 2391 aaPredicted RBP11.33□□□□□ -0.6
SPSB3-208ENST00000566339 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
SPSB3-208ENST00000566339 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.62
SPSB3-208ENST00000566339 ROMO1P60602 79 aa11.16□□□□□ -0.62
SPSB3-208ENST00000566339 RPL37P61927 97 aaKnown RBP11.16□□□□□ -0.62
SPSB3-208ENST00000566339 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
SPSB3-208ENST00000566339 KRTAP10-6P60371 365 aaPredicted RBP11.14□□□□□ -0.63
SPSB3-208ENST00000566339 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
SPSB3-208ENST00000566339 J3QL48 77 aa11.09□□□□□ -0.63
SPSB3-208ENST00000566339 KRTAP10-8P60410 259 aa11.08□□□□□ -0.64
SPSB3-208ENST00000566339 S4R3F8 94 aa11.05□□□□□ -0.64
SPSB3-208ENST00000566339 TNXBP22105 4242 aa11.04□□□□□ -0.64
SPSB3-208ENST00000566339 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
SPSB3-208ENST00000566339 XP32Q5T750 250 aa10.95□□□□□ -0.66
SPSB3-208ENST00000566339 H3BS24 57 aa10.93□□□□□ -0.66
SPSB3-208ENST00000566339 KRTAP13-4Q3LI77 160 aa10.93□□□□□ -0.66
SPSB3-208ENST00000566339 HMCN2Q8NDA2 5059 aa10.87□□□□□ -0.67
SPSB3-208ENST00000566339 MT1HL1P0DM35 61 aa10.82□□□□□ -0.68
SPSB3-208ENST00000566339 A0A0D9SG42 100 aa10.81□□□□□ -0.68
SPSB3-208ENST00000566339 CRIPTQ9P021 101 aa10.8□□□□□ -0.68
SPSB3-208ENST00000566339 P0C880 135 aa10.77□□□□□ -0.69
SPSB3-208ENST00000566339 TPRXLQ17RH7 258 aa10.74□□□□□ -0.69
SPSB3-208ENST00000566339 UBR4Q5T4S7 5183 aa10.72□□□□□ -0.69
SPSB3-208ENST00000566339 M0QZ58 72 aa10.72□□□□□ -0.69
SPSB3-208ENST00000566339 KRTAP12-1P59990 96 aa10.64□□□□□ -0.71
SPSB3-208ENST00000566339 KRTAP12-2P59991 146 aa10.64□□□□□ -0.71
SPSB3-208ENST00000566339 SPINT4Q6UDR6 99 aa10.6□□□□□ -0.71
SPSB3-208ENST00000566339 LRP2P98164 4655 aa10.6□□□□□ -0.71
SPSB3-208ENST00000566339 C10orf95Q9H7T3 257 aa10.49□□□□□ -0.73
SPSB3-208ENST00000566339 KRTAP15-1Q3LI76 137 aa10.46□□□□□ -0.74
SPSB3-208ENST00000566339 LPAP08519 4548 aa10.45□□□□□ -0.74
SPSB3-208ENST00000566339 RNF213Q63HN8 5207 aa10.43□□□□□ -0.74
SPSB3-208ENST00000566339 R4GN34 69 aa10.22□□□□□ -0.77
SPSB3-208ENST00000566339 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
SPSB3-208ENST00000566339 MUC2Q02817 5179 aa10.15□□□□□ -0.78
SPSB3-208ENST00000566339 NDUFAF8A1L188 74 aa10.14□□□□□ -0.79
SPSB3-208ENST00000566339 PP632Q6XCG6 107 aa9.98□□□□□ -0.81
SPSB3-208ENST00000566339 MUC17Q685J3 4493 aa9.97□□□□□ -0.81
SPSB3-208ENST00000566339 KRTAP4-1Q9BYQ7 146 aa9.9□□□□□ -0.82
SPSB3-208ENST00000566339 PLAC4Q8WY50 150 aa9.89□□□□□ -0.83
SPSB3-208ENST00000566339 LORP23490 312 aaPredicted RBP9.86□□□□□ -0.83
SPSB3-208ENST00000566339 KRTAP19-2Q3LHN2 52 aa9.85□□□□□ -0.83
SPSB3-208ENST00000566339 FAT4Q6V0I7 4981 aa9.81□□□□□ -0.84
SPSB3-208ENST00000566339 CAMK2N1Q7Z7J9 78 aa9.72□□□□□ -0.85
SPSB3-208ENST00000566339 KRTAP23-1A1A580 65 aa9.7□□□□□ -0.86
SPSB3-208ENST00000566339 LUZP6Q538Z0 58 aa9.56□□□□□ -0.88
SPSB3-208ENST00000566339 LCE2AQ5TA79 106 aaPredicted RBP9.54□□□□□ -0.88
SPSB3-208ENST00000566339 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
SPSB3-208ENST00000566339 TNP1P09430 55 aa9.5□□□□□ -0.89
SPSB3-208ENST00000566339 SPRR5A0A1B0GTR4 108 aa9.32□□□□□ -0.92
SPSB3-208ENST00000566339 LCE2CQ5TA81 110 aa9.31□□□□□ -0.92
SPSB3-208ENST00000566339 A0A0A0MQY5 61 aa9.29□□□□□ -0.92
SPSB3-208ENST00000566339 KRTAP9-2Q9BYQ4 174 aa9.28□□□□□ -0.92
SPSB3-208ENST00000566339 SPRR2GQ9BYE4 73 aa9.21□□□□□ -0.94
SPSB3-208ENST00000566339 MT1HP80294 61 aa9.2□□□□□ -0.94
SPSB3-208ENST00000566339 M0R2T5 61 aa9.09□□□□□ -0.95
SPSB3-208ENST00000566339 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
SPSB3-208ENST00000566339 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
SPSB3-208ENST00000566339 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
SPSB3-208ENST00000566339 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
SPSB3-208ENST00000566339 LCE3AQ5TA76 89 aa8.81□□□□□ -1
SPSB3-208ENST00000566339 MT2AP02795 61 aa8.8□□□□□ -1
SPSB3-208ENST00000566339 KRTAP19-8Q3LI54 63 aa8.79□□□□□ -1
SPSB3-208ENST00000566339 KRTAP8-1Q8IUC2 63 aa8.78□□□□□ -1
SPSB3-208ENST00000566339 CRCT1Q9UGL9 99 aa8.78□□□□□ -1
SPSB3-208ENST00000566339 MT1FP04733 61 aa8.77□□□□□ -1.01
SPSB3-208ENST00000566339 KRTAP9-8Q9BYQ0 159 aa8.74□□□□□ -1.01
SPSB3-208ENST00000566339 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
SPSB3-208ENST00000566339 USH2AO75445 5202 aa8.6□□□□□ -1.03
SPSB3-208ENST00000566339 SSPOA2VEC9 5147 aa8.54□□□□□ -1.04
SPSB3-208ENST00000566339 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
SPSB3-208ENST00000566339 MT1BP07438 61 aa8.53□□□□□ -1.04
SPSB3-208ENST00000566339 MT1XP80297 61 aa8.5□□□□□ -1.05
SPSB3-208ENST00000566339 INE1O15225 51 aa8.5□□□□□ -1.05
SPSB3-208ENST00000566339 KRTAP12-3P60328 96 aa8.46□□□□□ -1.05
SPSB3-208ENST00000566339 KRTAP10-12P60413 245 aa8.46□□□□□ -1.05
SPSB3-208ENST00000566339 PRO2289Q9P1D8 64 aa8.45□□□□□ -1.06
SPSB3-208ENST00000566339 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
SPSB3-208ENST00000566339 LCE2BO14633 110 aa8.4□□□□□ -1.07
SPSB3-208ENST00000566339 FCGBPQ9Y6R7 5405 aaPredicted RBP8.29□□□□□ -1.08
SPSB3-208ENST00000566339 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
SPSB3-208ENST00000566339 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.17□□□□□ -1.1
SPSB3-208ENST00000566339 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
SPSB3-208ENST00000566339 KRTAP19-6Q3LI70 58 aa8.06□□□□□ -1.12
SPSB3-208ENST00000566339 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
SPSB3-208ENST00000566339 KRTAP9-7A8MTY7 169 aa8.05□□□□□ -1.12
SPSB3-208ENST00000566339 LCE3CQ5T5A8 94 aa8□□□□□ -1.13
SPSB3-208ENST00000566339 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
SPSB3-208ENST00000566339 KRTAP19-5Q3LI72 72 aa7.94□□□□□ -1.14
SPSB3-208ENST00000566339 KRTAP6-3Q3LI67 103 aa7.62□□□□□ -1.19
SPSB3-208ENST00000566339 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms