RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 PRAC1Q96KF2 57 aa10.4□□□□□ -0.74
MSLN-205ENST00000563941 KIAA1109Q2LD37 5005 aa10.39□□□□□ -0.75
MSLN-205ENST00000563941 XP32Q5T750 250 aa10.39□□□□□ -0.75
MSLN-205ENST00000563941 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
MSLN-205ENST00000563941 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
MSLN-205ENST00000563941 EPPK1P58107 5090 aaKnown RBP10.33□□□□□ -0.76
MSLN-205ENST00000563941 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
MSLN-205ENST00000563941 MT1HL1P0DM35 61 aa10.27□□□□□ -0.77
MSLN-205ENST00000563941 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
MSLN-205ENST00000563941 S4R3F8 94 aa10.17□□□□□ -0.78
MSLN-205ENST00000563941 KRTAP10-6P60371 365 aaPredicted RBP10.12□□□□□ -0.79
MSLN-205ENST00000563941 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
MSLN-205ENST00000563941 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
MSLN-205ENST00000563941 K7ERS5 55 aa10.04□□□□□ -0.8
MSLN-205ENST00000563941 TPRXLQ17RH7 258 aa10.03□□□□□ -0.8
MSLN-205ENST00000563941 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
MSLN-205ENST00000563941 LINC01554Q52M75 96 aa10.01□□□□□ -0.81
MSLN-205ENST00000563941 KRTAP13-4Q3LI77 160 aa10.01□□□□□ -0.81
MSLN-205ENST00000563941 P0C880 135 aa9.94□□□□□ -0.82
MSLN-205ENST00000563941 LPAP08519 4548 aa9.94□□□□□ -0.82
MSLN-205ENST00000563941 LRP2P98164 4655 aa9.93□□□□□ -0.82
MSLN-205ENST00000563941 A0A0D9SG42 100 aa9.91□□□□□ -0.82
MSLN-205ENST00000563941 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
MSLN-205ENST00000563941 ABCA13Q86UQ4 5058 aa9.85□□□□□ -0.83
MSLN-205ENST00000563941 ROMO1P60602 79 aa9.8□□□□□ -0.84
MSLN-205ENST00000563941 HERC2O95714 4834 aa9.75□□□□□ -0.85
MSLN-205ENST00000563941 CRIPTQ9P021 101 aa9.74□□□□□ -0.85
MSLN-205ENST00000563941 BIRC6Q9NR09 4857 aa9.69□□□□□ -0.86
MSLN-205ENST00000563941 J3QL48 77 aa9.68□□□□□ -0.86
MSLN-205ENST00000563941 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
MSLN-205ENST00000563941 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.86
MSLN-205ENST00000563941 M0QZ58 72 aa9.63□□□□□ -0.87
MSLN-205ENST00000563941 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
MSLN-205ENST00000563941 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
MSLN-205ENST00000563941 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
MSLN-205ENST00000563941 KRTAP4-1Q9BYQ7 146 aa9.53□□□□□ -0.88
MSLN-205ENST00000563941 C10orf95Q9H7T3 257 aa9.43□□□□□ -0.9
MSLN-205ENST00000563941 R4GN34 69 aa9.42□□□□□ -0.9
MSLN-205ENST00000563941 KRTAP19-2Q3LHN2 52 aa9.35□□□□□ -0.91
MSLN-205ENST00000563941 PCLOQ9Y6V0 5065 aa9.34□□□□□ -0.91
MSLN-205ENST00000563941 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
MSLN-205ENST00000563941 HERC1Q15751 4861 aa9.3□□□□□ -0.92
MSLN-205ENST00000563941 H3BS24 57 aa9.24□□□□□ -0.93
MSLN-205ENST00000563941 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
MSLN-205ENST00000563941 MUC2Q02817 5179 aa9.18□□□□□ -0.94
MSLN-205ENST00000563941 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
MSLN-205ENST00000563941 KRTAP15-1Q3LI76 137 aa8.96□□□□□ -0.97
MSLN-205ENST00000563941 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
MSLN-205ENST00000563941 LCE2CQ5TA81 110 aa8.83□□□□□ -1
MSLN-205ENST00000563941 UBR4Q5T4S7 5183 aa8.79□□□□□ -1
MSLN-205ENST00000563941 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
MSLN-205ENST00000563941 FAT4Q6V0I7 4981 aa8.73□□□□□ -1.01
MSLN-205ENST00000563941 PP632Q6XCG6 107 aa8.71□□□□□ -1.01
MSLN-205ENST00000563941 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
MSLN-205ENST00000563941 PLAC4Q8WY50 150 aa8.65□□□□□ -1.03
MSLN-205ENST00000563941 M0R2T5 61 aa8.62□□□□□ -1.03
MSLN-205ENST00000563941 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
MSLN-205ENST00000563941 MT1HP80294 61 aa8.6□□□□□ -1.03
MSLN-205ENST00000563941 TNP1P09430 55 aa8.59□□□□□ -1.03
MSLN-205ENST00000563941 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
MSLN-205ENST00000563941 KRTAP23-1A1A580 65 aa8.46□□□□□ -1.06
MSLN-205ENST00000563941 MT2AP02795 61 aa8.44□□□□□ -1.06
MSLN-205ENST00000563941 MT1FP04733 61 aa8.44□□□□□ -1.06
MSLN-205ENST00000563941 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
MSLN-205ENST00000563941 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
MSLN-205ENST00000563941 KRTAP19-8Q3LI54 63 aa8.25□□□□□ -1.09
MSLN-205ENST00000563941 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
MSLN-205ENST00000563941 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
MSLN-205ENST00000563941 MT1BP07438 61 aa8.14□□□□□ -1.11
MSLN-205ENST00000563941 SPRR5A0A1B0GTR4 108 aa8.09□□□□□ -1.11
MSLN-205ENST00000563941 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
MSLN-205ENST00000563941 MT1XP80297 61 aa8.06□□□□□ -1.12
MSLN-205ENST00000563941 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
MSLN-205ENST00000563941 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
MSLN-205ENST00000563941 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
MSLN-205ENST00000563941 KRTAP10-12P60413 245 aa7.88□□□□□ -1.15
MSLN-205ENST00000563941 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
MSLN-205ENST00000563941 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
MSLN-205ENST00000563941 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
MSLN-205ENST00000563941 LCE2BO14633 110 aa7.73□□□□□ -1.17
MSLN-205ENST00000563941 A0A0A0MQY5 61 aa7.7□□□□□ -1.18
MSLN-205ENST00000563941 USH2AO75445 5202 aa7.56□□□□□ -1.2
MSLN-205ENST00000563941 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
MSLN-205ENST00000563941 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
MSLN-205ENST00000563941 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
MSLN-205ENST00000563941 KMT2DO14686 5537 aa7.32□□□□□ -1.24
MSLN-205ENST00000563941 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
MSLN-205ENST00000563941 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
MSLN-205ENST00000563941 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
MSLN-205ENST00000563941 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
MSLN-205ENST00000563941 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
MSLN-205ENST00000563941 KRTAP19-6Q3LI70 58 aa7.1□□□□□ -1.27
MSLN-205ENST00000563941 KRTAP9-6A8MVA2 160 aa7.03□□□□□ -1.28
MSLN-205ENST00000563941 INE1O15225 51 aa7.01□□□□□ -1.29
MSLN-205ENST00000563941 MT1EP04732 61 aa6.98□□□□□ -1.29
MSLN-205ENST00000563941 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
MSLN-205ENST00000563941 MT1LQ93083 61 aa6.97□□□□□ -1.29
MSLN-205ENST00000563941 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
MSLN-205ENST00000563941 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
MSLN-205ENST00000563941 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms