RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
CMTM3-206ENST00000563672 FAM236AA0A1B0GUQ0 79 aa9.28□□□□□ -0.92
CMTM3-206ENST00000563672 FAM236BA0A1B0GV22 79 aa9.28□□□□□ -0.92
CMTM3-206ENST00000563672 A8MUN3 132 aa9.27□□□□□ -0.93
CMTM3-206ENST00000563672 H3BPC8 53 aa9.26□□□□□ -0.93
CMTM3-206ENST00000563672 MT-ATP8P03928 68 aa9.25□□□□□ -0.93
CMTM3-206ENST00000563672 KRTAP19-6Q3LI70 58 aa9.23□□□□□ -0.93
CMTM3-206ENST00000563672 NDUFC1O43677 76 aa9.19□□□□□ -0.94
CMTM3-206ENST00000563672 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
CMTM3-206ENST00000563672 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
CMTM3-206ENST00000563672 H0YAA0 97 aa9.1□□□□□ -0.95
CMTM3-206ENST00000563672 TRAV7A0A075B6U4 112 aa9.09□□□□□ -0.95
CMTM3-206ENST00000563672 SMIM20Q8N5G0 67 aa9.09□□□□□ -0.95
CMTM3-206ENST00000563672 KRTAP19-8Q3LI54 63 aa9.08□□□□□ -0.96
CMTM3-206ENST00000563672 DMAC1Q96GE9 116 aa9.07□□□□□ -0.96
CMTM3-206ENST00000563672 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
CMTM3-206ENST00000563672 MT1BP07438 61 aa9.05□□□□□ -0.96
CMTM3-206ENST00000563672 Q5VV11 94 aa9.02□□□□□ -0.97
CMTM3-206ENST00000563672 MACF1Q9UPN3 7388 aaKnown RBP9.01□□□□□ -0.97
CMTM3-206ENST00000563672 KRTAP9-7A8MTY7 169 aa8.98□□□□□ -0.97
CMTM3-206ENST00000563672 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
CMTM3-206ENST00000563672 SYNE2Q8WXH0 6885 aaKnown RBP8.93□□□□□ -0.98
CMTM3-206ENST00000563672 ACYP2P14621 99 aa8.87□□□□□ -0.99
CMTM3-206ENST00000563672 SNURFQ9Y675 71 aa8.86□□□□□ -0.99
CMTM3-206ENST00000563672 SERP2Q8N6R1 65 aa8.85□□□□□ -0.99
CMTM3-206ENST00000563672 A6NN06 94 aa8.84□□□□□ -0.99
CMTM3-206ENST00000563672 P0C880 135 aa8.81□□□□□ -1
CMTM3-206ENST00000563672 KRTAP10-5P60370 271 aa8.8□□□□□ -1
CMTM3-206ENST00000563672 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
CMTM3-206ENST00000563672 C20orf197Q8N268 126 aa8.79□□□□□ -1
CMTM3-206ENST00000563672 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
CMTM3-206ENST00000563672 SPTSSBQ8NFR3 76 aa8.72□□□□□ -1.01
CMTM3-206ENST00000563672 R4GN34 69 aa8.72□□□□□ -1.01
CMTM3-206ENST00000563672 CHKB-CPT1BH3BT56 60 aa8.68□□□□□ -1.02
CMTM3-206ENST00000563672 M0QZ58 72 aa8.66□□□□□ -1.02
CMTM3-206ENST00000563672 KRTAP6-3Q3LI67 103 aa8.65□□□□□ -1.02
CMTM3-206ENST00000563672 COX7CP15954 63 aa8.61□□□□□ -1.03
CMTM3-206ENST00000563672 PLAC4Q8WY50 150 aa8.59□□□□□ -1.03
CMTM3-206ENST00000563672 MT1XP80297 61 aa8.53□□□□□ -1.04
CMTM3-206ENST00000563672 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
CMTM3-206ENST00000563672 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
CMTM3-206ENST00000563672 COA5Q86WW8 74 aa8.48□□□□□ -1.05
CMTM3-206ENST00000563672 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
CMTM3-206ENST00000563672 H7BZZ5 65 aa8.46□□□□□ -1.06
CMTM3-206ENST00000563672 NEBP20929 6669 aa8.4□□□□□ -1.06
CMTM3-206ENST00000563672 ANAPC13Q9BS18 74 aa8.38□□□□□ -1.07
CMTM3-206ENST00000563672 MUC12Q9UKN1 5478 aa8.37□□□□□ -1.07
CMTM3-206ENST00000563672 KRTAP5-9P26371 169 aa8.34□□□□□ -1.07
CMTM3-206ENST00000563672 KMT2DO14686 5537 aa8.33□□□□□ -1.08
CMTM3-206ENST00000563672 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
CMTM3-206ENST00000563672 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
CMTM3-206ENST00000563672 SEC61GP60059 68 aa8.24□□□□□ -1.09
CMTM3-206ENST00000563672 CCDC179H3BU77 68 aa8.23□□□□□ -1.09
CMTM3-206ENST00000563672 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
CMTM3-206ENST00000563672 MDN1Q9NU22 5596 aa8.21□□□□□ -1.1
CMTM3-206ENST00000563672 KRTAP10-7P60409 375 aaPredicted RBP8.13□□□□□ -1.11
CMTM3-206ENST00000563672 KRTAP8-1Q8IUC2 63 aa8.12□□□□□ -1.11
CMTM3-206ENST00000563672 A0A1B0GU33 70 aa8.11□□□□□ -1.11
CMTM3-206ENST00000563672 KRTAP10-12P60413 245 aa8.11□□□□□ -1.11
CMTM3-206ENST00000563672 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.11
CMTM3-206ENST00000563672 SPRR2FQ96RM1 72 aa8.09□□□□□ -1.11
CMTM3-206ENST00000563672 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
CMTM3-206ENST00000563672 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
CMTM3-206ENST00000563672 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
CMTM3-206ENST00000563672 A0A0D9SG42 100 aa8.04□□□□□ -1.12
CMTM3-206ENST00000563672 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
CMTM3-206ENST00000563672 A0A1B0GU69 56 aa8.03□□□□□ -1.12
CMTM3-206ENST00000563672 SPRR2EP22531 72 aa7.93□□□□□ -1.14
CMTM3-206ENST00000563672 SPRR2BP35325 72 aa7.93□□□□□ -1.14
CMTM3-206ENST00000563672 SPRR2AP35326 72 aa7.93□□□□□ -1.14
CMTM3-206ENST00000563672 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
CMTM3-206ENST00000563672 TMEM258P61165 79 aa7.92□□□□□ -1.14
CMTM3-206ENST00000563672 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
CMTM3-206ENST00000563672 KRTAP20-1Q3LI63 56 aa7.88□□□□□ -1.15
CMTM3-206ENST00000563672 LCE1AQ5T7P2 110 aa7.88□□□□□ -1.15
CMTM3-206ENST00000563672 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
CMTM3-206ENST00000563672 LINC01558Q9Y6Z2 57 aa7.84□□□□□ -1.15
CMTM3-206ENST00000563672 PRR15LQ9BU68 103 aa7.83□□□□□ -1.16
CMTM3-206ENST00000563672 A8MU10 97 aa7.82□□□□□ -1.16
CMTM3-206ENST00000563672 KRTAP2-3P0C7H8 128 aa7.76□□□□□ -1.17
CMTM3-206ENST00000563672 KRTAP2-4Q9BYR9 128 aa7.76□□□□□ -1.17
CMTM3-206ENST00000563672 SPRR2DP22532 72 aa7.66□□□□□ -1.18
CMTM3-206ENST00000563672 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
CMTM3-206ENST00000563672 UQCR11O14957 56 aa7.6□□□□□ -1.19
CMTM3-206ENST00000563672 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
CMTM3-206ENST00000563672 MT1EP04732 61 aa7.54□□□□□ -1.2
CMTM3-206ENST00000563672 KRTAP2-2Q9BYT5 123 aa7.51□□□□□ -1.21
CMTM3-206ENST00000563672 KRTAP2-1Q9BYU5 128 aa7.51□□□□□ -1.21
CMTM3-206ENST00000563672 TNP1P09430 55 aa7.47□□□□□ -1.21
CMTM3-206ENST00000563672 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
CMTM3-206ENST00000563672 V9GYY9 64 aa7.46□□□□□ -1.22
CMTM3-206ENST00000563672 LCE5AQ5TCM9 118 aa7.45□□□□□ -1.22
CMTM3-206ENST00000563672 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
CMTM3-206ENST00000563672 Q1T7F1 81 aa7.44□□□□□ -1.22
CMTM3-206ENST00000563672 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
CMTM3-206ENST00000563672 KRTAP19-3Q7Z4W3 81 aa7.44□□□□□ -1.22
CMTM3-206ENST00000563672 PSPHP1O15172 72 aa7.39□□□□□ -1.23
CMTM3-206ENST00000563672 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
CMTM3-206ENST00000563672 MT1GP13640 62 aa7.29□□□□□ -1.24
CMTM3-206ENST00000563672 DSTQ03001 7570 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms