RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
SMG1-209ENST00000563836 C9orf92A6NGG3 77 aa4.54□□□□□ -1.68
SMG1-209ENST00000563836 H3BPC8 53 aa4.53□□□□□ -1.68
SMG1-209ENST00000563836 SERP1Q9Y6X1 66 aa4.53□□□□□ -1.68
SMG1-209ENST00000563836 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
SMG1-209ENST00000563836 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
SMG1-209ENST00000563836 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
SMG1-209ENST00000563836 H0Y9P7 68 aa4.51□□□□□ -1.69
SMG1-209ENST00000563836 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
SMG1-209ENST00000563836 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
SMG1-209ENST00000563836 ATP11AUNQ6ZP68 121 aa4.5□□□□□ -1.69
SMG1-209ENST00000563836 LCA10Q71F78 164 aa4.5□□□□□ -1.69
SMG1-209ENST00000563836 C20orf197Q8N268 126 aa4.49□□□□□ -1.69
SMG1-209ENST00000563836 NDUFC1O43677 76 aa4.48□□□□□ -1.69
SMG1-209ENST00000563836 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
SMG1-209ENST00000563836 ATP5EP56381 51 aaPredicted RBP4.47□□□□□ -1.69
SMG1-209ENST00000563836 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
SMG1-209ENST00000563836 LINC00208Q96KT6 92 aa4.47□□□□□ -1.69
SMG1-209ENST00000563836 A8MUN3 132 aa4.46□□□□□ -1.7
SMG1-209ENST00000563836 A8MUU9 505 aa4.46□□□□□ -1.7
SMG1-209ENST00000563836 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
SMG1-209ENST00000563836 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
SMG1-209ENST00000563836 BIRC6Q9NR09 4857 aa4.45□□□□□ -1.7
SMG1-209ENST00000563836 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
SMG1-209ENST00000563836 ZCCHC13Q8WW36 166 aaKnown RBP4.45□□□□□ -1.7
SMG1-209ENST00000563836 KLKP1Q107X0 134 aa4.44□□□□□ -1.7
SMG1-209ENST00000563836 SNURFQ9Y675 71 aa4.44□□□□□ -1.7
SMG1-209ENST00000563836 RPL37P61927 97 aaKnown RBP4.43□□□□□ -1.7
SMG1-209ENST00000563836 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
SMG1-209ENST00000563836 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
SMG1-209ENST00000563836 C7orf65Q6ZTY9 151 aa4.42□□□□□ -1.7
SMG1-209ENST00000563836 Q5W150 140 aa4.4□□□□□ -1.71
SMG1-209ENST00000563836 TNXBP22105 4242 aa4.4□□□□□ -1.71
SMG1-209ENST00000563836 PCOTHQ58A44 107 aa4.38□□□□□ -1.71
SMG1-209ENST00000563836 CYP4F30PQ9H0H9 118 aa4.36□□□□□ -1.71
SMG1-209ENST00000563836 HERC2O95714 4834 aa4.35□□□□□ -1.71
SMG1-209ENST00000563836 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
SMG1-209ENST00000563836 SPINK7P58062 85 aa4.34□□□□□ -1.71
SMG1-209ENST00000563836 SPANXA2-OT1Q8N9U9 137 aa4.34□□□□□ -1.71
SMG1-209ENST00000563836 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
SMG1-209ENST00000563836 H7BZZ5 65 aa4.33□□□□□ -1.72
SMG1-209ENST00000563836 HRES1P13985 223 aa4.3□□□□□ -1.72
SMG1-209ENST00000563836 ACYP2P14621 99 aa4.29□□□□□ -1.72
SMG1-209ENST00000563836 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
SMG1-209ENST00000563836 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
SMG1-209ENST00000563836 CYSTM1Q9H1C7 97 aa4.26□□□□□ -1.73
SMG1-209ENST00000563836 A8MU10 97 aa4.24□□□□□ -1.73
SMG1-209ENST00000563836 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
SMG1-209ENST00000563836 Q1T7F1 81 aa4.23□□□□□ -1.73
SMG1-209ENST00000563836 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
SMG1-209ENST00000563836 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
SMG1-209ENST00000563836 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
SMG1-209ENST00000563836 A6NN06 94 aa4.19□□□□□ -1.74
SMG1-209ENST00000563836 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
SMG1-209ENST00000563836 COA5Q86WW8 74 aa4.19□□□□□ -1.74
SMG1-209ENST00000563836 K7ERS5 55 aa4.16□□□□□ -1.74
SMG1-209ENST00000563836 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
SMG1-209ENST00000563836 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
SMG1-209ENST00000563836 S4R3F8 94 aa4.15□□□□□ -1.75
SMG1-209ENST00000563836 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
SMG1-209ENST00000563836 LPAP08519 4548 aa4.13□□□□□ -1.75
SMG1-209ENST00000563836 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
SMG1-209ENST00000563836 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
SMG1-209ENST00000563836 LRP2P98164 4655 aa4.08□□□□□ -1.76
SMG1-209ENST00000563836 CSAG1Q6PB30 78 aa4.08□□□□□ -1.76
SMG1-209ENST00000563836 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
SMG1-209ENST00000563836 MUC17Q685J3 4493 aa4.05□□□□□ -1.76
SMG1-209ENST00000563836 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
SMG1-209ENST00000563836 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
SMG1-209ENST00000563836 A0A1B0GU69 56 aa4.04□□□□□ -1.76
SMG1-209ENST00000563836 M0R2T5 61 aa4.02□□□□□ -1.77
SMG1-209ENST00000563836 LINC01558Q9Y6Z2 57 aa4.01□□□□□ -1.77
SMG1-209ENST00000563836 HERC1Q15751 4861 aa4.01□□□□□ -1.77
SMG1-209ENST00000563836 A6NED7 52 aa4□□□□□ -1.77
SMG1-209ENST00000563836 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
SMG1-209ENST00000563836 ROMO1P60602 79 aa3.99□□□□□ -1.77
SMG1-209ENST00000563836 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
SMG1-209ENST00000563836 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
SMG1-209ENST00000563836 Q5VV11 94 aa3.93□□□□□ -1.78
SMG1-209ENST00000563836 H0YAA0 97 aa3.92□□□□□ -1.78
SMG1-209ENST00000563836 ADM2Q7Z4H4 148 aa3.92□□□□□ -1.78
SMG1-209ENST00000563836 UQCR11O14957 56 aa3.91□□□□□ -1.78
SMG1-209ENST00000563836 A0A1B0GU33 70 aa3.9□□□□□ -1.79
SMG1-209ENST00000563836 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
SMG1-209ENST00000563836 MT1HP80294 61 aa3.86□□□□□ -1.79
SMG1-209ENST00000563836 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
SMG1-209ENST00000563836 R4GN34 69 aa3.85□□□□□ -1.79
SMG1-209ENST00000563836 M0QZ58 72 aa3.84□□□□□ -1.79
SMG1-209ENST00000563836 CRIPTQ9P021 101 aa3.84□□□□□ -1.79
SMG1-209ENST00000563836 MUC2Q02817 5179 aa3.83□□□□□ -1.8
SMG1-209ENST00000563836 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
SMG1-209ENST00000563836 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
SMG1-209ENST00000563836 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
SMG1-209ENST00000563836 P0C880 135 aa3.8□□□□□ -1.8
SMG1-209ENST00000563836 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
SMG1-209ENST00000563836 KRTAP10-10P60014 251 aa3.78□□□□□ -1.8
SMG1-209ENST00000563836 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
SMG1-209ENST00000563836 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
SMG1-209ENST00000563836 A0A0D9SG42 100 aa3.73□□□□□ -1.81
SMG1-209ENST00000563836 SPINT4Q6UDR6 99 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms