RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KLKP1Q107X0 134 aa12.86□□□□□ -0.35
NME3-203ENST00000563367 MP68P56378 58 aa12.81□□□□□ -0.36
NME3-203ENST00000563367 KRTAP9-7A8MTY7 169 aa12.77□□□□□ -0.37
NME3-203ENST00000563367 SPRR2GQ9BYE4 73 aa12.74□□□□□ -0.37
NME3-203ENST00000563367 A8MUN3 132 aa12.72□□□□□ -0.37
NME3-203ENST00000563367 NDUFC1O43677 76 aa12.69□□□□□ -0.38
NME3-203ENST00000563367 MACF1Q9UPN3 7388 aaKnown RBP12.69□□□□□ -0.38
NME3-203ENST00000563367 SCGB1A1P11684 91 aa12.67□□□□□ -0.38
NME3-203ENST00000563367 MT1BP07438 61 aa12.66□□□□□ -0.38
NME3-203ENST00000563367 H3BPC8 53 aa12.64□□□□□ -0.39
NME3-203ENST00000563367 KRTAP19-8Q3LI54 63 aa12.64□□□□□ -0.39
NME3-203ENST00000563367 IMUPQ9GZP8 106 aa12.63□□□□□ -0.39
NME3-203ENST00000563367 Q5VV11 94 aa12.6□□□□□ -0.39
NME3-203ENST00000563367 MT-ATP8P03928 68 aa12.59□□□□□ -0.39
NME3-203ENST00000563367 H0YAA0 97 aa12.55□□□□□ -0.4
NME3-203ENST00000563367 K7ERU9 68 aa12.55□□□□□ -0.4
NME3-203ENST00000563367 CRIPTQ9P021 101 aa12.53□□□□□ -0.4
NME3-203ENST00000563367 SYNE2Q8WXH0 6885 aaKnown RBP12.52□□□□□ -0.4
NME3-203ENST00000563367 ADM2Q7Z4H4 148 aa12.46□□□□□ -0.41
NME3-203ENST00000563367 DMAC1Q96GE9 116 aa12.46□□□□□ -0.41
NME3-203ENST00000563367 A6NN06 94 aa12.4□□□□□ -0.42
NME3-203ENST00000563367 TRAV7A0A075B6U4 112 aa12.38□□□□□ -0.43
NME3-203ENST00000563367 SMIM20Q8N5G0 67 aa12.34□□□□□ -0.43
NME3-203ENST00000563367 KRTAP10-5P60370 271 aa12.31□□□□□ -0.44
NME3-203ENST00000563367 P0C880 135 aa12.22□□□□□ -0.45
NME3-203ENST00000563367 KRTAP6-3Q3LI67 103 aa12.19□□□□□ -0.46
NME3-203ENST00000563367 ACYP2P14621 99 aa12.16□□□□□ -0.46
NME3-203ENST00000563367 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
NME3-203ENST00000563367 SNURFQ9Y675 71 aa12.14□□□□□ -0.47
NME3-203ENST00000563367 C20orf197Q8N268 126 aa12.1□□□□□ -0.47
NME3-203ENST00000563367 R4GN34 69 aa12.09□□□□□ -0.47
NME3-203ENST00000563367 M0QZ58 72 aa12.02□□□□□ -0.49
NME3-203ENST00000563367 SERP2Q8N6R1 65 aa12.01□□□□□ -0.49
NME3-203ENST00000563367 SPTSSBQ8NFR3 76 aa11.95□□□□□ -0.5
NME3-203ENST00000563367 PLAC4Q8WY50 150 aa11.94□□□□□ -0.5
NME3-203ENST00000563367 CHKB-CPT1BH3BT56 60 aa11.92□□□□□ -0.5
NME3-203ENST00000563367 SPANXA2-OT1Q8N9U9 137 aa11.92□□□□□ -0.5
NME3-203ENST00000563367 MT1XP80297 61 aa11.91□□□□□ -0.5
NME3-203ENST00000563367 LINC01554Q52M75 96 aa11.85□□□□□ -0.51
NME3-203ENST00000563367 PRO2289Q9P1D8 64 aa11.84□□□□□ -0.51
NME3-203ENST00000563367 NEBP20929 6669 aa11.74□□□□□ -0.53
NME3-203ENST00000563367 KRTAP5-9P26371 169 aa11.71□□□□□ -0.53
NME3-203ENST00000563367 MUC12Q9UKN1 5478 aa11.68□□□□□ -0.54
NME3-203ENST00000563367 COX7CP15954 63 aa11.67□□□□□ -0.54
NME3-203ENST00000563367 KMT2DO14686 5537 aa11.61□□□□□ -0.55
NME3-203ENST00000563367 COA5Q86WW8 74 aa11.6□□□□□ -0.55
NME3-203ENST00000563367 CYSTM1Q9H1C7 97 aa11.56□□□□□ -0.56
NME3-203ENST00000563367 KRTAP12-2P59991 146 aa11.54□□□□□ -0.56
NME3-203ENST00000563367 H7BZZ5 65 aa11.5□□□□□ -0.57
NME3-203ENST00000563367 KRTAP13-4Q3LI77 160 aa11.5□□□□□ -0.57
NME3-203ENST00000563367 KRTAP8-1Q8IUC2 63 aa11.4□□□□□ -0.58
NME3-203ENST00000563367 SPRR2FQ96RM1 72 aa11.4□□□□□ -0.58
NME3-203ENST00000563367 KRTAP10-7P60409 375 aaPredicted RBP11.37□□□□□ -0.59
NME3-203ENST00000563367 MDN1Q9NU22 5596 aa11.37□□□□□ -0.59
NME3-203ENST00000563367 KRTAP4-8A0A0G2JLE6 195 aa11.36□□□□□ -0.59
NME3-203ENST00000563367 KRTAP4-8Q9BYQ9 185 aa11.36□□□□□ -0.59
NME3-203ENST00000563367 ANAPC13Q9BS18 74 aa11.32□□□□□ -0.6
NME3-203ENST00000563367 KRTAP10-12P60413 245 aa11.29□□□□□ -0.6
NME3-203ENST00000563367 SEC61GP60059 68 aa11.28□□□□□ -0.6
NME3-203ENST00000563367 SERP1Q9Y6X1 66 aa11.27□□□□□ -0.61
NME3-203ENST00000563367 KRTAP20-1Q3LI63 56 aa11.2□□□□□ -0.62
NME3-203ENST00000563367 SPRR2EP22531 72 aa11.19□□□□□ -0.62
NME3-203ENST00000563367 SPRR2BP35325 72 aa11.19□□□□□ -0.62
NME3-203ENST00000563367 SPRR2AP35326 72 aa11.19□□□□□ -0.62
NME3-203ENST00000563367 CCDC179H3BU77 68 aa11.15□□□□□ -0.62
NME3-203ENST00000563367 SPATA8Q6RVD6 105 aa11.15□□□□□ -0.62
NME3-203ENST00000563367 CAMK2N1Q7Z7J9 78 aa11.13□□□□□ -0.63
NME3-203ENST00000563367 A0A0D9SG42 100 aa11.12□□□□□ -0.63
NME3-203ENST00000563367 A0A1B0GU33 70 aa11.12□□□□□ -0.63
NME3-203ENST00000563367 LCE1AQ5T7P2 110 aa11.09□□□□□ -0.63
NME3-203ENST00000563367 A0A1B0GU69 56 aa10.98□□□□□ -0.65
NME3-203ENST00000563367 KRTAP2-3P0C7H8 128 aa10.96□□□□□ -0.65
NME3-203ENST00000563367 KRTAP2-4Q9BYR9 128 aa10.96□□□□□ -0.65
NME3-203ENST00000563367 SPINT4Q6UDR6 99 aa10.94□□□□□ -0.66
NME3-203ENST00000563367 KRTAP12-1P59990 96 aa10.92□□□□□ -0.66
NME3-203ENST00000563367 ATP5EP56381 51 aaPredicted RBP10.88□□□□□ -0.67
NME3-203ENST00000563367 SPRR2DP22532 72 aa10.81□□□□□ -0.68
NME3-203ENST00000563367 SMIM26A0A096LP01 95 aa10.78□□□□□ -0.68
NME3-203ENST00000563367 A8MU10 97 aa10.77□□□□□ -0.69
NME3-203ENST00000563367 TMEM258P61165 79 aa10.67□□□□□ -0.7
NME3-203ENST00000563367 PRR15LQ9BU68 103 aa10.66□□□□□ -0.7
NME3-203ENST00000563367 LINC01558Q9Y6Z2 57 aa10.65□□□□□ -0.7
NME3-203ENST00000563367 KRTAP19-7Q3SYF9 63 aa10.64□□□□□ -0.71
NME3-203ENST00000563367 KRTAP2-2Q9BYT5 123 aa10.62□□□□□ -0.71
NME3-203ENST00000563367 KRTAP2-1Q9BYU5 128 aa10.62□□□□□ -0.71
NME3-203ENST00000563367 MT1EP04732 61 aa10.53□□□□□ -0.72
NME3-203ENST00000563367 LCE3BQ5TA77 95 aa10.51□□□□□ -0.73
NME3-203ENST00000563367 C10orf95Q9H7T3 257 aa10.45□□□□□ -0.74
NME3-203ENST00000563367 KRTAP19-5Q3LI72 72 aa10.41□□□□□ -0.74
NME3-203ENST00000563367 LCE5AQ5TCM9 118 aa10.41□□□□□ -0.74
NME3-203ENST00000563367 KRTAP19-3Q7Z4W3 81 aa10.39□□□□□ -0.75
NME3-203ENST00000563367 UQCR11O14957 56 aa10.33□□□□□ -0.76
NME3-203ENST00000563367 TNP1P09430 55 aa10.31□□□□□ -0.76
NME3-203ENST00000563367 LCE3AQ5TA76 89 aa10.25□□□□□ -0.77
NME3-203ENST00000563367 DSTQ03001 7570 aaKnown RBP10.2□□□□□ -0.78
NME3-203ENST00000563367 MT1GP13640 62 aa10.15□□□□□ -0.78
NME3-203ENST00000563367 MIR22HGQ0VDD5 57 aa10.13□□□□□ -0.79
NME3-203ENST00000563367 MT1LQ93083 61 aa10.09□□□□□ -0.79
NME3-203ENST00000563367 PSPHP1O15172 72 aa10.05□□□□□ -0.8
NME3-203ENST00000563367 V9GYY9 64 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms